Helobdella robusta: HELRODRAFT_194553
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Entry
HELRODRAFT_194553 CDS
T03272
Name
(RefSeq) hypothetical protein
KO
K06067
histone deacetylase 1/2 [EC:
3.5.1.98
]
Organism
hro
Helobdella robusta
Pathway
hro03082
ATP-dependent chromatin remodeling
hro03083
Polycomb repressive complex
hro04330
Notch signaling pathway
hro04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
hro00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
HELRODRAFT_194553
03083 Polycomb repressive complex
HELRODRAFT_194553
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
HELRODRAFT_194553
04350 TGF-beta signaling pathway
HELRODRAFT_194553
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
hro03036
]
HELRODRAFT_194553
Enzymes [BR:
hro01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
HELRODRAFT_194553
Chromosome and associated proteins [BR:
hro03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class I HDACs
HELRODRAFT_194553
HDAC complexes
Sin3A-HDAC complex
HELRODRAFT_194553
BRAF-HDAC complex
HELRODRAFT_194553
REST complex
HELRODRAFT_194553
SHIP complex
HELRODRAFT_194553
MiDAC complex
HELRODRAFT_194553
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.6)
HELRODRAFT_194553
Heterochromatin formation proteins
Other heterochromatin formation proteins
HELRODRAFT_194553
Chromatin remodeling factors
NuRD complex
HELRODRAFT_194553
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Hist_deacetyl
Motif
Other DBs
NCBI-GeneID:
20213065
NCBI-ProteinID:
XP_009030811
JGI:
Helro1_194553
UniProt:
T1FW69
LinkDB
All DBs
Position
Unknown
AA seq
628 aa
AA seq
DB search
MALMGDHSKRKICYYYDGDIGNYYYGQGHPMKPQRIRMCHNLLLNYGLYRKMEIYRPHKA
SQDEMTRFHSDDYIKFLKSIRPDNMSDFNKQMQRFNVGEDCPVFDGLYEFCQLSTGGSIA
GAVKLNKQATDIAINWSGGLHHAKKSEASGFCYVNDIVLAILELLKYHQRVLYIDIDIHH
GDGVEEAFYTTDRVMTMSFHKYGEYFPGTGDLRDIGAGKGKYYAVNFPLRDGINDESYEQ
VFQPVMSKVMEMFQPSAVVLQCGADSLSGDRLGCFNLSLKGHGKCVEFVRRFNLPTLMVG
GGGYTIRNVARCWTYETSIALQTEIANELPYNDYFEYYGPDFKLHINPSNMTNQNTTEYL
DKIKSRLFENLRMLPHAPGVQMADIVDDALKEESDDEDKQNPDERISIRASDKRIACDDE
FSDSEDEGGRTTTADGQKKNKESNRTKRMKLDDEKNSASTSTTTSVTTTVTTTASAATVV
GGAGDGTGVAVDAKDVKVDLPKDTINQISSTSSSSTSTANTPQQSATTTVATSSLTTTAP
STSNSTIDPIKAPTAVVDSSSNSQITMVTANSKSDAPLVAKQDKAPSTSTPPPSLTTNSN
ATSLTNTTITCTTSSVSSVVESSEHTAQ
NT seq
1887 nt
NT seq
+upstream
nt +downstream
nt
atggctttaatgggcgatcacagcaaaaggaagatttgctattattatgatggtgatata
gggaattattattacggacaggggcaccctatgaagccccagcgaattaggatgtgccac
aatctcctgctcaattatggactgtacagaaaaatggagatatatcgtccccataaggct
tcacaagatgagatgacccgattccacagtgacgactacataaagttcctgaagagcata
cggccagacaacatgtccgacttcaacaaacagatgcagcgattcaacgtcggtgaggat
tgccctgtgttcgacggcctttacgagttctgtcagctgtctactggagggtccattgct
ggggcagtgaagttgaacaagcaggcgacagacatcgccataaattggtcaggtggcctg
catcacgccaagaagtctgaggcatctggattctgttatgtcaatgatattgtactggcc
atactggaattgctcaaataccatcagagggtgctgtacatcgacatagacatccaccat
ggtgacggtgtggaggaggccttctacaccacggatcgtgtcatgacaatgtccttccac
aagtatggtgaatactttccaggaaccggtgatctcagggacattggagctggcaagggc
aaatactatgccgtaaactttccattgcgagatggcatcaatgatgagtcctatgaacaa
gttttccaacctgtgatgtccaaagtgatggagatgtttcagccatcggcagttgttctt
cagtgtggtgctgattccctgtcaggtgaccggctgggatgcttcaatctctcactgaag
ggacacggcaagtgtgtcgagttcgttcgtcgattcaaccttccaaccctgatggttggc
ggtgggggctacaccatcaggaacgtggccaggtgttggacctatgagacttccatcgcc
cttcagactgaaattgctaatgaattgccatacaatgattacttcgagtactatggcccc
gacttcaaactgcacatcaacccgtccaacatgaccaaccagaacaccaccgagtacctg
gacaagatcaaaagcagattgtttgaaaatctcagaatgctgccacatgctcccggggtg
cagatggctgatatagttgatgatgctttgaaggaggaaagtgatgatgaagataagcaa
aatccagatgaaagaatatcaataagagccagcgacaagcggattgcgtgcgacgacgag
ttctcagatagtgaggacgaaggtggaagaacgaccaccgcagatggacagaaaaaaaat
aaagaaagtaatagaacaaagaggatgaagttggatgatgaaaagaattcagcttctact
tccactaccaccagcgtcaccaccaccgttactactactgcttctgctgctactgtggtc
ggtggagccggggatggtacaggcgtcgctgttgatgccaaggacgtgaaagttgatctt
ccaaaggacacgatcaaccagatatcgtcaacatcgtcgtcatctacatcaacagcaaac
acaccacagcagtcggcaacaacaacggtagcaacatcgtcgttaacgacaacagctcca
tcgacttccaactccacaatagatccaataaaagcccccacagcagttgtcgactcatcc
tccaattcccaaattaccatggtaactgccaatagcaaatctgatgccccattggtagcc
aaacaagacaaagccccttccacatcaactcctcctccatctctgacaaccaatagtaat
gccaccagcctgacgaatactacaattacttgtactacttcatccgtatcgtccgttgtt
gaaagtagcgagcatactgcccagtga
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