Hirundo rustica (Barn swallow): 120763044
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Entry
120763044 CDS
T09369
Symbol
SRRM1
Name
(RefSeq) serine/arginine repetitive matrix protein 1 isoform X2
KO
K13171
serine/arginine repetitive matrix protein 1
Organism
hrt
Hirundo rustica (Barn swallow)
Pathway
hrt03013
Nucleocytoplasmic transport
hrt03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
hrt00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
120763044 (SRRM1)
03015 mRNA surveillance pathway
120763044 (SRRM1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hrt03019
]
120763044 (SRRM1)
03041 Spliceosome [BR:
hrt03041
]
120763044 (SRRM1)
Messenger RNA biogenesis [BR:
hrt03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
120763044 (SRRM1)
Spliceosome [BR:
hrt03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
SR-related proteins
120763044 (SRRM1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PWI
BAF1_ABF1
Motif
Other DBs
NCBI-GeneID:
120763044
NCBI-ProteinID:
XP_039941972
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All DBs
Position
25:538489..552422
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AA seq
859 aa
AA seq
DB search
MSKVNLEVIKPWITKRVTEILGFEDDVVIEFIFNQLEVKNPDSKMMQINLTGFLNGKNAR
EFMGELWPLLLSAQENIAGIPTAFLELKKEEIKQRQIEQEKLASMKKQDEDKEKRDKEDK
DSREKRDRSRSPRRRKSRSPSPRRRSSPVRRERKRSHSRSPHHRTKSRSATPAPEKKEAT
PEPEPSVKPKETLVQEATSNSDIPKAPKPEPPVPETKETSPERNSKKEREKEKEKTRQRS
PTRSKSRSRSRSRSPSHSRPRRRHRSRSRRRPSPRRRPSPRRRSPPRRMPPPPRHRRSRS
PVRRRRRSSASLSGSSSSSSSSRSRSPPKKPPKRPASSPPRKTRRLSPSASPPRRRHRPS
PPGSPPAKPRRSPTPQQSNRARKSRASVSPGRASAPKHKSTEKRESPSPAPKPRKAELSE
SEDKGGKMAAADSVQQRRQYRRQNQQSSSDSGSSSSSEEERPKRSNVKNGEVGRRRRHSH
SRSPSPSPRKRQKESSPRMQMEKRWQSPVMKSRRRRSPSPPPARRRRSPSPAPPPRRRRS
PSPPRRRSPSPPPRRRSPSPRRYSPPIQRRYSPSPPPKRRTASPPPPPKRRASPSPQSKR
RVSHSPPPKQRSSPTAKRRSPSVSSKHRKGSPPSRSNRETRSPPQNKRHSPSPRPRASHP
SSSPPPPRRGASASPQRRQSPSPSTRPIRRVSRTPEPKKTKASTPSPRRVSSSRSASGSP
ETAPKKHQGPASPARSRSPSANWSPAKKAKSPTQSPSPARNSDQEGGGKKKKKKKDKKHK
KDKKHKKHKKHKKEKAAAAAAAAAVVAPDTTSVQGDQEAETEPKKETESEPEDNLDDLEK
HLREKALRSMRKAQVSPPS
NT seq
2580 nt
NT seq
+upstream
nt +downstream
nt
atgagcaaagtaaatctggaagtaatcaaaccatggataacaaaacgagtaacagaaatc
cttgggtttgaagatgatgtagtaattgaatttattttcaaccagttggaagtgaagaac
ccagattccaaaatgatgcaaatcaacctgactggttttttgaatgggaaaaatgctagg
gagttcatgggagaactgtggccactgctattaagtgcacaagaaaacattgctggtatt
ccaactgcatttctggaactgaagaaagaagaaataaaacaacgacagatagagcaggag
aaactggcttccatgaagaaacaagatgaagacaaagagaagagagataaggaagacaaa
gacagcagagagaaaagagacagatccaggagtccaagaagacgcaagtcgcgctctccc
tccccgcgccggaggtcgtcgcccgtgcgccgcgagcggaagcgcagccactcccgctcc
cctcaccaccgcaccaagagccgcagtgccacccctgcccctgagaagaaagaggccact
cctgagccagagccctccgtgaaaccaaaggagactcttgtgcaagaggcaacttcaaac
agtgatatcccaaaagctcctaaacctgaacctcctgtaccagagactaaggaaacttca
ccagaacgtaattcaaagaaggagagagagaaggagaaggagaagactcgtcagagatcc
ccaactcgatccaagtccaggtcaagatcccggtcccgttctccatctcactctcgaccc
agaaggcgccatagatcacggtcaaggaggcgacccagcccgcggcgccggccgtccccg
cgcaggaggagcccgccccggaggatgcctcccccacccaggcacaggaggagcagatcc
cccgtgaggcggagaaggcgctcctcggcctcgctgtccggcagcagctcctcctcgtcc
tcgtcgcgctcccgctctccaccaaagaagcctcccaagagacccgcgtccagccccccg
cgcaaaacgcgccggctgtccccctctgccagccccccgcggcgccgccaccggccctcg
ccccccggcagccccccggccaagccgcgccgctcgcccacgccgcagcagtccaaccgc
gcccgcaagagccgcgcctccgtctcgcccggcagggcttcggcacccaaacataagagc
actgagaaaagagaatcgccttcgccagcacccaagcccaggaaagcagaattgtcagaa
tcagaagacaaaggaggcaaaatggctgcagcagattctgtccaacagaggcgccagtac
aggaggcaaaatcaacagtcttcatctgattctggttcttcatcttcctcagaagaggag
aggcccaagaggtcgaacgtgaagaacggggaggtgggcaggcgccgccggcactcgcac
tcgcgcagcccctcgccctcgccccgcaagcgccagaaggaatcctcccctcggatgcag
atggaaaagaggtggcaatccccagtgatgaaaagcaggaggaggaggagcccctcgccg
ccccccgcgcgccggcgccgctccccttccccggctccgccgccccggcgccgccgctcc
ccgtccccgcctcgccgaaggtctccatcgccgcccccgcgcagacgttctccctctcca
cggagatactcccccccgatccagaggcgatactccccatctccccctcccaagaggaga
acggcttctcctcctccccctcccaagagaagggcctccccttccccccagtccaagcgc
agagtctcccactccccaccgccaaagcagaggagctcccctactgctaagcggcgctcc
ccttccgtatcttccaagcacaggaaggggtctcctcccagcagatccaacagggaaaca
cgttctccaccacaaaacaaaaggcattcaccttcaccacggcctcgagcttcccacccc
tcctccagccctccgccgccgcgccggggagcgtcggcgtcgccgcagaggagacagtca
ccctcacccagcaccaggcccatcaggagggtgtccagaacaccagaacccaagaaaaca
aaggcttccacccccagcccccggcgtgtgtcctcgtcccgatctgcgtcagggtcacct
gagacagctcccaagaagcaccaaggacctgcatctcctgcccgctctcgctctccttct
gcaaactggtcacctgcaaaaaaggccaagagcccgactcagagcccatcacctgccagg
aattcagatcaagaaggtggtggcaagaagaagaagaaaaagaaggataagaagcataaa
aaggataaaaagcacaagaaacacaaaaagcataagaaggagaaggcggcggcggccgca
gcagctgctgctgtggttgcaccagacaccacctcagtacagggagaccaggaggcagag
acagaacccaaaaaggagacagaaagcgaacccgaggacaacctggacgacctagaaaag
cacctgcgggagaaggccctgaggtccatgaggaaggcgcaggtgtcccccccctcctag
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