Hirundo rustica (Barn swallow): 120756344
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Entry
120756344 CDS
T09369
Symbol
LAMC1
Name
(RefSeq) laminin subunit gamma-1
KO
K05635
laminin, gamma 1
Organism
hrt
Hirundo rustica (Barn swallow)
Pathway
hrt04510
Focal adhesion
hrt04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
hrt00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
120756344 (LAMC1)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
120756344 (LAMC1)
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Gene cluster
GFIT
Motif
Pfam:
Laminin_EGF
Laminin_N
Laminin_B
Motif
Other DBs
NCBI-GeneID:
120756344
NCBI-ProteinID:
XP_039928503
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Position
9:23839358..23906179
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AA seq
1600 aa
AA seq
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MGGGGERWALWLWVLWLWVPAPCGAAMDECAEERSGRAQRCMPEFVNAAFNATVLATHTC
GAPAEEYCVQTGVTGVTQSCHLCDAAQPHLSHGAAFLTDYNSPADATWWQSRTMLAGVQH
PTAVNLTLHLGKAFDITYVRLKFHTSRPESFAIYKRTQEDGPWVPYQYYSGSCESTYHKI
NRGFIRTGEDEQQALCTDEFSDISPLTGGNVAFSTLEGRPSAYNFDNSPVLQEWVTATDI
RVTLNRLNTFGDEVFNDPKVLKSYYYAISDFAVGGRCKCNGHASECVKNELGKLVCNCKH
NTFGVDCEKCLPFFNDRPWRRATAESANECLPCDCNGRSQECYFDPELYRATGHGGHCTA
CAGNTDGPRCERCRDSFYRLASDEACLPCSCNPVGSLSTQCDSYGQCSCKPGVMGDKCDR
CQPGFHSLSEAGCRPCSCNAAGSTGECNVETGRCACKDNVEGFHCERCKPGFFHLDPSNP
RGCTPCFCFGHSSVCTNAVGYSIYSITSNFEFGEDGWRAEQRDGSEVSLQWSAETQDISV
ISDTYFPMYFVAPRKFLGNQVLSYGQNLTFSFRVDRRDTRLSAEDLVLEGAGLRVSVPLI
AQGNSYPSENVQTYTFRLHEAADYPWRPALTTFEFQKLLHNLTSIKIRGTYSERSAGHLD
DVTITSARPGPGVPVAWVESCSCPVGYEGQFCERCTPGYRRESPSLGPYSPCVPCTCNGH
SETCDPETGMCNCRDNTAGPHCEKCGDGYYGDATAGTASDCQPCPCPGTSSCAIVPRTKE
VVCTSCQAGTTGKRCELCDDAYFGDPLGRNGAVRPCRLCQCNNNIDPNAVGNCDRQTGEC
LKCIYNTAGFYCDRCKDGFFGNPLAPDPSDKCKACHCNPYGTVNQQTICNQVTGQCECLS
HVTGRDCSACEPGFFNLQSGRGCERCNCHALGSTSGQCDIRTGQCECQPGVTGRHCDRCE
DNHFGFSSEGCKPCDCDPEGSRSLQCRENGHCECKEGFVGSRCNQCEENYFYNRSWPGCQ
ECPACYRLVKDKVAEQRQRLQELENLIANLGTREEAVTDEAFEERLKQAEREVMELLHEA
QKSKDADQGLMDRLRDINSTLVSQLNRLRNIQGTVQDTENLAEQARVRVEDTEDLISLAS
DMLEKAKVAADNVSITPPEQSGDPNNMTVLAEEARKLAERHKKEADEIVRTAKAANDTST
EAYQLLLKTLAGENQTAIDIDELNQKYSQARNISRDLEKQANKVLAEAEEAGNRALQIYA
NLTSLPTVDSTGLENEANKIKKEAEELDQLIARKLKDYEDLREDMKGKELEVKNLLEKGK
TEQQTADQLLARADAAKALAEEAARKSSGTLQEANTILSNLKDFDKRVNDNKTAAEEALK
RIPAISQTIAEANNKTQQAELALGNAAADAREAKARADGAEKIASSVQKSAAATRAEADK
TFADVTGLAREVDDMMKQLQDAEKELKRKQADAEQDMKMAGEASQAAQEAEDNARKAKNS
VNSLLTVIDDLLDQLGQLETVDLNKLNEIEGSLNSAKDQMKDSDLDQKVSFLEREAKKQD
DAIQAYNRDIEEILKDISNLEDIRKTLPSGCFNTPSIEKP
