Hirundo rustica (Barn swallow): 120758378
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Entry
120758378 CDS
T09369
Symbol
MBD4
Name
(RefSeq) methyl-CpG-binding domain protein 4
KO
K10801
methyl-CpG-binding domain protein 4 [EC:3.2.2.-]
Organism
hrt
Hirundo rustica (Barn swallow)
Pathway
hrt03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
hrt00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
120758378 (MBD4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
hrt03036
]
120758378 (MBD4)
03400 DNA repair and recombination proteins [BR:
hrt03400
]
120758378 (MBD4)
Chromosome and associated proteins [BR:
hrt03036
]
Eukaryotic type
Heterochromatin formation proteins
MBPs (metylated DNA binding proteins)
120758378 (MBD4)
DNA repair and recombination proteins [BR:
hrt03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
120758378 (MBD4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MBD
HhH-GPD
Motif
Other DBs
NCBI-GeneID:
120758378
NCBI-ProteinID:
XP_039932491
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All DBs
Position
12:complement(20487852..20491432)
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AA seq
513 aa
AA seq
DB search
MAAPGAGGPGGGSRGAAAAERLGPSPGCGDHGPAGPSAAPRGWQRVSSRRRAGRTAGRID
VYFVSPEGKKLRSKRALVEYLQKTGETTLKAADFDFTTPRRNTCLGLRSYGTGAARTDLE
KEDCQSKLQELHAQNGAEVGIQDIQAGNGHLEDATSTVESTDLVTEGTNPEQSLKIKRKR
ADGKSVQTRKRGKGSERRNQGDPKSKRQRRISNTRETKCVQTKRGHRQTDMRGADSRGDP
GADPVDAGKALSGMSRAQLRSLAGSQGELGHLPKEGPCSSDTPAARSEEKSSGLETGRVP
DSGDLAKQNVKSDTEVDAEPWDRTSFPAVRMAPEESVPRTQVERRKTSPYFSSKYSKEAP
SPPRRKALRKWTPPRSPFNLIQETLFHDPWKLLIATIFLNKTSGKMAIPVLWEFLKKYPS
PEVARAADWKEMSELLKPLGLYELRAKTIIRFSGEYLSKAWRYPIELHGIGKYGNDSYRI
FCVNEWKEVQPQDHKLNVYHSWLWENRERLSID
NT seq
1542 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgccgggagcgggcggccccgggggcggcagtcgaggcgcggcggcggcggaa
cggctcggccccagccccggctgcggggatcacggtccggcggggcccagcgccgccccc
cgcgggtggcaacgggtgagcagccgcaggcgggcgggcaggacggccgggaggatcgac
gtttacttcgtaagccctgaagggaagaagctgagatcaaaaagagcacttgtggagtat
ttacagaaaactggggagacaacactgaaagcagcagattttgatttcacaactcctcga
aggaacacgtgcttggggttgaggagctatggcacgggagctgcaaggactgacttggaa
aaggaggattgtcagagcaaattgcaggagctgcatgcacagaatggtgctgaggttgga
attcaggacatccaggctgggaatggacacctggaagatgctacatctactgtggaaagc
acggatttagtaacggaaggaacaaacccagagcagagtttgaaaatcaaaagaaagagg
gcagatgggaaaagtgtccaaactaggaaacgtgggaagggctcagaaaggaggaaccaa
ggtgaccccaagagcaagaggcagagaagaatctctaacacacgggagaccaagtgtgtt
cagaccaagaggggccacagacagacagacatgcgtggagctgacagccggggtgatcca
ggtgctgaccctgtggatgcagggaaagctctgtcaggaatgtccagggcacagctgagg
tcattggctggctcacagggggagctgggtcacctgccaaaggaggggccatgctcaagt
gacacacctgctgcgaggtctgaggagaaatcctccggactggagacagggagagtgcca
gattcgggggatctggctaagcagaatgttaaatctgacaccgaggtggatgctgagccg
tgggacaggacaagtttcccagcagtcagaatggcaccagaagagtctgtcccacgaaca
caagtggagagaaggaaaacgagtccatatttttccagtaaatacagcaaagaagccccc
agcccacccagaaggaaggccctcagaaaatggactcctccacgttctcctttcaatctt
atccaagaaacactcttccatgatccatggaagcttctcattgccaccatatttctcaac
aaaacttcagggaaaatggccattccagtgctttgggagttcctgaagaagtatccttct
cctgaggtagccagggctgcagactggaaagagatgtcagagctactcaaacctcttggt
ctctacgaactgagagccaaaaccatcatcaggttctcaggtgagtacctgagcaaggcg
tggcggtacccaatcgagctgcacggcattggcaagtacggcaatgactcctacagaatc
ttctgtgttaacgaatggaaggaggtgcagccacaggaccacaagctgaatgtgtaccac
tcgtggctgtgggagaaccgggagaggctgagcatcgactga
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