Halobaculum rubrum: K6T25_04135
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Entry
K6T25_04135 CDS
T07963
Name
(GenBank) DNA-directed RNA polymerase subunit A'
KO
K03041
DNA-directed RNA polymerase subunit A' [EC:
2.7.7.6
]
Organism
hrm
Halobaculum rubrum
Pathway
hrm03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
hrm00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
K6T25_04135
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hrm03021
]
K6T25_04135
Enzymes [BR:
hrm01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
K6T25_04135
Transcription machinery [BR:
hrm03021
]
Prokaryotic type
Archaeal type
RNA polymerase
Core subunits
K6T25_04135
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_2
RNA_pol_Rpb1_4
RNA_pol_Rpb1_3
RNA_pol_Rpb1_5
HTH_3
Motif
Other DBs
NCBI-ProteinID:
QZY00294
LinkDB
All DBs
Position
786504..789455
Genome browser
AA seq
983 aa
AA seq
DB search
MAGQTPKEIGGINFGLMDPETYRDMSATKVITADTYDDDGYPIDMGLMDPRLGVIDPGLE
CRTCGKHSGSCNGHFGHIELAAPVIHVGFTKLIRRLLRATCRNCGRLALTEEEKDEYKEK
LVRTKDLGGDPTDVLKSAVRQARKASTCPHCGEPQADIKHEKPTTYYEVQDVLSGDYSEL
ITRAMQPDEPEDDDEEVDESEAMSPMDLADETGIALDRINEILSGEFRPRKEDRKALEKA
LGIDLTVEDMNKLMPSDIRDWFEDIPDEDLEPLGIHPQKSRPEWMILTVLPVPPVTTRPS
ITLDNGQRSEDDLTHKLVDIIRINQRFMENREAGAPQLIIEDLWELLQYHVTTFVDNEIS
GTPPARHRSGRPLKTLSQRLKGKEGRFRGSLSGKRVNFSARTVISPDPTLSLNEVGVPER
VAEEMTQVMNVAERNLDRARQYVRNGPEAHPGANYVKRPDGRRLKVTEKNCEELAEKVEP
GWEVNRHLVDGDIVIFNRQPSLHRMSIMAHEVVVMPYKTFRLNTTVCPPYNADFDGDEMN
MHALQNEEARAEARVLMRVQEQMLSPRFGENIIGAIQDHISGTYLLTHENPEFTETQALD
LLRATSVDELPEPDGTNEAGQAIWTGRTVFSELLPDDLNLEFTSSTGDIVRIENGQLVEG
TIDEDAVGAFGGEVVDTLTKVYSKTRARVFVNEVASLAMRAIMHFGFSLGIDDESIPPEA
TEQVDEAIDSAYERVQELISTYEGGDLESLPGRTIDETLEMKIMQTLGKARDSAGEIAED
HFADDNPAVIMARSGARGSMLNLTQMTGCVGQQAVRGERINRGYEDRTLAHYEADDLSAE
AHGFVENSYRSGLTPEEFFFHAMGGREGLVDTAVRTSKSGYLQRRLINALSELETQYDGT
VRDTSDTIVQFEFGEDGTSPVKVSSNEDTPIDIEQITDRVVDAEFGSEEEKERFLGRREA
PTNLSEYAGPGLDKAGGVGVSDD
NT seq
2952 nt
NT seq
+upstream
nt +downstream
nt
atggcaggccagacacccaaagagatcggcggcatcaacttcgggctgatggacccggag
acgtatcgagacatgtccgcgacgaaggtcatcaccgcggacacgtacgacgacgacggc
taccccatcgacatggggctgatggacccgcggctgggcgtcatcgacccgggactggag
tgccgcacctgcggcaaacactccgggtcctgtaacgggcacttcggccacatcgagctg
gcggcgcccgtcatccacgtcggcttcacgaagctcatccgtcggctgctgcgcgcgacg
tgccgcaactgcggccggctcgcgctcaccgaagaggagaaagacgagtacaaagagaag
ctcgtccgcacgaaggatctgggcggcgaccccaccgacgtgctgaagtcggcggtccga
caggcccgcaaggccagcacctgcccgcactgcggcgagccgcaggcggacatcaaacac
gagaagccgaccacctactacgaggtgcaggacgtgctctcgggcgactactcggagctc