NT seq
4803 nt
NT seq
+upstream
nt +downstream
nt
atggggggcggcggcgagcgctgggcgctgtggctgtgggtgctgtggctgtgggtgccc
gcgccgtgcggcgctgcaatggacgagtgcgcggaggagcggagcgggcgggcgcagcgc
tgcatgcccgagttcgtgaacgcggcgttcaacgctacggtgctggccacgcacacgtgc
ggggcgccggccgaggagtactgcgtgcagaccggggtcaccggcgtcacccagtcctgc
cacctctgcgacgccgcccagccgcacctgagccatggcgccgccttcctcaccgactac
aacagtccggccgacgcgacctggtggcagagccgcaccatgctggccggcgtgcagcac
cccaccgccgtcaacctcaccctgcacctgggaaaagcctttgacatcacgtatgtgcgc
ctgaagttccacaccagccggcccgagagctttgccatctacaagcgcacgcaggaggac
ggcccctgggtgccctaccagtactacagtggctcctgtgagagcacctaccacaaaatc
aaccgtggcttcatccgcacgggcgaggacgagcagcaggcgctctgcaccgatgagttc
agcgacatctcccctctcaccggaggcaacgtggccttctcaacgctggaggggcgtccc
agtgcctacaactttgataacagccctgtgctgcaggaatgggtgacggctacagatatt
agagtgaccctcaatcgtctgaacacatttggagatgaagttttcaatgacccaaaagtt
ctcaagtcttactactatgcaatttctgattttgctgtgggtggtaggtgcaaatgcaac
gggcacgcgagtgagtgtgtgaagaacgagctcgggaaactggtctgcaactgcaagcac
aacacctttggggtggactgtgagaagtgccttcctttcttcaatgaccgcccgtggagg
agagcgacggcggagagcgccaacgagtgcctgccgtgcgactgcaacgggcgatcccag
gagtgctacttcgaccccgagctgtaccgcgccacgggccacggcggccactgcaccgcc
tgcgccggcaacacggacgggccgcgctgcgagcgctgccgcgacagcttctaccgcctg
gccagcgatgaggcctgcctgccgtgcagctgcaaccccgtcggctccctcagcacacag
tgcgacagctacggccagtgcagctgcaagcccggtgtgatgggggacaagtgtgaccgg
tgccagccagggttccactccctctctgaagctgggtgcaggccctgttcttgcaatgct
gctggcagtacaggggaatgcaatgtcgagacagggcggtgtgcgtgcaaggacaacgtg
gaaggattccactgtgagagatgcaaacctggatttttccatctggatccctccaatcca
agaggctgtaccccctgcttctgttttggacactcttcagtctgcaccaatgctgtgggc
tacagtatctatagcatcacctccaacttcgagtttggagaggatgggtggcgtgctgag
cagcgcgatggctcggaagtctcgctccagtggagtgccgagacccaggatatctctgtt
atctcagacacctacttccccatgtacttcgttgcaccacgcaagtttttgggcaaccag
gttttgagttacgggcaaaacctgaccttctccttccgtgtggacaggcgggacacgcgc
ctctctgcagaggacctggtgctggaaggggctgggctgagggtgtcggtgcctctcatt
gcccagggcaactcctaccccagtgagaatgtgcagacctacaccttcaggctccatgag
gctgcagattacccgtggaggcctgctcttacgacatttgaattccaaaagcttctccac
aacttgacttccatcaagatccgtgggacatacagtgagagaagtgccggtcacctggat
gatgtcaccatcacaagtgctcgtcccggccccggcgtgcctgtggcctgggtggagagc
tgctcgtgtccggtggggtacgaggggcagttctgtgagcgctgcacccccggctaccgg
cgagagagcccgagcctcgggccctacagcccctgcgtgccttgcacgtgcaacgggcac
agcgagacgtgtgatcccgagacgggcatgtgcaattgcagggataacacggcggggcct
cactgcgagaagtgcggcgatgggtattacggcgatgccacggccggcacggcctcggac
tgccagccctgcccgtgcccaggcacctccagctgtgccattgtgccccgcaccaaggag
gttgtgtgcaccagctgtcaggctggcactacaggcaagaggtgtgagctgtgtgatgac
