Hirundo rustica (Barn swallow): 120765044
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Entry
120765044 CDS
T09369
Symbol
RNF20
Name
(RefSeq) E3 ubiquitin-protein ligase BRE1A
KO
K10696
E3 ubiquitin-protein ligase BRE1 [EC:
2.3.2.27
]
Organism
hrt
Hirundo rustica (Barn swallow)
Brite
KEGG Orthology (KO) [BR:
hrt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
hrt04121
]
120765044 (RNF20)
Enzymes [BR:
hrt01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
120765044 (RNF20)
Ubiquitin system [BR:
hrt04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
BRE1 proteins
120765044 (RNF20)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C3HC4
zf-C3HC4_3
HrpB7
zf-C3HC4_2
zf-RING_5
zf-RING_2
BRE1
zf-RING_UBOX
zf-rbx1
Motif
Other DBs
NCBI-GeneID:
120765044
NCBI-ProteinID:
XP_039945190
LinkDB
All DBs
Position
Z:75905071..75921776
Genome browser
AA seq
982 aa
AA seq
DB search
MSGIGNKRMAGEPGTSAPPEKKAGVEDLGTTVETIKLGGVSSTEELDIRTLQTKNRKLAE
MLDQRQAIEDELREHIEKLERRQATDDASLLIINRYWNQFDENIRIILKRFDLDQGLGDL
LTERKALVVPEPEPDSDSNQERKDERERVEGLEPAFSFLATLASSTSEEIESQLQERVES
SRRAVAQIVTTYDKLQEKVDVLSQKLNSGDISLMEEAVVELNSYLSHENGRLQELADVLQ
EKHRVMSQEFSKLQERVETAESRVSVLETMIDDLQWDIDKIRKREQRLNRHLADVLERVN
SKGYKVYGAGSSLYGGTITINARKFEEMNAELEENKELAGNRLNELEELRQDLEEVTTQS
EKLKVELRRAVEEAVKETPEYRCMQSQFSVLYNESLQLKAHLDEARTLLHGTRATHQRQV
ELIERDEVSLHKKLRTEVIQLEDTLAQVRKEYEMLRIEFEQTLAANEQAGPINREMRHLI
SSLQNHNHQLKGEVLRYKRKLREAQSDLSKICSHSGSALLQSQSSAEDTKEEPAKIKQEP
DDPSAQVCAPKAAFEDAHEMKARRDEEERERERQEREREREKEKEREREKEKEKEKERER
EKQKQKELEKERESKEKEKGKHEDGRKKEAEVIKQLKAELKKAQESQKEMKLLLDMYRSA
PKEQRDKVQLMAAEKKAKAELEELRQRVKELEDKEKKESKKMADEDALRKIRAVEEQIEY
LQKKLAMAKQEEEALLSEMDVTGQAFEDMQEQNIRLMQQLREKDDANFKLMSERIKSNQI
HKLLKEEKEELADQVLTLKTQVDAQLQVVRKLEEKEHLLQSSIGTGEKELGLRTQALEMN
KRKAIDAAQLADDLKAQLELAQKKLHDFQEEIVENRVTREKEMFNFKRAEEDISRLRRKL
ETTKKPDMVPNCDEILMEEIKDYKARLTCPCCNMRKKDAVLTKCFHVFCFECVKTRYDTR
QRKCPKCNAAFGANDFHRIYIG
NT seq
2949 nt
NT seq
+upstream
nt +downstream
nt
atgtctggaattggcaataaacgaatggctggagagcctggcacttctgcacctccggag
aagaaggcaggggttgaagatttgggcaccactgtggagaccattaaacttggtggtgtt
tcttcaacggaggagctggacatccggacgctgcagaccaagaaccgtaagcttgcggag
atgctcgaccagcgccaggccatcgaagatgagctgcgggagcacattgagaagctggag
cgtcggcaggccactgacgatgcctctctgctgatcatcaaccgatactggaatcagttt
gatgaaaatatccgcatcatccttaaacgctttgacctcgatcaaggacttggagacctt
ttgactgaaagaaaagcactggtggtgccagaacctgaaccagactctgacagtaatcag
gaacgcaaagatgagagggaacgagtggaaggactggagccagcattctccttcctggcc
actctagccagcagtaccagtgaggagatagaatctcagctgcaggagcgtgtggagtcc
