Hirundo rustica (Barn swallow): 120750679
Help
Entry
120750679 CDS
T09369
Symbol
IMPG1
Name
(RefSeq) interphotoreceptor matrix proteoglycan 1
KO
K19016
interphotoreceptor matrix proteoglycan 1
Organism
hrt
Hirundo rustica (Barn swallow)
Brite
KEGG Orthology (KO) [BR:
hrt00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
hrt00536
]
120750679 (IMPG1)
Glycosaminoglycan binding proteins [BR:
hrt00536
]
Hyaluronan
Extracellular matrix or blood plasma proteins
120750679 (IMPG1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SEA
EGF
Motif
Other DBs
NCBI-GeneID:
120750679
NCBI-ProteinID:
XP_039915536
LinkDB
All DBs
Position
3:84370031..84423974
Genome browser
AA seq
1037 aa
AA seq
DB search
MHLKTGLIFLIICLALQVQGSREIPNKINRAETKHLTVTSGSDKTERTTKRSRISTIRRI
FDMAKHRTKRSSFFSTGVKVCPQESVKQILASHQAYYRLRVCQEAVWEAFRIFLDRIPDT
SEYQNWVTACQRETFCIFDIGKNFSNSQEHLEIIQRRVKHRTFQERKDEISAEKIGGKKV
EDIPSISTGSPGTPLSPYAPNGTLLNEIFNDTKTPAKELGTNAVPELPVEQMVEFSVTLT
DQEYTAELSDPNSPEYQQLAAKFQLQMKKIFEKLPGFKEIRVLGFKQKKEKDGSSSTVAR
YVVNFERDASETKGIADDISTIGSNKVESEKIPISPVEEREISVTKLTVTDLQQLVATAL
HEDQSLPVDLGTLQFTDETIIPPSDLDNDIQGVVTIPLAGPDLRDSVREELPLGHPSPAT
VDQRGDVFVDKFATETPALSEEISIPEEFNNFITSEPDFPTKPSREPFQDRYPYTQVITT
DHPSSTVPFSALGSTSSPPKPEDSYLPPPADDSAGKDSLTDGYGSPGELVTAGSFTTPDL
LAAAEVESEAEGKQELADTAEPPFKEVDQDSLSGQAVKIMEEPESSGDDIFVTTSTYESL
PFFTGPSDVSTVQPGAVITDVLPSIAPLPAATSPSYSPSEIIEQSLELPDSSAPAPEGVP
EDGTGMGVQDIAAELDQIGAMSTAALDEGEQGSGDISELTTEPAETTPAPVLKYVTTSSM
TTAAKGKELVVFFSLRVTNMHFSDDLFNRSSTEYKALEQQFMQLLLPYLQSNLTGFKHLE
ILNFRNGSVIVNSKMKFAKTVPYNITEAVHCVLEDFCDAAAQHLNLEIDSYSLDIEPADQ
ADPCKFMACDKFSECVMNEWTKEADCLCKPGYASQDGLPCRSLCELEPHLCVNGGKCDLV
PGRGAVCRCPVRRHQLYQGQRCAKFGPEPTQPFIFKPLILGLGSLGFLFIILIIQIRRKC
KRNSNLQSPTLSSSNPENAVRINPAFEHDEPLSSFCHTACSVSACLSTSEILDHEALHEL
ENTIQPGGHQMSLQNQE
NT seq
3114 nt
NT seq
+upstream
nt +downstream
nt
atgcatttgaaaactggattaatatttttgatcatttgtcttgctctccaagttcaggga
agcagagaaattcctaataaaataaaccgtgctgaaaccaaacatctcacagtcacctca
ggatcagacaaaacagaaagaacaacaaagcggtccaggatatcaaccataaggaggata
tttgacatggcaaaacaccgaacaaagaggtcatcctttttctcaactggtgtgaaagtt
tgcccacaagaatcagtgaagcaaattttagccagtcaccaagcttactatagattaaga
gtctgccaggaagctgtgtgggaagccttccgtatttttctggatcggattcctgatacc
tctgaatatcagaactgggttactgcctgccagagggaaaccttttgcatattcgacatt
ggcaaaaacttcagcaattcccaagagcacctggaaataattcaacggcgagtgaaacat
agaaccttccaggaaaggaaagatgaaatatcagcagagaaaataggaggcaaaaaggtg
gaagacattccctccatttctacaggctctcctggcacaccactctctccatacgcaccc
aatggcacattgctcaacgaaattttcaatgacacaaagactcctgcaaaggagctggga
