Hirundo rustica (Barn swallow): 120765193
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Entry
120765193 CDS
T09369
Symbol
PDZD2
Name
(RefSeq) PDZ domain-containing protein 2 isoform X1
KO
K24058
PDZ domain-containing protein 2
Organism
hrt
Hirundo rustica (Barn swallow)
Brite
KEGG Orthology (KO) [BR:
hrt00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
hrt04990
]
120765193 (PDZD2)
Domain-containing proteins not elsewhere classified [BR:
hrt04990
]
PDZ domain-containing proteins
Other PDZ domain-containing proteins
120765193 (PDZD2)
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
PDZ
PDZ_6
PDZ_2
Motif
Other DBs
NCBI-GeneID:
120765193
NCBI-ProteinID:
XP_039945699
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All DBs
Position
Z:20078301..20283117
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AA seq
2674 aa
AA seq
DB search
MPITQDNAGVFLPLLCQWLQNSRREGAEGAEQQLCRSAVQKLSEYIQLNFSVDESNLQPG
SCVASDTEICTMYLAQEMRKNEVLGLSFGNIPALGDYGEKRRGGKKRKAHKGPVLDVGCI
WVTDLKKNSPAGKCGRVRLKDEILSLNGQLMVGVDVTGASYLAEQCWNGGFVYLIMLRRI
KRKAPLPPSNGNNSNSCDPKAKPSPEPGDRAAQNGKRTRKFGVITRTPGSKDSKEKLGSE
HGNGHCTPMEVEVAQPETSEAESNGEEQHQDTGALYRGRLSDAGMPDIGDQAAQREGCHI
WKMHILKGTDGLGIQITGGRGSKRSPHSIIVTHVEEGGSAHRDGRLMAGDELLMINGQSL
VGLSHQDAVALLRSAAGLVQLVVSTKESSEGDLLKYPCTSLPDLLSTCSVQDSVSCTDNK
ENEEPEEEDGKGVNVSPEKLVAVMETEKSQDPACGEVSKGNNQSSTLASGILKYRSRSQG
AGSRLESVGEDDELTVENGESNYEIAVKYSRGGRKHSLPQQLESAGARQDYHIVKKSTRS
FSAAQVESPWRLTQPSIISNIVLMKGQGKGLGFSIVGGQDSARGRMGIFVKTIFPNGAAA
ADGRLKEGDEILEVNGESLQGLTHQEAIQRFKQLKKGVVTLTVRTRLRSPSLTPCVTPTL
LSRSSSPSASVPVPGLEEPDGSSSSRKGPGPKDRIVMDVTLNKEPGVGLGIGACCLTLEN
SSPGIYIHSLAPGSVAKMDGRLSRGDQILEADSVSLRHAALSEAYAILSECGPGPVSLII
SRHPNPKVSEQEMDEAIARTTHRESKDASSSHVTGAVQKSPSPSVKAKQGETSSPLSWTM
KRFLEPANRQGSVSSEAELSQYFSHDGTSHLPFSDAAPGLCDEEQLRQKNRNSWLDDGAL
LPGSLTSRDAGVTKANGLASPATGRSSGHHNKHTESVRPGILSDSPKSARSPFHRQRRVV
FYDGDASDDDESSHLHRSQRAKSQEDAGIVITTSSVEIDDESQDSESLRYSGMETSSPVF
SNSVESADSTLEQIESPFFPIIAFDYSSVPEVRLGSLSLRELREAQLESKRSPKLEHRAV
TRVKSMMSTECRSLQRHRTEEHGSYNKPVARMLPHSKKCEAPDAVGQGQVEIVTLVRNEH
ESFGLDLEIQAMPLKVVVTGMRPGGPAEMGSMGKMAVGDEITTINSIPVSKMMYEEICLL
MQCLPTSVTLEIQKAASAVSRFTNLILSPGVDTQNQANVNSFLTTEEEQSSGKQEKAGLQ
AAVGDCMVERATLPPDAVSRDVHRGPPKGSREEDCVAIPVTDIDDLLSQMGAPESRASRT
PSRAESPLRDEYTTMCCCGTDEGCPESEPRAPKQELLEKTVNCGANAQGVLGLSVLDSIN
TGKLFTVNKNSLNNYSRNFSSLNEDELPAANSVESKKSDPFPKSMYGAAEDSHSDAESLT
EAFDSASEVLLGQCAAANAPAGCTVTESDEEQIEICCMNDELQQPAQGQHLTSGTSSSSL