tcccgccgggctgttgcccagattgtgacaacatatgacaagctgcaggagaaggtggat
gtgctgtctcagaagctgaatagtggagatatttcactgatggaagaagcagtagtggag
ctgaattcctacctgtcacatgagaatggacggctgcaggaactggctgatgttcttcag
gagaagcacagagtcatgtctcaggagttctccaagctgcaagagagggtggagacagca
gaatcccgggtgtctgtcctggagaccatgattgatgaccttcagtgggacattgacaag
atccgcaagagggagcagagactcaaccgccacctggccgatgtcctggagcgagtaaat
tccaaaggctacaaggtgtatggagctgggagcagcctctatgggggaacaatcaccatt
aatgcccgcaagtttgaggagatgaatgcagagctggaagagaataaagagcttgctggg
aatcgccttaatgaattggaagaactacgtcaggatcttgaggaagtaacaacacagagt
gaaaagctcaaggttgagctgcgacgggcagtggaagaggctgtgaaggagaccccggaa
tatcgctgcatgcagtcccagttttctgttttgtataatgagagtctccagctgaaggca
caccttgacgaggcccgcacactgctccatggcacccgcgccacgcaccagcgccaggtg
gagctgatcgagagggatgaggtcagccttcacaagaagctacgcactgaggtgattcag
ctagaggacaccctggcacaagtccgcaaagaatatgagatgttgaggatagagtttgag
cagacacttgctgccaatgagcaagcaggcccaattaatcgggagatgcgtcacctcatc
agcagcctccagaatcacaaccaccagctgaagggagaggtgttgagatacaagcgcaaa
ctgagagaggcccagtctgacctgagcaagatctgctctcacagtggcagtgctctcctc
cagtcccagtccagcgctgaagacacaaaggaggaacctgcaaagatcaagcaggagcct
gatgatccttctgcccaagtgtgtgctcccaaggctgcttttgaagatgctcatgaaatg
aaggccaggcgagatgaagaggaacgcgagcgggagagacaagaaagggagagggaacgg
gagaaggagaaagagagagaacgagaaaaagagaaagagaaggaaaaggaacgagagcgg
gaaaagcagaagcagaaggaattggagaaggagagagagtccaaagagaaggagaaaggg
aagcatgaagatggaagaaaaaaggaggctgaagtgatcaagcagctgaaggctgagctc
aagaaggcccaggagagccagaaggagatgaaactgttgctagatatgtaccgctctgcc
cccaaagagcagagagacaaggtgcagctgatggcagctgagaaaaaggcaaaagctgag
ctcgaggaactgaggcagagggtgaaagaattggaagacaaggaaaaaaaggaaagtaaa
aagatggctgatgaggatgccctccgcaagatccgcgcagtggaggaacagattgaatat
ttacagaagaaacttgctatggctaagcaggaagaagaggccctgctgtcagaaatggat
gtcacaggccaagcctttgaggacatgcaagagcagaacatccgcctgatgcagcagctg
cgggagaaggatgatgccaacttcaagctgatgtcagaacgtatcaagtccaaccagatc
cataagctgctgaaagaggaaaaggaagagctggcagaccaagttttgacactgaaaacg
caggtggatgcccagctgcaggttgtacgtaagctagaggagaaggaacacttactgcag
agcagtattggaacaggagagaaggagttgggtctgcgaacacaggccctggaaatgaat
aaacgcaaggccattgatgcagcgcagcttgcagatgatctgaaggcccagctagagctc
gctcagaagaagttacatgattttcaggaggagattgtggaaaacagagtaactagagaa
aaagagatgttcaacttcaaaagggctgaggaagatatttctaggttgcgcaggaagctg
gagaccacaaagaagcctgacatggttcccaactgtgatgagatcctgatggaggaaatc
aaggattataaggcccgcctgacgtgcccgtgctgcaacatgcgcaagaaggacgcggtg
ctcaccaagtgcttccatgtcttctgctttgagtgcgtgaagacgcgctacgacacccgg
cagcgcaagtgccccaagtgcaacgcggcctttggggccaacgacttccacaggatctac
attggctga
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