Hirundo rustica (Barn swallow): 120748913
Help
Entry
120748913 CDS
T09369
Symbol
CFAP47
Name
(RefSeq) cilia- and flagella-associated protein 47
KO
K25552
cilia- and flagella-associated protein 47
Organism
hrt
Hirundo rustica (Barn swallow)
Brite
KEGG Orthology (KO) [BR:
hrt00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
hrt03037
]
120748913 (CFAP47)
Cilium and associated proteins [BR:
hrt03037
]
Motile cilia and associated proteins
Sperm associated proteins
120748913 (CFAP47)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ASH
PapD-like
DUF1573
TMEM131_like_N
CH
CAMSAP_CH
Motif
Other DBs
NCBI-GeneID:
120748913
NCBI-ProteinID:
XP_039911814
LinkDB
All DBs
Position
2:complement(110131760..110399353)
Genome browser
AA seq
3179 aa
AA seq
DB search
MAEPWRDVCGVRIAPPELRFRDAIPGSCYRAAFTVQNLRAGTCHLRLLPPQEPQFKLIVE
NPEKLLASGLQVKAVVEYTPKCAEDFQDKLTLLVDDDVVHIPLFGLIPYCDLEIESEVNF
GEMIANNKLVTKQISIVNRGTTSGVFRVSYDGVVLLNIKPDRGVVKPKSVRKIRVDICTD
VPGVIKEMMKVELESRGCAEVWIKGVVVEQVLKVLGASCGKVLKCINFGPLYFGTSKTEK
IHLYNDSPESVDWVAVLEDSAIGGEMGIDLQGSTDAVLHDLSLEKKDVDVSTLILCVPNQ
GTLLPYEKSLITICFSPEKCERDFEVNDTSLVQDYVLFLRFEAVGERSGCLQDLSGGATA
TTRSCSPHVDLALKGSGFPVILTFKPGTVINFKGCYFGEQTQVVCTMKNESEFLPVTFSF
RKTAHFNISPERGTLKIKSEKEMMFSFSPRQIGTFEMKQIIDIIGTGVDKNNVDVLKTKS
FHQIYLTLLGVCKSKPTSVVFTINPGLTPLISNATGQFVVRGKGQLSDTAPVAILKSTQT
QIHTHRKNRNCKDDALIAFPNDRAASLRPSEWNKKYRTIFTKTERYNYVDPEFAYTDFER
LLRKANTKLYIDFISSLRQRRLEKQAARDFFIYNNPVNIGIKPAESLKSPKISISDLPKE
KPEPKMLPLDENCMLTSRKLAAMVSKSTNKGVWSWLSPMPSSPREKEDCKLTLTNKQLHQ
IFIGPSTIDFGDVCVHSTTTKELQIINNLSIHIWIQIEVKVAELQETSPLSQVVPPLTKT
HIPVVLETTTVGMFKSSFRYKINNQHIGHVLVVARAMPFELQLSTRELILSPVPGCLAGT
EFRRAVRVCNPRNYPVGFTWRPVTGEGKSAFTIKPTRGFVEPYSDVECEVVWHPGFNTPE
TGQFILCVRQGNSINLKCLAKFGATRVQFMAQNISFTHSPIGFTTYRTASILNTGYNHAY
FQVLDTNPLPGMKITPSEGVIPVGGVVDLKISFSPKAHMSFQKKVKVAVRNAAELTLQIG
GFSEITEIGIDVKLFEYGEIFANATKSIPFLLQNKGQSCTRVEFDFSNYKDFKLNAEDSS
AIDCSRSNPCLYSVDLKEGSSLQCFLVLTAKKMAVYDFLLPVSTPRASSPPPAPPAPLKC
GAPAPQPPPEAPPLPSCRVKASVIKPLLEFSSMEFKFEQHSSNMHPSTADKSMNSQDLIL
KCLSRQSVTWKLNFDDVDKNIEDGIFRFSLQRGCLYKKEEVSITVSFYPPSPGTFTSEIS
LYLNCHPLQYILKLSGTLRSPKIGFHPPFLMLMPVPLGVETEDVITIIPQDFIRQSRITV
KLPVAELADGTTTCPFTVQFPEGQDIVLSSDGTANELTCRISFRSSKPMSFLGEMLFIDQ
EENRFSFRVSGTADNCLLTLYPYLALHCSDRKIIWRSNNKDFSTGEIVLQPCFTPPSSSQ
SYSTSPLGAAGGSTCEDSASESTTNESESDAYESEENEGTNEESKTDSQSDGKGNKRELS
