Helobdella robusta: HELRODRAFT_162439
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Entry
HELRODRAFT_162439 CDS
T03272
Name
(RefSeq) hypothetical protein
KO
K13218
polypyrimidine tract-binding protein 1
Organism
hro
Helobdella robusta
Brite
KEGG Orthology (KO) [BR:
hro00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hro03019
]
HELRODRAFT_162439
03041 Spliceosome [BR:
hro03041
]
HELRODRAFT_162439
Messenger RNA biogenesis [BR:
hro03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Trans-acting binding proteins
HELRODRAFT_162439
Spliceosome [BR:
hro03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
HELRODRAFT_162439
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_5
RRM_1
RRM_occluded
P2
Motif
Other DBs
NCBI-GeneID:
20199583
NCBI-ProteinID:
XP_009022889
JGI:
Helro1_162439
UniProt:
T1ESN3
LinkDB
All DBs
Position
Unknown
AA seq
424 aa
AA seq
DB search
MPSQSTNNPGECQLLIQYATKLQAQKAKMMLDGHSMFPGCNKLKVEYSSLSDIDHNLSYS
QQNSRMLESNSQPLSYVQTSIDLDTLIQQQQQQQQQQLQLQSLQHLQLQQQHSQQQSQQQ
FSIVAPSTALIQAPATQVAEMVYSTGARAGGSVILAATSTALLNVGHVVLVSNLDEEKVN
PDALFTLFGVYGDVIKVKIMFNKKDTALIQFNDPMQAQTAMLNLDKLKLWGKVIKVTPSK
HTIVQMPKDGQFDINLTKDYTNSTLHRFKKPNSKNYNNIFPPAATLHLSNIPSTSKETLV
ALFSKHGTVVGFKFFTNVVSANKDCKMALMQMSSIEEAAWPSLRYISLIDIISLLRTIFS
STLNISVAISCVCVCACVITRETIRDLLGEYEAMHNYQLAETTHLRVSFSKSGYNIIIII
NNIL
NT seq
1275 nt
NT seq
+upstream
nt +downstream
nt
atgccgtcccaatcaaccaacaatccaggtgaatgtcaactcttgatccaatatgcaacc
aaattacaagcgcaaaaagcaaagatgatgttggacggacattcaatgttcccaggctgc
aacaaactgaaagttgagtattccagcctatctgacatagatcacaacctctcatactcg
caacaaaactcaagaatgttggagtccaactcacaaccattatcgtacgtacaaacatct
atcgatctggacacattaattcagcagcagcagcagcaacaacaacaacaattgcagtta
caatcacttcaacacctacagttgcagcaacaacattctcagcaacagtctcagcaacag
ttcagcattgttgccccttcaacggcgttaatacaagcacctgccacccaagttgctgaa
atggtttacagcacaggcgcaagagcaggtggtagcgtcatactggcggcaacttcgact
gcactgctcaacgtgggccacgttgttctcgtctccaacctcgacgaggagaaagtcaat
ccagatgctcttttcacattgttcggagtgtatggtgatgtgataaaagtgaagataatg
ttcaacaagaaggacacagcgctcatccagttcaatgatcccatgcaagctcagacagcc
atgttgaatctggacaagttgaagttgtggggcaaggtgataaaagtcactccgtccaag
cacaccatcgttcaaatgccaaaggatggacagtttgacatcaacctgacgaaggattac
accaactccacacttcatcgcttcaagaagcccaacagcaagaactacaacaacatcttc
ccgccagctgccaccctccacctctcgaacattccgtccacaagtaaggagacactggtg
gccttgttcagcaagcatggaacggtcgtcggcttcaagttcttcacaaacgtcgtgtcg
gccaacaaggactgcaagatggcgctcatgcagatgagttccatcgaggaagctgcttgg
ccctcattgcgctacataagtctcatcgacatcatctctctccttcgtactattttttca
tcaaccttaaatatctctgttgctatttcttgtgtgtgtgtgtgtgcgtgtgtgatcact
cgagaaacaattagagatctgctgggtgaatatgaagccatgcacaactaccagctggcc
gagaccactcatcttagagtttctttctctaaatctggctacaacatcatcatcatcatc
aacaacattctttga
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integrated database retrieval system
