Hirundo rustica (Barn swallow): 120761636
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Entry
120761636 CDS
T09369
Symbol
SEC16A
Name
(RefSeq) protein transport protein Sec16A isoform X1
KO
K20353
COPII coat assembly protein SEC16
Organism
hrt
Hirundo rustica (Barn swallow)
Brite
KEGG Orthology (KO) [BR:
hrt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
hrt04131
]
120761636 (SEC16A)
Membrane trafficking [BR:
hrt04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
120761636 (SEC16A)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec16_C
Sec16
Motif
Other DBs
NCBI-GeneID:
120761636
NCBI-ProteinID:
XP_039938995
LinkDB
All DBs
Position
20:complement(2615166..2646745)
Genome browser
AA seq
2426 aa
AA seq
DB search
MQQPPQPVPPGAAPPPAAGVARNMYWRNSPLSKRANAAAAPVQPVTDPFAFGKQTPQGSP
LDNASKGNAPAFPQPALVHPLPARAGDNPHGPHTSLPAPVSQAGISTNTFSNAPVPSPSL
GYGINSAAEGHPNADLGLRAPAVPLHYNPGAAVENSLGVHPGMVSAASKPGARQDVGRDP
NDAPSAPNAAALFPPPPQQPGSQWRPVPGNLQSPVRNFVPYPEPSAQTDVHNISQPSVSA
SHPPPHANVPQGPGLQGVPQNIVQAPLSAGGEKSGKNGPANSSQHMNSVQPGNVFRQNTE
MTNPWLSQPYQEQFYPQPPLRDSGFVLPTAQENNPKTQSSAMSETSNRSVPSDRDPGTLS
MFFKGDEAENEEILSSEKNYVMEKTEFDAGQQNSASLYHQPVHPQQVATNILSQAQLGTG
SAGEMVQKGMDVQYFPKLVSHQEAQAAKHSLFAGGDKAQLGDTAAGSQYENVENLECIQN
QEVLPSGPQNINASSPAAGPDPYRYGSFLPQMLPKNAAVSHAEGGPNLEAPDSLPHPVRP
DSVSSNYSTVSHRSASSSARPPEQAGTFIQQEIGKPEEESSASFFKQIDSSPLGGDSGEL
NLSKNYHGNLSQPPTPSPPKPTGVFQTSANSSFEPVRSHGVGIKPAEIDQAKMVVELREN
HSNQKNIKKSTAVPAASPGNLEQPPDNLETIYMPQVHPGPLAGAGEAGNTLHSGPVVENI
QSVSERRSSTRAQGAVKKCDSPATTLWAHNELPNFGGNVLLAPAAPAVYVPAKQTVEVIQ
PPEEGLSNQQPCKPGTIAVQHSQDGNITFENLENPPKMGEEEALQSQASSGYASLLSSPP
TESLQNQPILIAQPNQSYNLAQPINFSISLSNQLSNNENNHPMKDSGVGDKPAMGPQTSH
AGGENMPLPVMQVGSLLVNALPNTNLLKHNLLQSPVNSPDAASNQPANLLMKTPLNLTPE
GQKNVNMEGLVPEFASKPGSNSSVSPGTNLPSGSASGLVPPINSIAQANNSANQSSSKEA
AGALDFTVSRTLEKSSTSNSGHSQSPSGAPVQQAAGGGGQARAEAPDKQHFYQQVTKDVQ
HQAVAERAAQGSLPPQPQMQAAQMQPPTSGQSSVPPDSQISTGGKAVQQGENQALGTRAQ
PGGPQEAGSAQPRYDQTSPGKQPVSEQPPGAPAAAAPPATAAQAVPPNGQQDLQRPPPPQ
TPQEAFGPPQNPYYYYRHPYDAYQAPYPPYPPADPRTAHLYYMEDSYGQYDPRYRHYDSS
SAAYMEPGSYRYPEPERPSSRASHCSDRPSSRQGYTEDYYGKSGWSDYYSGYYPNSYDYG
DPSRWERYPYDPRYRDPRSYDQRYWYDAEHNPYQKREAYPYGSRNDRYEDNWRYDPRFTG
SFDDDSEPHRDPYGDEFDRRSVHSEHSGHSLRSSRSVHSHHSSFSSRSQQSQLYRSNHDL
TGNAYEPPAQAVSLHAEYPYGGYDPSFSGQQPFTDYGYPAETGWSAVEQAPLRPSTPEKF
SVPHICARFGPGGFLIKALPNLPSEGQPALVEIHSMETMLQHSPEQEEMRAFPGPLAKDE
THKVDVINFAQSKAAQCFKNENLIDKESASLLWDFIVLLCRQNGTVVGTDLAELLLRDHK
TVWLPGKSPNEANLIDFTNEALEQVEEESGEAQLSFLTDNLLTTVDSFEKETERFRELLL
YGRKKDALESAMKHGLWGHALLLASKMDSRTHARVMTRFANSLPINDPLQTVYQLMSGRM
PAASTCCGDEKWGDWRPHLAMVLSNLTNNVDLESRTIATMGDTLASKGLLDAAHFCYLMA
QVGFGVYTRKTTKLVLIGSNHSLPFLKFATNEAIQRTEAYEYAQSLGSQPGCLPNFQVFK
FIYACRLAEMGLAAQAFHYCEVISRTVLKDPHYYSPVLIGQLIQMSSQLRLFDPQIKEKP