FYPDEDKEEYTFFQKTLAAVKSWFTLFGWSKGQNPISVPHSLRRDVCIVQLTVAQEKSFK
QKIDKDKGFYAMLLHLNGEPIPGIAASQSLPPDPVERMFQLHWQHSELLSFLRGQGAYLS
HVMPEFLLAPEDYEIWTEVNTGLRCFTPEVKRGSMRSSGKLSGRSVFILGHRTFETMSKR
AWMDVLLQIYKVFVLPCISPRIVPDPSSLESLKNMPGIKSEPLCSNIYSRYERAVIIWLN
KHYETHRKIVWKDSQRGGIPPMRWIVNFDRDLLDGLVLAAQVAAYCPYLIPTHFIKMYTN
PRTPEQFLHNSLILVKALHSVGLDIDIKATDICDPHPVMMLILCVHLYYTLPHYLPRSTI
EFTGALHATIVKQVRLKNPSNKTLAYNALLVGRDADDFSLSKGNTATIPPLRQGFVTVEF
TIRFLRPAEAVLILISDKVDGADGATMTFSLKSEVKKIEPLSMIKCRSPCYELKKFNVNV
TNPFRTDGIFRVILLESTQYLVNAEKVCQARQVKQEQTFSSENNVLNSKDGALREDLNKE
TCSDQSGLLPEFFSPMENLFLKGKGSATLDIHFLPFQQEKRYCSVILANEKIGDFVCLIE
GTGDLPLPSELPALDSPNVLHATNTSEDASTVQPVLYLKCGLGQTLKENLKIPLINESKE
RALALAAQQQMSAFEYERRLMTGTLQSSSVRVATALLGLSRVERRALLKPHRHPSEQKYV
DYSVEVSMKHVFEVPKKFSIPVLASARVNLDTSSDQCPTSQKTGGIDTVEFPIKFTPEHP
GCYHCQILLKSSCDIRVYEIECVVNADQADAQLEFVTPAYQAVTQEIPISNITSEDWRFE
VLLEGHCFHGPPVLNVPVGETVQYPLTFKPVAESVIMGKLVLRNVTAGTQNVFSLKGIGK
KPLPQDCIVVECQVGKVAHKILWVHNYTKKMLKYKVYSNLSMLSGAPDVVVNPEDTAAYT
LTIAPCRRGVFQGVISFVAQDEDQEQPQTSSSPPMKGRKRALQKRPARTPPPLKAANVGG
SSTNCKVWFSLKIYSTPAAAERTIEVDCKALDTVGINIPITNPTNKVLKMNVLLDHPSLF
GEKSFVVKPKQTFSYHVQFSAAALGAFAGSVMFRSDVVGEFWYELKFNVEKPSPTGLPDI
RCELGKWAHTNIPLANPTHETLVLQMVNSDPSHFTVETDPNQPLTLPPHSTTQLPVRFCP
SALGRRNHKATITFKCPKFGEQIFHLTGSGAPPEQMEATTISACIGEYSSVVISFENPTA
ENVVVDIKLADHELLNQCLSASVLSQATCKESVFQLLVKQPQGIRLAPKEKLEVPVLFLP
SEMKIYKAVVVIHVMRENGENWPYKVAAGSNTDLKRNVTAAQNGETQGIVWIYPINGTPE
APQQKSVVICCQARQRLEQRVELLLIGVIMPGASALPHAGNSAMVNTDESSNTPEVTDGS
SATLEFLYELQYQSDEIRSQLESLIGLQLVEKEWDTESRIVTLIFNVVFAPSKPMRNEAT
IVIQCTAGGLWKFPLVLTATEPEVDDVINIEAVGLNKESIVGFKLTSQTRYPERFTAHFL
AGSDPDFLVMPQAGELLPAGTVGTDITVGYKPRMYGRRQTATLVIETQSMQWTYIINGLP
PQTVPPAVAARVVCTSSYMGSSMVRQRNFIRENLKLVTTGPSSPIKGAPLVLRKKQRNV
NT seq
9540 nt
NT seq
+upstream
nt +downstream
nt
atggcggagccgtggcgggacgtgtgcggggtgcgcatcgccccgcccgagctgcgcttc
agggacgcgatcccggggagctgctaccgcgccgcgttcaccgtgcagaacctgcgggcg
ggcacctgccacctgcggctgctgccgccacaagagccccagtttaaattgattgtggaa
aatccagaaaaactccttgcatctggacttcaagttaaagctgttgtggaatatactccc
aagtgtgcagaagattttcaagataaactaactcttttagtagatgatgacgtggttcat
atccccctctttggattaattccatactgtgatctggaaatagagtcagaggtgaatttt
ggtgaaatgattgcaaacaataaactagttactaaacagattagtattgttaaccgtgga
acaacttcaggtgtatttagagtatcatatgatggggttgtcttgcttaacataaaacct
gacagaggagtggtaaagccaaaatctgtaaggaaaattcgagttgatatctgcacagat
