Hymenobacter sp. BT18: HER32_16580
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Entry
HER32_16580 CDS
T06970
Symbol
sbcD
Name
(GenBank) exonuclease subunit SbcD
KO
K03547
DNA repair protein SbcD/Mre11
Organism
hrs
Hymenobacter sp. BT18
Brite
KEGG Orthology (KO) [BR:
hrs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hrs03400
]
HER32_16580 (sbcD)
DNA repair and recombination proteins [BR:
hrs03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
HER32_16580 (sbcD)
Archaeal homologous recombinant proteins
HER32_16580 (sbcD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Metallophos
Metallophos_2
SbcD_C
Motif
Other DBs
NCBI-ProteinID:
QIX62699
LinkDB
All DBs
Position
complement(3858434..3859666)
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AA seq
410 aa
AA seq
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MRVLHTADWHLGQRFISGHERTEEHRHFLDWLVETVRAQRVDVLVVAGDVFDTSSPSNQA
LELYYSFLLNMRGTGCRDIVVVGGNHDSPATLNAPARLLRHLRVHVVGCVPDCFEDQVLV
LDDAAGKPGLVVCAVPFLRDRDVRLSVPGETAEEREARIKQGIADHYARLAEVEQVWQLK
EMGLPVLATGHLYAAGAAPSDSERTIHVGNLGQVTAEHFPRIFDYVALGHIHRPQRVGSN
EHIRYSGSPIPLSFSEIDHPKEVLLLEFREGKLAELQSLPVPGARRLVRFHGSLEEVTLG
LTTYDNTGFLLPAWADVQIHSELTQLEVADALLKVIQALDRHQLEVLARRHFRLVKLRAL
GQEEDETQEPLTRSLHDFTEREVFEQRLEAEPEDSRAELLRTFDELLEQM
NT seq
1233 nt
NT seq
+upstream
nt +downstream
nt
atgcgcgtactacacaccgccgactggcacctgggtcagcgttttatcagcggccacgaa
cgaaccgaggagcaccgccatttcctggactggctggtggaaacggtgcgcgcgcaacgg
gtggacgtgctagtggtagccggtgacgtgttcgataccagctcgccctccaaccaagcc
ctggagctgtactattccttcctgctgaacatgcgcggcacgggctgccgcgatattgtg
gtggtgggcggcaaccacgattcccccgccacgctcaatgccccggcccggctgctgcgc
cacctgcgcgtgcacgtggtgggctgcgtgcccgactgctttgaggatcaggtgctggtg
ctggacgatgccgccggcaaacccggcctggtggtatgcgccgtgccctttctgcgcgac
cgggacgtgcgcctttccgtgccgggcgaaacggcggaggagcgcgaagcccgcatcaag
cagggcattgctgaccactacgcccgcttggccgaggtagagcaagtgtggcagctcaag
gaaatgggcctgcccgtgctggccaccgggcacctgtacgccgccggtgctgccccctcc
gactcggaacgcaccatccacgtgggtaacctggggcaggtcacggccgagcacttcccc
cgcatcttcgactacgtagccctagggcacattcaccgcccccagcgcgtgggcagcaac
gagcatatccggtattccggctcgcctatcccgctctcattttccgaaatcgaccacccg
aaagaggtgctgctgctggagttccgggagggtaagctggccgagctgcaaagcctgccg
gtaccaggtgcccgccgcctggtgcggtttcatggcagcctggaggaagtcacgctggga
ctcaccacctacgacaacacggggtttctgctgccggcctgggccgatgtgcagattcac
tcggagctgacgcagctggaagtagccgatgccctgctgaaggttattcaggccctggac
cgccatcagctggaagtgctggcccgccgccacttccgcttagtgaaactacgcgccctt
ggccaggaggaggacgaaacgcaagagcccctcacccggagcctgcacgatttcacggag
cgcgaagtatttgagcagcgcctcgaagccgaaccggaggacagccgcgccgagttgctg
cgcacgttcgacgagctgctggagcagatgtaa
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