EQESFIEPSWLVTLRHVDGQIKEGAIAYTTDRSTPPPYECSTPSSELDRASQCDGGGGRD
VGPGAENALLASLLPNMAQQMQSVQLMPSVPQAVLDGSAAMIPPGDQGSVPFYPVAPQPL
GPGPGFAPQGFSNPYGTEPSPVYLGSTLPPGGPPQEMEPQPEEQKNLETGMQRIAPESPA
QNSFPEQREDDFYGRMANMGYERRSRTTSESSAHSVGRERSNSAAKQPSPPPSAPAGKET
KKETKKEAAPRKSGATWFRWLMGKGKNEAHLPDDKNKSIVWDEQKQRWVNLDEPEEESKP
PPPPPTGFPKAAQAAPPGPGGPPGAPVNVFSRRAAGSRARYVDVLNPGGTKASGAVPAPS
DLFAPLAPMPIPANVFVPNSVPGESQPMEGSGAAEPTAAANQTNTDPAAAVEPEYLNPAA
LPPGSGLHVPNPDGSQSGELSRSSSMSSLSREVSQHFNQPATVPPSGTPSAGAVPFYNPS
QFAQSPAATGSSRLGRIGQRKYPTLK
NT seq
7281 nt
NT seq
+upstream
nt +downstream
nt
atgcagcagccaccgcagcctgtccctccaggggcggctcctcctcctgccgccggcgtg
gctcggaacatgtactggaggaacagcccgctcagcaaacgggcaaacgccgcggctgcg
ccggtgcagcccgtgacagacccgtttgcctttggcaagcaaaccccccagggctcccct
ttggataacgcatccaagggcaacgccccggcgttcccacagccagccctggtgcatccg
ctgcccgcccgcgccggggacaaccctcatggaccacacacgtctctgccagctcccgtg
tctcaggcggggataagcaccaataccttttccaatgctccggttccttctccgtccctg
gggtacggtataaacagtgctgcagaagggcatcccaacgccgatctcggactccgtgcg
cctgcagtgcccctgcattataacccgggagcagcagtggagaattctttgggcgtgcat
cccggaatggtgtctgcagcgagcaaacccggagctaggcaggacgttggcagagatcca
aatgatgcaccttcagcacccaacgcggcagcgctcttcccaccgcctccccagcagcct
gggtcccagtggaggcccgtcccagggaatctgcagtctccagttcggaattttgtgccc
tatcctgagccgtctgctcagactgacgttcataacatttctcagccttccgtcagcgct
tctcaccctcctccacatgcaaatgtcccgcagggtcctggactccaaggtgttccacaa
aacatcgtgcaagcgcctttatccgccggtggtgagaagagtggcaaaaacggccctgca
aacagcagtcagcacatgaacagcgtccagcctggaaatgtgtttaggcagaacacggaa
atgactaacccttggttaagccagccttaccaggaacagttttacccacagccacctttg
cgagactccggttttgtccttcccacagctcaggaaaacaaccccaaaacccagtcttca
gctatgtctgaaacgtcaaataggtctgtcccctcggatcgagatccgggaactctctcc
atgtttttcaaaggggatgaggcagaaaatgaagaaatactttcatctgaaaaaaattat
gtgatggagaaaacagagtttgatgccggtcagcaaaattcggcctccctgtatcaccag
cccgtgcatcctcagcaggtggcaaccaatattctctctcaggcacagctgggaacgggt
tcagctggtgagatggtacagaaaggaatggatgtccagtacttccctaaactcgtcagc
catcaggaggcacaggctgctaagcactctctgtttgctggtggtgacaaggcacagcta
ggcgacacagctgctgggtcccagtacgaaaatgtggagaacctggagtgcattcagaat
caggaagtgctgccgagcggaccacagaacatcaatgcctcatcccctgctgccggcccc
gatccgtacaggtacggatccttcctgcctcagatgcttccaaagaacgctgctgtgagc
cacgccgaaggaggaccaaacttggaggcacctgattccttacctcaccccgtccgacca
gacagcgtctcttccaactacagcaccgtcagccacaggagcgcctccagctcagcacgg
cccccggagcaagccggtacgtttatccagcaggaaattgggaagcccgaggaggaatcc
tctgccagcttcttcaaacagattgactcctctcctctggggggtgattcgggtgagcta
aacctgagcaagaactaccacggcaatctatcccagcctcccactccaagtcctcccaag
cctaccggagtgtttcagacaagtgcaaatagttcttttgaacctgtgaggtcccatgga
gttggtataaaacctgcagagattgaccaagcaaagatggtggttgaattaagagagaac
cactcaaaccaaaagaatatcaagaagagcacagcagtgcctgctgcatcccctggcaat
cttgaacagcccccagataatctggaaacaatttacatgcctcaggtacacccagggcct