gtacctggagtcatcaaagaaatgatgaaagtggagttggaaagtcgtggctgtgctgaa
gtatggatcaaaggtgttgtggttgaacaagttcttaaagttcttggagcgtcttgtgga
aaagtactgaaatgcattaactttggacctctttactttgggacttcaaagacagaaaaa
atacatttatacaatgatagccctgagagtgtggattgggtagcagtactggaagacagt
gccattgggggagagatggggatagatcttcaggggagtacagatgctgttttgcatgac
ttaagcctggaaaaaaaagatgtagatgtttccaccttgatcttgtgcgttcccaatcaa
ggaactttgctgccttatgagaaatctttgattacaatctgctttagtccagaaaaatgt
gaaagagactttgaagtgaatgacacatcactggttcaagattatgtcctgtttctgaga
tttgaagctgttggggagagaagtggctgtctgcaggacctcagtggtggtgccacagca
accacaaggagttgttctcctcacgtggacttagccttgaaaggttctggatttcctgtg
atactaacttttaagccaggaacagtaattaattttaagggctgttattttggtgaacaa
acacaagttgtgtgcacgatgaaaaatgaatccgagttccttccagtaacgttcagcttc
cgaaagaccgcgcacttcaatatttctcctgaaagaggaacgcttaaaataaaatctgaa
aaggaaatgatgttttcattttctccacgtcaaataggaacatttgagatgaagcaaatt
attgatatcattggtacaggagtagataaaaataatgtagatgttttgaagacaaaatcc
tttcatcaaatatatttgaccttacttggtgtgtgcaaatctaaaccaacaagcgttgta
ttcacaattaatcctggtctaacacccttgatttccaatgcaactggacagttcgtagtt
cgtggcaaaggacagctcagtgatacagcacctgtggcaatccttaaatcaacccaaaca
caaattcatactcaccggaaaaacaggaattgtaaggatgacgcacttatagcttttcct
aatgatcgtgcagccagccttaggcctagtgaatggaataaaaagtacaggactattttc
acaaagactgagagatataattacgtagatccagaatttgcttatactgactttgaacga
ctgttgagaaaagcaaatacgaaactctatatagacttcatttccagtttaagacagcgt
cgtttagagaaacaggctgctagggatttttttatttataacaatcctgtgaacataggt
attaaaccagctgaaagtcttaaatcaccaaagatctcaatctcagatttgcctaaggag
aagccagagcccaaaatgcttcctttagatgaaaattgcatgttaacaagcagaaaattg
gcagcaatggtctctaaatctacaaacaaaggagtttggagctggcttagtcctatgcca
tcttctcctcgggagaaggaagattgtaagctaactttaacaaacaaacagcttcaccaa
atattcattggtccttctactatagattttggtgatgtttgtgtgcattctacaacaacc
aaagaactacagatcatcaataacttgtcaattcatatttggattcaaattgaggttaaa
gttgcagaattgcaggagacatctccattgtctcaggtggtgcctcctcttacaaaaacg
catattccagttgtgttggagacaaccactgttgggatgtttaaaagttctttccgttac
aaaataaacaaccaacacattggacatgtgctggtagttgcacgtgcaatgccttttgaa
ctccagctgtctacaagggagctgattttgagtcctgttcctggctgcctagcagggaca
gagtttagaagagctgtcagggtatgcaatcccagaaactatcctgttggctttacctgg
agacctgtaactggagaaggaaaatctgcatttactataaagccaacaagagggttcgtg
gagccctatagtgatgtggagtgtgaagttgtttggcatccagggttcaacactccagaa
acaggacagttcatcttgtgtgtgcgccaaggaaattcaattaacttgaaatgtttggca
aagtttggtgctacaagagttcagtttatggctcaaaatatatccttcactcatagtcca
