Hymenobacter sp. BT18: HER32_12720
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Entry
HER32_12720 CDS
T06970
Name
(GenBank) bifunctional UDP-N-acetylmuramoyl-tripeptide:D-alanyl-D-alanine ligase/alanine racemase
KO
K01798
Alr-MurF fusion protein [EC:
5.1.1.1
6.3.2.10
]
Organism
hrs
Hymenobacter sp. BT18
Pathway
hrs00300
Lysine biosynthesis
hrs00470
D-Amino acid metabolism
hrs00550
Peptidoglycan biosynthesis
hrs01100
Metabolic pathways
hrs01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
hrs00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
HER32_12720
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
HER32_12720
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
HER32_12720
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
HER32_12720
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
hrs01011
]
HER32_12720
Enzymes [BR:
hrs01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.1 alanine racemase
HER32_12720
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.10 UDP-N-acetylmuramoyl-tripeptide---D-alanyl-D-alanine ligase
HER32_12720
Peptidoglycan biosynthesis and degradation proteins [BR:
hrs01011
]
Precursor biosynthesis
Amino acid ligase
HER32_12720
Racemase
HER32_12720
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ala_racemase_N
Ala_racemase_C
Mur_ligase_M
Mur_ligase
Mur_ligase_C
PutA_N
Motif
Other DBs
NCBI-ProteinID:
QIX62001
LinkDB
All DBs
Position
2969707..2972205
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AA seq
832 aa
AA seq
DB search
MLLYSDLPALVDGTLLQAPTDPTLVVQYLLLDSRRVGVAAGSLFFAIRGAQHNGHRYLPE
LYQRGVRQFVVDSASEIPGGPAAFPEAGFVVVPNSLRALQELVARHRAQFRVPVLGITGS
NGKTIVKEWLAQMLSPDELLCKSPRSYNSQVGVPLSVWELNRTHTFGIFEAGISERGEMA
RLAAVIQPTLGIFTNLGTAHDAGFNSAAEKVAEKMQLFRHVDTLFYCRDHALIHAAAQQR
LDASRTFTWSRQHPQEAHVAVTVLEATADRTVVRVAQRRPLPQEHTFTVPFADEPSLENA
LHCLMVLLWRQVAPAEIQRRLDRLHPVAMRLEMKQALNDCYILDDTYNNDLAGLSLALDA
LVRQPRRGRRTLILSDVLESGLAGPELYARVAQQLATHGVERLVGIGPDISASAVAFPGV
SAEFYPDTAAFLADFRPDQFRHETILVKGARRFGFERIVAVFQQKIHGTVLEVNLDALVH
NLNFYRSRLQPGTKLMVMVKAFAYGSGSYEVANLLQFHRADYLAVAYADEGVDLRQQGIS
LPLMVMNPSPDSFQKLRQYHLEPEIYSFEALADYLRAAQDQPLPPMHLKLDTGMRRLGFA
EEDLEELCALLQTHRAQLRVASLLTHLAGADEAQHNDFSRQQLAAFSRMAPRLEAALGYS
VLKHALNSAGIIRFPDSHFDMVRLGIGLYGVEATGQQQDALCPVSTLQTTVSQVKTLAPG
QTVGYSRRGQATDYERRIATLAIGYADGYDRRFGNGGGEVVIRGQRAPIVGNVCMDMCMA
DVTGIAGVQAGDVAEVFGPHIPLTELASRIGTIPYELLTNVSDRVKRIFVAE
NT seq
2499 nt
NT seq
+upstream
nt +downstream
nt
atgctgctatactctgatttgccggccttggtagatggcacgctgctgcaggcccccacc
