Hymenobacter sp. BT18: HER32_02420
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Entry
HER32_02420 CDS
T06970
Symbol
mutM
Name
(GenBank) DNA-formamidopyrimidine glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
hrs
Hymenobacter sp. BT18
Pathway
hrs03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
hrs00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
HER32_02420 (mutM)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hrs03400
]
HER32_02420 (mutM)
Enzymes [BR:
hrs01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
HER32_02420 (mutM)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
HER32_02420 (mutM)
DNA repair and recombination proteins [BR:
hrs03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
HER32_02420 (mutM)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
NFACT_N
Motif
Other DBs
NCBI-ProteinID:
QIX60101
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Position
559711..560532
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AA seq
273 aa
AA seq
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MPELPEVETYRRLLDELLVQQQLVTLEVLDAHVLAVPEDELRQAVVGATVTATHRLGKNC
FLELSTGQVLALHFGMTGDVGAYRHDHDRPRFTRVAFHLADGLRVAFIDPRKFGRIRLAG
SIAEFQRAKKIGPDALAITAEEMQQGLGKKKTLIKPALLDQRLTAGLGNWIVDEVLFQAQ
IHPERLANTLTAEEFQALHAAIQLVLRTAIEHEAVYRHFPASFLIHAREWDDSATPGTEA
HRFCPRHPKVEIGKHYVGGRATYHCPSCQLLAT
NT seq
822 nt
NT seq
+upstream
nt +downstream
nt
gtgcccgaattacccgaagtagaaacttaccgtcgcttactcgacgaattactggtgcag
cagcagttagtgaccctggaggtgctggacgcccacgtgctggccgtaccggaagacgag
ttgcgccaggccgtggtaggtgctaccgtcacggctacccaccggctaggcaaaaactgc
tttctggaactctccactggtcaggtgctggccctgcactttggcatgaccggcgacgtg
ggcgcctaccgccacgaccatgaccggccccgcttcacccgcgtagcctttcacctggcc
gatggtctgcgcgtggccttcatcgacccgcgtaaatttgggcgcatccgcctggccggc
agtatagccgagtttcagcgcgccaagaagatagggccggatgcgttggctattaccgcc
gaagagatgcagcaaggcttaggcaagaagaaaaccctgatcaaacctgccctgcttgac
cagcgccttaccgccggcctgggcaactggattgtggacgaggtattgtttcaggcgcaa
atccacccggagcggctggccaatacacttaccgctgaggagtttcaggccctgcacgcg
gccatccaactagtgctgcgcacggccatcgagcatgaggcggtataccgccactttccg
gcctccttccttattcacgcccgtgagtgggacgactcggccaccccgggcacggaggcg
caccgcttttgcccccgccacccgaaagttgaaatcggcaagcattacgtgggcggacgg
gccacttaccattgcccaagctgtcagcttctggcaacctga
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