attggtttcactacttataggacagccagtattctaaacacaggatataaccatgcatac
ttccaagttcttgacacaaacccactgcctggaatgaaaatcaccccctctgaaggagtg
atacccgtgggaggtgttgttgatctcaaaatctctttctctccaaaggcacacatgagt
tttcaaaaaaaagtgaaggtagcagtgaggaatgcagcagagctcactcttcagattggt
ggattttcagagatcactgaaataggcattgatgtgaaactatttgaatatggtgaaatt
tttgctaatgctacaaaatcaattccatttttgcttcagaacaaaggacaatcatgtact
agagtggaatttgatttttccaattataaggattttaaattgaatgctgaagacagctca
gcgattgactgttctcgttcaaacccttgtttgtattcagttgacttaaaggaagggtca
tctttgcaatgcttcttggtcttaacagcaaaaaagatggcagtatatgacttccttctc
ccagtttctactcctcgggccagttccccacctccagctcctcctgcgcctctgaagtgc
ggtgcccccgcgccccagccacccccggaggctcctcctcttccatcgtgtagagtcaaa
gcttctgtaattaagccactattggagttctcctcaatggaatttaaatttgaacaacat
tcgagtaacatgcatcctagtactgctgacaagagtatgaactctcaggaccttatcctg
aagtgtctctcaagacagagtgtgacatggaaattgaattttgatgatgtagacaaaaat
atagaagatggtatttttaggtttagtctgcagcgcggatgtctttataaaaaagaagaa
gtcagtattactgtgtcgttttaccctccttctcctgggacatttacatctgaaatatcc
ttgtatctaaattgtcatccattacaatatatactaaagttatcgggcacgctgaggtca
ccaaaaataggttttcatcctccctttttaatgctgatgccagttcctctgggtgtggaa
actgaagacgtcatcaccatcattccacaggattttataaggcaatcacgaattacagtt
aaacttcccgtggctgaacttgcagatggtaccacgacttgcccttttactgtgcagttc
ccagagggacaagatattgttctttcatcagatggcacagctaatgaactgacttgccgt
atcagtttcagatcatctaagccaatgtcatttttgggggaaatgctcttcatcgatcaa
gaagaaaacaggttctcatttcgggtttctggaacagcagacaattgtcttcttaccttg
tacccatacttggcattgcactgctctgaccgaaaaattatctggagaagcaacaataaa
gacttcagcactggagaaattgttctgcagccgtgttttacgccaccatcatcttcacag
agttattccacaagtcctttaggtgcagctggtggttcaacctgtgaagattctgcatca
gagagcaccactaatgaaagtgagagtgacgcatatgaaagtgaagagaatgaaggaaca
aatgaagagagtaaaactgacagtcaaagcgatgggaaaggaaataaacgtgaattatca
ttttatcctgatgaagataaagaggaatacaccttctttcaaaagaccctagctgctgtg
aagagttggttcacactctttggctggtctaagggacaaaatcccatttcagtacctcac
tccctgagacgtgatgtgtgcatagtccagctaaccgttgcacaagaaaagagttttaaa
caaaagattgacaaggataagggtttttatgcgatgttattgcatctgaatggagagcca
ataccaggcattgcagcgagccagtcattgccccctgatccagtagaaagaatgttccag
ctccactggcagcattctgaattgctttccttccttagaggccaaggagcatatctttct
catgttatgccagaatttctgcttgcacctgaagattatgagatatggacggaagtgaat
actggactgaggtgtttcacacctgaagtgaagagaggcagcatgagaagctcaggcaaa
ttaagtggcaggtctgttttcattctggggcacagaacgtttgagaccatgagcaaacga
