Hirundo rustica (Barn swallow): 120764729
Help
Entry
120764729 CDS
T09369
Name
(RefSeq) E3 ubiquitin-protein ligase TRIM39-like
Organism
hrt
Hirundo rustica (Barn swallow)
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SPRY
zf-C3HC4_4
zf-B_box
zf-C3HC4
zf-RING_UBOX
zf-C3HC4_2
PRY
zf-C3HC4_3
zf-RING_2
U-box
zf-RING_5
Fib_alpha
AAA_13
SKA2
Baculo_PEP_C
zf-RING_6
MPS2
zf-Nse
BLOC1_2
Motif
Other DBs
NCBI-GeneID:
120764729
NCBI-ProteinID:
XP_039944687
LinkDB
All DBs
Position
36:316510..320141
Genome browser
AA seq
542 aa
AA seq
DB search
MDALPGEASCPICLEFFRDPVSIHCGHHFCRPCIERCWEWPTAGFACPRCRDTAPQRSLR
PSRELARVLEIARRLSRGDALGTEEDEEEEGCQRHREPLEVFCKEDGALLCAICRESRSH
RAHTVLPVPEAVREYREQIQAGLQTLKDDRDKLLEFREAEMRRNWEYLEKTEAERQRILS
QFQGLHLSLEELSRRLLARLRDLESDIGKVQEENVTSLTEEISRLDTRVQELEEKCRQPA
RTFLQDINGTLSSLGKENLQLPPSPLPELEKKTNHFREEYSLLEETLRSFQDILLFELPE
KMTVTLDPSTAHPQLLVAPDGSSVSWESARDPPGDGAGTESSPDGTGPGTDPPGDGAGAG
TEPPLDGAGPGTEPPLDGAGTEPTLDGSSTDPPGDGPGTDPPGDGPGPGTDPSVLGRQGI
RAGRRCWDVQVAPEGSWALGVARETPGSGAETPGSAEWELWSMGLCQGQFWALTSLERIP
LFPVRAPGRVRVALDYERGQVAFFDADRRSLIFAFPAASFKGQSVHPWFLVWGEGSRITL
CP
NT seq
1629 nt
NT seq
+upstream
nt +downstream
nt
atggacgcgctcccgggcgaggcctcctgccccatctgcctggaatttttccgggacccc
gtgtccatccactgcggccaccacttctgccgcccgtgcatcgagcgctgctgggagtgg
cccacggccgggttcgcgtgcccgcggtgccgggacacggccccgcagcgcagcctccgc
cccagccgggagctggcgcgggtgctggagatcgcccggaggctgagccgcggggacgcg
ctgggaaccgaggaggacgaggaggaggaaggatgccagaggcaccgggagcccctggag
gttttctgcaaggaggacggagctctgctgtgcgcgatctgccgcgagtcccgctcgcac
cgcgcccacaccgtgctcccggtgccggaggcggtccgggaataccgggagcaaatccag
gctgggctgcaaaccctgaaggacgacagagacaaactcctggagttccgggaggctgaa
atgaggagaaactgggagtatttggagaagacggaagccgagcggcagcggattctgtcc
cagttccaggggctgcacctctccctggaggagctctcccgtcgactcctggctcggctg
cgggacctggagagcgacatcgggaaggtgcaggaggagaacgtgacgagcctgacggag
gagatctcccggctggacacccgcgtccaggagctggaggagaagtgccggcaaccggcc
aggaccttcctgcaggacatcaacggcaccttgagcagcctcggaaaggaaaacctccag
ctgcccccatcgcctctcccagagctggaaaagaaaactaatcacttcagggaggaatat
agtctcctggaggagacgctgaggagcttccaagacatcctgctgtttgagctgcccgag
aaaatgacggtgacgctggaccccagcacggcccatccccagctcctcgtggcacccgac
gggagcagcgtcagctgggaaagcgcccgggaccctcccggggacggagccggcaccgaa
tcctccccggatggaaccggacccggcaccgaccctcccggggatggagctggagctggc
accgagccccccctggatggagccggacccggtaccgagccccccctggatggagccggc
accgagcccaccctggacggatccagtaccgaccctcctggggatggaccgggcaccgac
cctcctggggatggacccgggcccggcaccgacccctccgtgctgggccgccagggcatc
agggccgggaggcgctgctgggatgtgcaggtggcccctgagggctcctgggccctgggg
gtggccagggagacccccgggagcggggcagagacccccgggagcgccgagtgggagctg
tggtccatggggctctgccagggccagttctgggctctcacctcgctggagcgcatcccg
ctgttccccgtccgggcgcccggcagggtgcgggtggccctggactacgagaggggccag
gtggcttttttcgatgctgatcggaggagcctgatcttcgccttcccggcggcctccttc
aaggggcagagcgtccacccctggttcctggtgtggggcgagggctcccggatcacgctg
tgcccctga
DBGET
integrated database retrieval system