SQLHPYSGKVLENEGCAMCGSLETSINKLGLEDSGGLTPCPSQCPNVSSASLCSPSSVLL
PEEDILKNSVSIPEVYSFCNNGALRTEEQMDLGNSNENKKCCESIEEKGSLHCKKPSFCS
ARNVNVLENSLLEKEGCNDEQRAKSESEMAADDCNHAANYCLLKKETNSLSTLSKTDSSH
VNALSTRGISLRSPFPTRSKDPKANVTHELPGKNEKTNSVTSGRTSNGKVQSSGTNHCKG
AAVPHSPSSQKKSCQESKAMAQKSIMDTLLNNQKSKTGPKLKGFTIKSKAKTNSDSSGIT
PTKVNGADQKRASVSPQLSPKLLGKKTPLSRNSPTNSDPGKSISAASKTLKSELENKPSL
VISEDSLLPLLNGNSSPTTSSEMKCGCGELSWGKPKEKQVSMQAVVYQHKDAKVDDFRAR
DSQSIVTSPPQGIPKAEYVKGRTDNPGRDLNTNKNVCSADNLRQLDLQNVGMSTGACSSS
FGSPSVQQEQLEGQEIQRTFIEVKLSSSSSPSSSSSASSSPASFLRLPLLEKTEEANAEV
PQPTEEMGTMQFFSRGDTAGDRRLCGLSKSVTRTYSMPSQLSGHLREDCHVAEVHPVQGP
QGQTAEEKYPQAAMGMVHLHLTNNQSGKEQVYPSKSAQKVHDTSPSASDISYPTADKLRS
FRRNYYYYELNWPHEPISSFSVKQRIKSFENLANFDRPIVKAIDICSTARLPLARRSCGG
LATTSSSAEVPWALQRSLSSYGGSPSPANAMAKSPHGKEPMCVTQGGKGDGKPQRSEEGG
VGADVAAFPMSASQVRRSRGLGRLPLSRSRLRELRALSMPDLDKLCGDSFSEPPQPTCFK
TELEITPRRALGMPAQSRAAPPARCSPTELGAMGLGACSPRNSSSGTPGSASDDDMPHGS
SLDGENSWSISLDQLLISSLDQQKLQSVLSVVVPKCEVAAMLQEVKAQIKSKEDTYFVVL
HKEEGAGLGFSVAGGIDLEQKSVTVHRVFSKGVASQEGTIRRGDLVLSINGKSLASSVHG
DVLNTLHHARLYKYAVIVIQKEKDKTNNSSRLEISAAGRKCMGSGKDVSMEIGTDPNLDM
NDVICIELLKTSAGLGFSLDGGKASIAGDKPLLVKRIFKGGAAEQSGNIETGDEILAVSG
KSLIGLMHYDAWNIIKSVPEGPVQLLIRKHRTAV
NT seq
8025 nt
NT seq
+upstream
nt +downstream
nt
atgcccatcacacaggacaacgccggggtcttcctccccctcctgtgccagtggctgcag
aacagccggcgggagggtgccgagggagccgagcagcagctctgccgctcggccgtccag
aagctgagcgagtacatccagctcaacttctccgtggacgagagcaatctgcagccaggc
agctgtgtggcttcggatacggagatctgcaccatgtacctggcccaagagatgaggaaa
aatgaggtcctgggcctgagctttgggaatatccctgctctgggggactatggggagaag
cgtcggggaggaaagaagaggaaggcgcataaggggcccgtgctcgatgtcgggtgcatc
tgggtgacggacttgaagaagaacagcccggccgggaagtgcgggagagtgcgcctgaaa
gacgagatcctttctctgaatggacagctaatggtcggtgtggatgtcaccggagcaagt
tacctggccgagcagtgttggaatggcggcttcgtctacctgatcatgttgcgccgcatc
aagcgcaaagcccctctgcctccctccaacggcaacaacagcaacagctgcgaccccaaa
gccaagcccagccccgagcctggagacagagcagctcaaaatgggaaaaggaccaggaag
ttcggggtcatcaccaggacaccgggcagcaaggacagcaaggagaagctgggctcggag
cacgggaatgggcactgcaccccgatggaggtggaggttgctcagccagagacctctgaa
gcagagagcaatggggaagagcagcaccaggacaccggggcactgtatcggggacggctg
tcagatgctggcatgccagacattggggaccaggctgcccagcgagaaggttgccacata
tggaagatgcacatcctgaaagggacagacgggctgggaatccagataacaggaggcaga
gggtcgaagcggtctcctcacagcattatcgtcacccacgtggaggagggcggctctgca
cacagggatggcaggctgatggccggtgacgagctccttatgatcaacgggcagtcgctg