gcttggatggatgtgctgctgcagatatacaaggtgtttgttcttccatgcatttctccc
cgtattgttcctgacccatcaagcttggaaagcttgaagaacatgccaggaataaaatca
gaacctttatgcagtaatatatattctcgatatgaacgagccgtcatcatctggttgaat
aaacattatgagacacatcgaaaaattgtttggaaagatagtcaaagaggtggaatacca
cccatgagatggatagtgaattttgaccgggatcttcttgatggtctggtattggcagcg
caggtagcagcttattgtccatatttgattcccacccacttcataaagatgtatactaat
ccaagaactcctgagcagtttctgcacaactccttgatacttgtgaaggctctgcattca
gtcggtctggatatagacataaaggccacggatatctgtgatccacaccctgtcatgatg
cttattttgtgtgtccacctgtattacactctccctcattacttacccaggagcactata
gaatttacaggtgcactccatgcaactattgtgaagcaggtgcgcctgaaaaacccaagc
aataagactttggcatacaacgctcttcttgtgggaagagatgctgatgatttctcttta
tctaaaggaaacactgctaccattcccccactgagacaaggctttgtgactgtggaattc
acaattcgtttcctgcgccctgctgaagcagtattgatactgatctcagataaagttgat
ggagcagatggtgccacaatgacattctctctgaaatctgaagttaagaaaatagagcct
cttagtatgataaaatgcagatccccatgttatgagctgaagaaatttaacgtgaatgtt
actaatcctttcagaactgatggcatattcagggtaattttgctggaatccacacaatat
ttagtgaatgcagagaaagtgtgtcaagccaggcaagtaaagcaagaacaaacgtttagt
tctgaaaataatgtactaaattcaaaagatggtgcactgcgtgaggatttaaacaaagag
acttgctctgatcaatctggcctactgcctgagttcttcagtccaatggaaaacctgttc
ttgaaaggaaaaggttctgcaaccttagatattcacttccttccctttcagcaggaaaaa
cgttattgcagtgtcattctggctaatgaaaagattggagactttgtctgcctcatcgag
ggaacaggtgatttacctttgccttcagaattgcctgccttggatagtccaaatgttttg
catgctaccaatacctcagaagatgcaagcacagtacagccagttttatatttgaaatgt
ggccttggtcagactctgaaggaaaatctgaagattccgttgatcaatgaatcaaaagag
agagccctggctctcgctgcacagcagcagatgtcagcttttgagtatgaaaggagactg
atgaccgggactctgcagagcagcagcgttcgagttgcaactgcattgttggggctgtcc
agagtagagagacgtgcacttctgaaacctcataggcacccctcagagcagaagtacgtg
gattacagcgtagaagtgagcatgaaacacgtctttgaagttcctaaaaagttctctatc
ccagtgttagcttcagccagagttaatttggacacttcatcagaccaatgccctacatct
cagaaaacaggtggaattgatacagttgagtttcctataaaattcactcctgagcatcct
ggttgctaccactgtcagattcttctgaagtcatcctgtgatattcgtgtgtatgagatt
gaatgtgtggtgaatgcagaccaggctgatgcacagctcgaatttgtaactccagcttac
caggcagtgactcaggagattccaattagtaacataaccagtgaggactggaggtttgaa
gtacttttggaaggacactgttttcatggacctccagtattaaatgtgcctgtaggtgaa
acagttcagtatcctctcacattcaagccagttgctgagagtgtaataatgggaaagctt
gttctgagaaatgttacagctggaactcagaacgtctttagtcttaagggaatagggaag
aaacctctgccccaggattgcattgtggtagagtgccaagtgggaaaggtggctcataaa
atcttatgggtgcacaattacaccaagaagatgttaaaatacaaggtgtattccaatctc