gatccgaccctggtggttcagtacctgctgctcgacagccgccgggtgggcgtagcggct
ggctcgttgttttttgccatccggggtgcccagcacaatgggcaccgctacctgcccgag
ctctaccagcgcggtgtgcggcagtttgtggtcgatagcgcaagtgaaattccgggcggt
ccggctgcttttcccgaagcgggctttgtggtggtgcccaacagcctgcgggctttgcag
gagctggtagcccgccaccgggcgcagtttcgggtgccggtgctgggcatcaccgggtcc
aatggcaaaaccatcgtaaaggagtggctggcccagatgctgagtcccgatgagctgctc
tgcaaaagtccgcgctcctacaactcgcaggtgggcgtgcccctgagtgtgtgggagctc
aaccgcacgcacacctttggcatcttcgaagcgggcatttcggagcgcggcgaaatggcc
cggctggcggccgtcatccagcccacgctgggcattttcaccaacctgggtacggcccat
gatgctggtttcaactcggcggccgagaaagtggcggagaaaatgcagctgttccgccac
gtcgatacgctgttttactgccgcgaccacgccctcattcacgccgctgcccagcagcgg
ttggatgccagccgcaccttcacgtggagccgccagcacccgcaggaggcgcacgtagcc
gttacggtgctcgaagccactgccgaccgcaccgtggtgcgcgtggcccagcgccgcccg
ctgccgcaggagcacaccttcaccgtgcccttcgccgatgagccctccctggaaaatgct
ctgcactgcctgatggtgctgctctggcgccaggtggctcccgccgaaatccagcgccgc
ctcgaccggctgcatcccgtggctatgcgcctggaaatgaagcaggccctgaacgactgc
tacatcctggacgatacctacaacaacgacctggcgggcctgagtctggcactggatgcg
ctggtgcgccagccccgccgcggccgccgcaccctcattctgtccgacgtgctggagtcg
gggctggcggggccggagctttacgcccgggtggcgcagcagctggctacgcacggcgtg
gagcgtttggtgggtatcgggccggatatcagcgccagcgcggtggccttccctggtgtg
tcggcggaattttaccccgatacggcggcatttctggctgatttccggcccgaccagttt
cggcacgaaaccattctggtgaagggcgcgcggcggtttgggtttgagcgaatcgtggcg
gtatttcagcagaaaatccacgggacggtgctcgaagtcaacctggatgccctggtgcat
aacctgaatttctaccgcagccgcctgcagccgggcaccaagctgatggtgatggtgaag
gcgtttgcctacggcagcggctcctatgaagtggccaacctgctgcagtttcaccgtgcc
gattacctagccgtggcctatgccgatgaaggcgtggacttacgccagcaaggcatcagc
ctgccgctgatggtgatgaacccctcgccggactctttccagaagctgcgccagtatcat
ctggagcccgaaatctactcttttgaagcgctggccgattacttgcgcgccgctcaggat
cagcccttgccccccatgcacctgaagctggataccggcatgcggcggctgggctttgcc
gaggaagacctggaggagctgtgcgcgctattgcaaacgcaccgcgcccagctgcgcgtg
gctagcctacttacgcacctggccggcgccgacgaagctcagcataatgatttttcccgt
cagcagttggccgcgttcagccggatggctccgcggctcgaagccgcgcttggctattcc
gtactgaagcacgcccttaactcagcgggcatcattcggttccccgacagccattttgat
atggtgcggctaggcatcgggctgtatggagtagaagcgaccggccagcagcaggatgcc
ctgtgccccgtcagtacgctgcaaaccacggtttcgcaggtgaagacgctagccccgggc
cagacggtgggctacagccgccgcggccaggctacggactacgagcggcgcattgccacc
ctggctatcggctacgccgatgggtacgaccggcgcttcggcaacggcgggggcgaagtg
gtcattcgcgggcagcgggcccccatcgtgggcaatgtgtgcatggatatgtgcatggcc
gacgtgacgggcattgccggcgtgcaggccggcgacgtggccgaagtgtttggcccccac
atccccctcaccgagctggccagtcgcatcggcaccattccctatgagctgctgaccaac
gtgagtgaccgggtaaagcgcatcttcgtggcggagtaa
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