cttgcaggcgctggggaagctggaaacacgctgcactctgggcctgttgtggaaaatata
caatcggtgtctgagagaaggtcctcaaccagagctcagggagcagttaagaagtgtgat
agcccagcaacaactctgtgggctcacaatgagttaccaaattttgggggaaatgttctc
ctagctcctgctgctcctgcagtgtacgtacctgccaaacagactgtggaagtcattcag
ccaccagaagaaggtttgtctaaccagcagccgtgtaaaccagggactattgctgtgcag
cactcccaggatggaaatataacttttgaaaatcttgagaaccctcccaaaatgggagag
gaggaagcacttcagtctcaggcaagttctggttatgcaagtttattgtcttctccacct
acggagtctttgcaaaatcagcctatcctgattgctcagcctaatcaaagctataacttg
gctcagccaattaatttttctatttctctatctaatcagctaagcaacaatgaaaacaat
cacccaatgaaggactctggagttggggacaagcctgccatgggtccccaaacttcacat
gctggtggggaaaacatgccgttacctgtgatgcaagttggatctctcttagttaacgca
cttccaaatactaatctgttaaaacataatttattacaaagtcctgttaattctcctgat
gctgcttctaatcagcctgcaaacttgcttatgaaaactcctcttaatttgactccagaa
gggcaaaagaatgttaatatggaaggcctcgttcctgaatttgctagcaagccagggtct
aactcatctgtttctcctgggacaaatcttcccagtggaagtgcaagtggcttagtcccc
cctattaattccatagcacaggccaataactctgcaaatcaatcaagtagcaaagaagct
gctggagcgctcgacttcacggtgtcacggacgttggagaaaagcagcacaagtaattct
ggccacagccagtcaccctctggtgctccagtgcaacaggcggccggtggtggtggtcag
gcgcgtgccgaggcgcctgacaagcaacatttctatcaacaggtgacaaaagatgtgcag
caccaggctgtagcagagcgagctgcacagggatcgctgccaccccaaccacagatgcaa
gcagctcaaatgcagccaccaacatctgggcagtcctcagttcctccggactcccagatt
tccactgggggtaaagccgtgcagcagggggagaaccaggctctgggtacccgtgcccag
cctggggggccccaggaggcaggttcagcccagccaaggtacgaccagacgagtcccggg
aagcagccggtgtcagagcagcctccaggtgctccagctgccgcagcccctcctgccacc
gctgctcaggcagtgccacccaacgggcagcaagacctgcagcgtccaccccctcctcag
acccctcaggaagcctttggtccaccccagaacccttactactactacagacatccttac
gatgcttaccaggccccatatccaccttatcctcctgcagaccccaggacagctcacctt
tattacatggaggacagctatgggcagtatgacccccggtaccgacactacgacagcagc
agcgctgcctacatggaacccgggagttatcgctaccccgagccggaacggcccagctcc
agggccagccactgctctgacagaccttcctccaggcaagggtacacagaagattattac
ggaaaaagtggatggagtgattattattcaggctattacccaaactcctatgattatgga
gatccgagtcgctgggaacgatacccatacgaccccaggtacagagacccgagaagttac
gaccagaggtactggtatgatgctgagcacaacccttatcagaagagagaagcgtatcca
tatggcagcaggaatgaccgatacgaggataactggaggtacgatccccgtttcacgggc
agctttgacgatgactcggagccgcacagggatccctacggggacgagtttgaccggcgc
agcgtccacagcgagcactccggccacagcctgcgcagctcccgcagcgtccacagccac
cacagcagcttcagctcccgctcccagcagagccagctctacaggagcaatcacgatcta
acgggcaatgcctacgaacctcctgcacaggcagtgtcgctccatgcagagtatccctac
ggaggctatgatcccagcttcagtggacagcagcctttcacagactatggctaccctgct
gagacgggctggtcagctgtggagcaagcaccattaaggccctcaacacctgagaaattt
tcagtgcctcatatctgtgccaggtttgggcctgggggcttcttaataaaagcactgcca
aacctgccttctgagggtcagccagctctggttgaaatccacagcatggagactatgttg
caacattccccagagcaagaagagatgagagcctttcctggtcctcttgctaaggatgag
acccataaagtggatgttattaattttgcacaaagtaaagctgcacagtgcttcaagaac