tcaatgctgagtggtgcccctgatgtggttgtcaacccagaggacacagctgcttacact
ttgactatagctccctgcagacgaggagtctttcaaggtgtaatttcatttgttgctcaa
gatgaagaccaagagcagcctcaaaccagtagctcaccaccgatgaaaggtcgtaaacga
gcccttcagaaacggccagcaaggactccaccacctcttaaagcagctaatgttggagga
agttctacaaattgcaaagtgtggttctccttgaagatttacagcacacctgcagcagca
gaaaggacaatagaagtggactgtaaagctctggatactgttggaattaatattcccatc
actaatcctaccaataaagttctcaagatgaatgtgctgctggaccatccatcccttttt
ggcgaaaagtctttcgttgtcaagcccaaacaaacattttcctatcacgtacagttttcc
gcagctgctcttggcgcttttgctggaagtgtcatgttccggtcagatgtggttggggaa
ttttggtatgagctgaagtttaatgtagagaagccatcaccaactgggctacctgatata
agatgtgagcttggaaaatgggctcatacaaacatacctcttgctaatcctactcatgaa
actctggtgctacaaatggttaacagcgatcccagccattttacagttgagactgaccca
aaccaacctctgactcttcctcctcattccaccactcagctgcccgtgagattctgtccc
tctgcccttggaagacgcaatcacaaggcaacgataaccttcaaatgcccaaagtttgga
gaacaaatatttcatctgacgggatctggagctcctcctgagcagatggaagcaaccacc
ataagtgcctgcattggcgagtactcctctgttgtcatatcctttgaaaatccaactgct
gaaaacgtggtggtagatatcaagctggcagatcatgagctgttgaatcagtgtctgagc
gcatctgtcctgtcccaggccacctgtaaggaatctgtttttcagcttctggttaaacag
ccacaaggaatccgattagctccaaaagaaaaactggaagtccctgtattattcttgcca
tctgaaatgaaaatttataaagcagtggtggtaattcatgtaatgagggaaaatggtgaa
aactggccttataaggttgctgctggatcaaatacagacttaaaaagaaatgttactgca
gcacagaacggggaaactcagggaattgtctggatctatccgattaatggaacccctgaa
gcaccacagcagaaatcagttgtgatatgctgtcaagccaggcagagactggaacagaga
gtagagctgctgctgattggtgtaataatgcctggtgccagtgctctgcctcatgcaggg
aattctgccatggtcaatacagatgagtcgtccaacaccccagaagtcactgatggttcc
tctgcaacactggagtttctgtatgaattgcaatatcaatcagatgaaattagatctcag
cttgagtctttgattggtttgcagctggttgaaaaagaatgggatacagaatccagaatt
gtaacactgatctttaatgtagtgtttgcacctagcaaaccaatgaggaatgaggcaacc
attgtaattcagtgtactgctggaggcctttggaagtttccattggtgctcactgccacg
gagccagaagtggatgatgtgatcaacattgaagcagttggcctgaataaggaatccata
gttggctttaagctcacaagccagacaaggtacccagagcgattcactgcacacttcctg
gcgggcagcgatcccgatttccttgtcatgccacaagctggagaacttctcccagcaggc
actgtgggaaccgatataacagtgggatacaagccaaggatgtatggcaggaggcagaca
gcaacgctggtcatcgagacacaatcgatgcaatggacatacataatcaatggacttcct
ccacagactgtaccacctgcagtggcagcaagagtggtttgcaccagcagctacatggga
tcatccatggtccgacaacgcaactttatacgtgaaaatctgaaacttgtaaccactgga
ccatcctcaccaatcaaaggagcacctttggtccttaggaaaaaacagagaaatgtataa
DBGET
integrated database retrieval system