gtggggctctcccaccaggacgccgtggccctcctccgctcggccgctggcctggtgcag
ctggtggtctctaccaaggaatcttctgaaggggatcttctgaagtatccatgtaccagt
ttaccagacttgcttagcacttgctcagtccaagactctgtctcttgcactgacaataag
gaaaatgaagagccggaggaagaagatgggaaaggagtgaatgtgtctcctgaaaaactg
gttgctgtgatggaaacagagaagtctcaagatccagcttgtggagaagtgtccaaagga
aacaatcagagttcaactctagcaagtggcatactgaaatacagaagtcgatctcaaggt
gctggatctcgcttggagtctgtgggagaagacgatgagctgacagtggaaaatggtgaa
tcaaattacgaaatagcggtgaaatattcccggggtggaagaaagcactctctgccacag
cagctggagtcagcaggagccagacaggactaccatattgtgaagaaatctacccgttcc
ttcagtgctgcccaagtggaatctccatggagactgacccagccatccatcatttccaac
attgtcctgatgaaagggcaaggcaagggtcttggattcagcattgtgggaggtcaggat
tctgctcgtggacgcatggggatttttgtgaagacgatattcccaaatggagcagcagct
gctgatggaaggcttaaagaaggggatgaaatcctggaagttaatggagagtctctacaa
ggactgacccatcaggaggccatccagaggttcaagcaactcaagaagggcgtggtgacg
ctgacggtgcgcacacggctgcgcagccccagcctcacgccctgcgtcacccccaccctg
ctgagccgctccagctcccccagtgccagcgtgcctgtccctggccttgaggagcccgat
ggctcctcctccagccgcaaaggacctggccccaaggacaggatcgtcatggatgtgaca
ctcaataaagagccaggggttgggctcggcattggtgcctgttgtctcacactggaaaac
agctctcctgggatttacattcacagcttggccccaggatcagtggctaaaatggatggc
agattaagccggggtgaccagattctggaggcggattctgtgagcctgcgtcacgcagca
ttaagcgaagcctatgcaatcctgagtgagtgtggacccggcccggtcagcctaatcatt
agtcgtcatcctaacccaaaggtttcagagcaggagatggatgaagcaattgcacgtact
acccaccgagagagcaaggatgccagctcctctcacgtcacaggagctgtgcaaaaaagt
ccatctcctagtgtgaaggccaaacaaggagagacctcatctcccctcagctggactatg
aaacgcttcttggagccagcaaaccggcagggatctgtcagctctgaggcagagctttcc
cagtacttctcccatgatggtacgagccatctccccttctctgatgctgcacctggcttg
tgtgatgaagagcagctccgtcagaagaacaggaacagttggctggacgatggcgctctt
ctccctggcagcctgacttctagagatgcaggagtgacaaaagcaaatggtttggcttct
ccagctactgggagatcgtctggccatcacaacaagcacacggagtctgtccggcccggc
attctcagtgacagtcccaaatctgcccgcagcccctttcaccgacagaggagggttgtt
ttctatgatggtgacgccagtgatgatgatgaaagctcccacttgcacagaagccagagg
gccaagagccaggaggatgccggcattgtcattacaacctcgtctgtagaaatcgatgat
gagagccaggacagtgagtcattgagatacagtggcatggagacatcttcccctgtcttc
agcaactctgtggagtctgcagatagcacgctggagcaaattgaatctccttttttcccc
atcatagcgtttgattactcaagtgtgcctgaagttcgtcttggcagcctgagtttgagg
gagctccgggaagcacaacttgaatccaagagatcgccaaaacttgagcacagagcagtc
accagagtgaaaagtatgatgagcactgagtgccgaagccttcagagacacaggacggag
gagcacggctcttacaacaagcctgttgccaggatgctccctcacagcaagaagtgtgaa
gcacctgatgcagttggccagggtcaggttgaaattgtcactctggttcgcaatgagcac