atcacccgcgcgatgcagcccgacgagcccgaggacgacgacgaggaggtcgacgagagc
gaggcgatgtccccgatggatctcgccgacgagacgggcatcgcgctcgaccggatcaac
gagatcctctccggcgagttccgcccccgcaaggaggaccgcaaagcgctggagaaggcg
ctgggcatcgacctcaccgtcgaggacatgaacaagctgatgccgagcgacatccgcgac
tggttcgaggacatccccgacgaggacctcgaacccctcggcatccacccgcagaagtcc
cgccccgagtggatgatcctgacggtgctgccggtcccgccggtcaccacccgtccctcg
atcacgctggacaacggtcagcgctccgaggacgacctcacacacaagctggtcgacatc
atccggatcaaccagcggttcatggagaaccgcgaggccggcgccccgcagctcatcatc
gaggacctgtgggagctgctccagtaccacgtcaccaccttcgtcgacaacgagatctcg
ggcacgccgccggcgcgccaccgctccggtcgcccgctgaagacgctctcccagcgcctc
aagggcaaggagggtcgcttccgcggctccctgtcgggcaagcgcgtgaacttctccgcg
cggaccgtcatcagccccgaccccaccctctcgctgaacgaggtcggcgtccccgagcgg
gtcgccgaggagatgacacaggtgatgaacgtcgccgagcgcaacctcgaccgcgcccgg
cagtacgtccgcaacgggcccgaggcccaccccggcgccaactacgtcaagcggcccgac
ggccgccggctgaaggtaaccgagaagaactgcgaggagctggccgagaaggtcgagccg
ggctgggaggtcaaccgccacctggtcgacggcgacatcgtgatcttcaaccggcagccc
tcgctgcaccggatgtcgatcatggcccacgaggtcgtggtcatgccgtacaagacgttc
cggctgaacacgaccgtctgcccgccgtacaacgccgacttcgacggcgacgagatgaac
atgcacgcgctccaaaacgaggaggcgcgcgcggaggcgcgcgtcctcatgcgcgtgcaa
gagcagatgctctcgccacgcttcggcgagaacatcatcggcgccatccaggaccacatc
tcggggacgtacctcctcacccacgagaaccccgagttcaccgagacgcaggcgctggac
ctgctccgggccacctcggtcgacgagctgcccgagccggacggcaccaacgaggcgggc
caggcgatctggacgggtcgaaccgtcttctcggagctgctgcccgacgacctgaacctc
gagttcacctcctcgacgggcgacatcgtccgcatcgagaacggccagctcgtcgagggg
accatcgacgaggacgccgtcggcgcgttcggcggcgaggtcgtcgacaccctcacgaag
gtgtactcgaagacgcgtgcccgcgtgttcgtcaacgaggtggcgtcgctcgcgatgcgc
gccatcatgcacttcggcttctcgctgggtatcgacgacgagtcgatcccgccggaggcg
accgagcaggtcgacgaggcgatcgactcggcgtacgagcgggttcaggagctgatctcg
acgtacgaggggggcgatctggagagcctgcccggccggacgatcgacgagacgctggag
atgaagatcatgcagacgctcggcaaggcccgcgactccgcgggcgagatcgccgaggac
cacttcgccgacgacaacccggcggtcatcatggctcgctcgggcgcccgcgggtcgatg
ctgaacctgacccagatgacgggctgcgtcggccagcaggcggttcgcggcgagcgcatc
aaccgcggctacgaggaccgcacgctcgcgcactacgaggcggacgacctctcggcggag
gcccacggcttcgtggagaactcctaccgctcggggctcacccccgaggagttcttcttc
cacgcgatgggcggccgcgagggactggtcgacactgcggtccggacctcgaagtccggc
tacctgcagcgtcgcctcatcaacgcgctctcggaactggagacgcagtacgacggcacg
gttcgggacacctccgacaccatcgtccagttcgagttcggcgaggacggcacctcgccg
gtgaaagtgtcctccaacgaggacacccccatcgacatcgaacagatcaccgaccgcgtc
gtcgacgcggagttcggatccgaggaggagaaggagcgcttcctcggtcgccgcgaggcg
ccgacgaacctctcggagtacgccgggcccggcctcgacaaggcgggcggcgtgggggtg
agcgatgactga
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