gcctatttcggagaccccctgggcagaaacggtgccgtgaggccctgccgcctgtgccag
tgcaacaacaacatcgaccccaacgccgtgggcaactgcgaccgccagaccggcgagtgc
ctcaagtgcatctacaacacggccggcttctactgcgaccgctgcaaggatggcttcttt
gggaaccccctggcccctgacccctctgacaagtgcaaagcttgtcactgcaatccctac
ggcacagtgaatcagcagacgatctgcaatcaagtgactgggcagtgtgagtgcttgtct
cacgtcactgggagggactgcagtgcctgtgagcctggattcttcaacctccagagtgga
cgtggctgtgagaggtgcaactgccacgcgctgggctccaccagcgggcagtgtgacatc
cgaaccgggcagtgcgagtgccagccaggcgtcaccggccggcactgtgacagatgtgag
gacaaccacttcggctttagctcggaaggctgcaaaccctgcgactgtgatcccgagggc
tcgcggtccctgcagtgccgggagaacggccactgtgagtgcaaggagggcttcgtgggg
agccgctgcaaccagtgcgaggagaactatttctataaccgctcgtggccaggctgccag
gagtgtccagcctgttacagactagtgaaagataaggtggcggaacaacgtcagaggcta
caggagttggaaaatcttatagctaatctgggtaccagagaagaagctgtaactgatgaa
gcctttgaagagcggttgaagcaggcagaaagagaagtcatggagttgctccatgaagca
cagaagagcaaagacgcggatcagggcctcatggatcgtctcagagacatcaacagcacc
ttagtgagtcaactcaacaggctgaggaacatccagggcacagtgcaggacacggagaac
ctggcggagcaggcccgggtgcgggtggaggacactgaggacctgatcagcttggcttct
gatatgctggagaaggccaaggtggcagctgacaacgtgtccattacacctccagagcaa
agcggggaccccaacaacatgactgtgttggcagaagaggcccgtaagctggcagagagg
cacaaaaaggaagctgatgagattgttcgcacagccaaggctgcaaatgatacttccacg
gaagcatatcaactgctgctgaagaccctggctggagaaaaccaaactgcaattgatatt
gatgagctcaaccagaagtacagccaagcaaggaatatttctcgagacctagagaaacag
gccaacaaggtacttgcggaggcagaggaagctggaaacagagccctgcagatctatgct
aatctcaccagcctgcctactgtggattccacggggctagagaatgaagcaaataagatc
aagaaggaagcagaggaactggatcagctaattgccaggaagctaaaagattacgaggac
ttgagagaagatatgaaaggaaaggagctagaagtaaagaacctcttagagaaagggaag
acagagcagcagactgcagaccagctcttggctcgagcagatgcagcaaaagccctggct
gaagaagctgcccggaagagcagtggcacactacaggaggccaataccattctcagcaac
ctgaaagactttgataagcgggtgaacgataacaagacggcggccgaggaggcgctgaag
aggatccctgccatcagccagaccatcgcagaggccaacaacaagacccagcaggccgag
ttggcactgggcaatgcagctgccgacgcccgcgaggccaaggccagagcagatggtgct
gagaagatcgccagctccgttcagaagagtgctgctgctaccagagctgaagctgacaag
acctttgctgacgtgacaggactggccagggaagtggatgacatgatgaagcagctgcag
gatgcagaaaaagagctgaagcggaagcaggccgatgctgagcaagatatgaagatggca
ggcgaggcctcacaggctgcccaggaggcggaagacaatgcaagaaaagctaagaactct
gtgaacagcctactcactgtcattgatgacctgttggatcaactagggcaactggagaca
gtggatttgaacaaactgaatgaaattgaaggttccctgaacagtgccaaagaccagatg
aaagacagtgacctggaccagaaggtttctttccttgagagagaagccaagaagcaagat
gatgcgatacaggcctacaacagggacattgaagagatcctgaaggacattagcaacctg
gaagacatcaggaagaccttgccatcgggctgtttcaacaccccgtccattgagaaaccc
taa
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