gagtcatttggcctggatttggaaatccaagccatgcccttaaaggttgttgtcacaggg
atgcggccaggtggaccagcagaaatgggatcaatgggcaagatggctgtaggagacgag
attaccaccatcaacagcatccctgtcagcaagatgatgtatgaggaaatctgcttgctt
atgcagtgtcttcccacatccgtaaccctggagatccagaaggcagcatcagctgtcagc
agatttacaaacctcatcctgtctccaggggtagacactcaaaatcaggccaatgtcaac
agcttcctcacaacggaggaagaacagagttctgggaagcaagaaaaagcaggtctgcaa
gctgctgtcggcgactgcatggtggagagagcaacactgccgcctgatgccgtgagcagg
gacgtgcacaggggtcccccgaagggcagccgtgaggaggactgcgtggccatccctgtc
actgacatcgatgacctgctcagccagatgggtgcccctgagagcagggcctcgcgcacc
ccatcacgcgcagaaagtcccctccgagacgagtacaccacgatgtgctgctgtggcact
gatgaaggctgccctgagtctgagccacgagcacccaagcaggagctgctggagaaaact
gtgaattgtggagctaatgcacaaggggttttgggactgtctgtgttggattccatcaac
acaggcaaactttttactgtgaataaaaactctttaaataactattctaggaattttagc
agtttaaatgaggatgagttgcctgcagcaaactctgtggaaagtaagaaaagtgaccca
tttccaaagtcaatgtatggggctgctgaggattcccactcggacgcagagtccctcaca
gaagcctttgacagtgctagtgaggtgttgcttgggcaatgtgctgctgctaatgcccct
gcaggctgtactgtaacagagtcagatgaggagcaaattgagatttgttgcatgaacgac
gagctgcagcagcctgcacaggggcagcatctcacctctggaacaagttcatcctcattg
tcccagctgcacccttacagtggcaaagttttggagaatgagggctgtgcaatgtgtggg
tcactggagacaagcatcaacaaactaggtttggaagatagtggtggactcactccatgt
ccttcacagtgtccaaatgtgtcctctgcatccttgtgttctccctcctcagttcttctg
ccagaagaagacatcctaaagaattcagtcagtatccctgaagtttactctttctgtaac
aatggtgccttacgtacagaagaacagatggatttggggaacagtaatgaaaataagaaa
tgttgtgaatccattgaagaaaaagggtctctgcactgcaaaaaaccaagcttttgctct
gctagaaatgtcaatgtcttggagaacagcttgcttgagaaagaaggatgtaatgatgag
cagagagccaaatctgaaagtgaaatggcagctgatgactgtaatcatgctgctaattat
tgcttgctgaagaaagaaaccaacagtttgtccaccttgtctaaaacagacagcagtcat
gtgaatgcattgtcaacaagaggaatatcactcaggtcaccctttcccactagatctaaa
gatccaaaggctaatgtgactcatgaattgccaggaaaaaatgagaaaactaactctgtg
acttcaggaaggacttcaaatggaaaagtccaaagctcaggcacaaatcactgcaaagga
gctgcagtaccgcacagcccatcctcacagaaaaaatcctgtcaggagtctaaggcaatg
gcacaaaaaagtataatggacacccttttaaataatcagaaatctaaaactggaccaaag
ctaaaagggttcaccatcaaaagcaaagcaaagacaaattcagattcttctggcattact
cctaccaaagtcaatggggctgatcagaaaagggcttctgtttctcctcaactgtccccc
aaactcctgggaaagaaaacaccattgtcccgtaactcacctacaaactcagatcctgga
aaaagcatttcagcagcctcaaagactctgaaatcagagctagaaaataaaccatctctg
gtaatttctgaagattcgcttctgcctctcctaaatggcaacagcagtccaactacaagt
agtgaaatgaaatgtggctgtggggagctgtcatggggaaagccaaaagagaagcaagtt
tccatgcaggctgtggtgtatcagcataaggatgctaaggtggatgatttcagagccaga