acaaatgcagtccctgagttgcctgtggagcaaatggtggaattcagtgtcactctcact
gatcaggagtacacagctgaacttagtgaccccaactccccggagtaccaacaactagct
gccaaatttcagctacagatgaaaaaaatatttgagaaacttccaggattcaaagaaatc
cgcgtgttaggattcaaacagaagaaggagaaagatggatcaagcagcacagtagcacga
tacgtggtgaactttgagagagatgcctcagaaaccaaaggcatagcagatgacatctca
actattggctctaataaggttgaaagcgaaaaaataccaatttctccagttgaagagagg
gaaatatcagtgactaaactgacagtaacagaccttcagcagctggttgccactgcactc
catgaagaccagtccctgccagtggacctcggaacacttcagtttactgatgaaactatt
ataccacctagtgatttagacaatgatatccaaggcgtggtcactattcctctagcaggc
cctgatttgagggactctgtcagggaggaactcccactaggtcatcccagtccagcaaca
gtggatcaaagaggagatgtatttgttgataaatttgcaactgaaacccctgccctaagt
gaagagatcagcatccctgaagaatttaataattttattacatctgaacctgattttcct
accaaaccctccagagaaccatttcaggacagatacccatacacccaagttattactact
gaccacccaagttccacagtgcctttcagtgctctgggtagcaccagcagtcctccaaaa
ccagaggattcctatttgcctcccccagcagatgattctgctggcaaagactcgctcact
gatggctatgggtctccaggggagctggttaccgcaggcagtttcaccacgcctgatctc
ctggctgccgcagaggtggagagtgaagctgaagggaagcaagaactggctgatacagca
gaacctcctttcaaggaagtcgaccaagacagcctgtctggacaagcagttaagatcatg
gaagaaccagaatcatcaggtgacgacatttttgttacaaccagcacttacgaaagtttg
cctttctttactggtccaagtgatgtctctaccgtgcagcctggagctgttattacagat
gtgctgccatcaatagcaccgctgcctgcagccaccagcccgtcctacagcccctctgag
atcatcgagcagtcccttgagctaccagattcctcagcgccagcccctgagggtgttcct
gaggatggcactgggatgggagtgcaggacatcgctgctgagctggaccagatcggcgcg
atgagcacggcagcgctggacgagggggagcagggcagtggtgacatctcagagctgacc
actgagcctgcagaaaccaccccagcgccggtgctgaagtatgtaactaccagctccatg
acaactgcggccaaaggcaaagagctcgtggttttcttcagcctgcgggtaaccaacatg
cacttctctgatgacctcttcaacaggagttcgacagaatacaaagcgctggaacaacag
ttcatgcaattgctacttccataccttcagtccaaccttacaggttttaagcatttggaa
attctcaacttcaggaatggaagtgtgattgtgaacagcaaaatgaaatttgccaagaca
gtgccatacaatatcacagaagcagtacactgtgttctggaagatttctgtgatgctgca
gcccaacacctcaatttggagattgacagctattctctggatattgagccagctgatcag
gcagacccctgcaaattcatggcatgtgacaagttttccgagtgcgtaatgaacgagtgg
acaaaagaggccgactgcctttgcaagcctggctatgccagccaggatggattgccctgc
cggagcctgtgcgagctggagccccatctctgtgtcaacggtgggaaatgtgacctggtt
ccaggaagaggagctgtctgcagatgccctgtacgtagacaccagctttaccaaggacag
cgctgtgcaaagtttggtccagagcccacacaacccttcatttttaaacctctcattctt
ggcttaggaagccttggttttcttttcatcattttaattattcagataagaagaaaatgc
aaaagaaactctaatttgcaaagtcccactctcagcagcagcaatccagaaaatgctgta
aggattaatcctgcttttgaacacgatgaacccctatctagcttttgtcacacggcttgc
agtgtaagtgcttgtctcagtacctcagagatccttgatcacgaagcattacatgaactc
gaaaacacaattcagcctggaggtcaccagatgagtttacaaaaccaagagtga
DBGET
integrated database retrieval system