gaaaatttaattgacaaagaatctgcaagtcttctttgggactttattgtactgttgtgt
aggcagaatgggactgttgtgggaacagacctggctgaacttctgctccgagatcataaa
acagtgtggcttcctgggaagtcccctaatgaggcaaatttgattgatttcactaatgag
gctttggaacaagtggaagaggaatctggtgaagcccagctctcatttctcactgataat
cttctaaccacagttgacagttttgagaaggagactgagagattcagggagctgctgctt
tatggccgtaagaaagatgctttggagtctgccatgaagcatggtttgtggggtcatgct
ctgctccttgccagcaaaatggacagcaggacacacgccagagtgatgaccaggtttgcc
aacagtctcccaattaatgaccctctgcagactgtttaccagctcatgtctggaaggatg
ccagctgcatccacgtgctgtggagatgagaaatggggagactggaggcctcatctagca
atggtgttatccaacttgaccaataacgtggacttggaatccaggaccattgctaccatg
ggagacactcttgcttctaaaggcctgctggatgctgctcatttttgttaccttatggcc
caagttgggtttggagtttacacaaggaagacaacaaagcttgtcctaattggatcaaat
cacagcttgccatttttaaagtttgccaccaatgaagctattcaaagaactgaagcctac
gaatatgcacagtcactaggaagtcagcctggctgcttgcccaatttccaggttttcaag
ttcatttatgcctgtcggctggctgagatgggcctcgctgcccaggctttccactactgc
gaggtgatttccagaacggtcctcaaagatccacattactattcccctgtgctgattggc
cagctgatccagatgtcatcccagctgcgcctgtttgaccctcagataaaagaaaaacca
gaacaggaatcttttattgaaccctcctggttagtcacacttcgacatgtggatggacag
atcaaggagggtgcaatagcctataccacagacagatccacgccccctccctatgaatgc
agcactcccagctctgaactggaccgtgccagtcagtgtgatgggggaggaggccgtgac
gtggggccaggtgctgaaaatgccttgctggcatccttgttacccaatatggctcaacag
atgcagagcgtgcagctgatgccttcagtacctcaggctgtccttgatggctcagctgcc
atgattcctcctggtgaccagggaagtgtccccttctacccagtggctcctcagcctctt
ggtccaggacctggctttgcacctcaaggattttcaaatccctatggaactgaaccatcc
ccagtatatttggggtcaacactacccccaggagggccaccacaagaaatggaaccacag
ccagaagagcagaaaaacctggaaacaggaatgcagagaattgccccagagtctcctgca
caaaactccttccctgaacagagagaggatgatttctatggcagaatggctaacatgggc
tatgagcgaaggtcccgaacaacttcagagtcctctgctcattctgtgggacgagagaga
tccaactctgcagcaaaacaaccctctcctcctccctctgctcctgcagggaaagagact
aaaaaagaaacaaaaaaggaggcagcacctagaaagtctggtgcaacctggtttcgctgg
ctgatgggaaaaggaaagaatgaggctcacctgccagatgacaagaataaatcaattgtt
tgggatgagcagaaacaacgttgggttaatctggatgaaccagaagaagagagtaaacct
cctccaccacctcccacaggatttcccaaagctgctcaggctgctccccctgggcctgga
ggcccacctggtgctcctgtcaacgtgttctccaggagagcagctggaagcagagcccgt
tatgtggatgttctgaatcccggaggaaccaaggcaagtggtgctgttcctgcgccgtca
gacctgtttgcccccctggcaccaatgcccattcctgccaacgtgtttgttccaaactca
gttccaggggaatcccagcccatggaagggagcggagcagcagagcccacagcagctgca
aaccaaaccaacacagaccctgctgcagctgtggaaccagagtacttaaaccctgcagcc
cttcctcctggatctggacttcatgttcctaaccctgatggctcccagtcaggcgagctt
tcgcgctctagttcaatgagttcattatcacgtgaagtaagccagcattttaatcagcct
gccactgttccaccctcggggacaccttcagcaggagcagtaccgttctacaacccctct
caatttgcacaatctcctgcagccactggaagttcaagactgggaagaattggacagagg
aagtatccaacattgaagtag
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integrated database retrieval system