gacagtcagtccatagtcacttcacctcctcaggggataccaaaagctgaatatgtgaaa
gggaggactgataaccctggaagagatctgaacacgaacaaaaatgtctgtagtgcagat
aaccttaggcaattagatctgcaaaatgtaggaatgtctactggagcctgctcttcttca
tttgggtccccctcagttcagcaggagcagctggaagggcaggagatccaacgtactttc
atcgaggtgaaactttcttcctcatcatccccttcgtcctcctcttctgcctcgtcctca
ccagcatcatttttgcggctgccattgctggagaaaacagaagaggcgaatgcagaagtg
cctcagccgactgaggagatggggaccatgcagtttttctctagaggagatactgctgga
gacagacgtctgtgtggcttgtcaaaatctgtgacgaggacctactcaatgccatcccag
ttatcaggtcacctgagggaggactgccatgttgcagaggttcaccctgtgcaaggaccc
cagggccaaactgcagaggagaaatacccacaggcggccatggggatggttcatttgcat
ctgactaacaaccagagtggaaaggagcaggtgtacccctctaaaagtgcccagaaggtc
catgatacgtccccctcagccagtgacatcagctaccccactgctgataaactgagaagc
ttcaggcggaattactattactatgagctgaactggccacatgagccaatttcatccttc
tctgtcaaacagaggatcaaatcctttgaaaacctggcaaattttgaccggcccattgtg
aaggccattgatatatgctcgactgcaaggttgccccttgccaggaggtcatgtggcggg
ttggccaccacatccagctctgctgaggtgccatgggcactgcagcgcagcttgagctcc
tatggtggcagccccagcccagccaacgccatggccaagtctccccatggcaaagagccc
atgtgtgtgacccagggtggcaaaggggacggaaagccccagaggagtgaggagggtggc
gttggggcagacgtggccgccttccccatgtcggcctcacaggtgcgccgcagccggggc
ctggggcggctgccgctgtcccgctccaggctgcgggagctgagggccctcagtatgccc
gatctggacaagctgtgtggagacagcttctcagagcccccgcagcccacctgcttcaag
acagagctggaaatcacgccccgcagagcccttgggatgcctgcccagagcagggcagct
cccccagcccgctgcagccccacggagctgggtgcgatgggactgggagcctgcagcccc
cggaacagcagctcagggacaccgggatctgcctcggatgatgacatgccccatggcagc
tctctggatggggaaaacagctggtctatcagcttggatcagctgctcatctcaagcctg
gaccagcaaaaactacaatctgttttgtcagtggtagtaccaaaatgtgaggttgctgct
atgctccaagaagtcaaagcacaaataaagagcaaagaagacacatactttgtagtcttg
cacaaagaagaaggagctggcctgggatttagtgttgctggaggaatagacttggaacag
aaatcagtcacagttcacagagtattttcaaagggagtggcatctcaagaagggactatc
cgtcgaggagatcttgttctgtcaatcaatggcaaatctctggcaagctctgtccatggg
gatgtcctgaatactcttcatcacgcaaggctgtacaaatatgcagtcattgtcatccag
aaggaaaaagacaaaacaaacaattcttccagactcgagatatcagctgctggcagaaaa
tgcatggggtctggaaaggatgtttccatggaaataggaacagatccaaacctggacatg
aatgatgtcatctgcattgaattattgaaaacctctgctggtttgggattcagtctggat
ggtggaaaagcttccattgctggagataagcccttgcttgtaaaaagaatatttaaaggt
ggtgctgcagaacaatctggaaacatagaaactggagatgaaattcttgctgttagtggg
aagtcattaattgggctcatgcattacgatgcctggaacatcattaaatccgtgccagag
gggcctgttcagttgctaatcagaaaacacagaactgcagtatga
DBGET
integrated database retrieval system
