Halovivax ruber: Halru_1142
Help
Entry
Halru_1142 CDS
T02402
Name
(GenBank) PAS domain S-box
Organism
hru
Halovivax ruber
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GAF_2
PAS_4
PAS_9
PAS
GAF_3
GAF
PAS_10
HATPase_c
PAS_8
PAS_7
Synaptobrevin
Motif
Other DBs
NCBI-ProteinID:
AGB15759
UniProt:
L0IAJ6
LinkDB
All DBs
Position
complement(1180392..1182260)
Genome browser
AA seq
622 aa
AA seq
DB search
MGDRTGPILDRVTDLFFAVDSDWCLTYLNRSTEWLFEGSRDELVGRVCWDVFPQSIDESV
AETLYEARQTESRAVSEWYHDGSDVWFETRAYPTPDGLSVYMIDVTARKRRTNELAQKAA
AVEAMDDGVVLLDENYRAVSVNDAVTNTLDVDTDVIVDNHLERLTDLASIPDDHVVRIGR
AIDEVSTGIAGRRTLEIPYRSGAGLDRRCEVRIATVDTAAASLALVFRDVTDQHDYEQLV
HSLHELTRWLLEATDPEEICAIAVHAGSDLLDLPISGVWLLDDEQGYLDPIAGTAGAHEQ
FGGLPTFYPGEGLVWDIFESGEPALFDDLQQVSGLYNPDTPLESEIIAPIGTHGVLMTGS
LEANRFDETDLQLLSTLTENTSAALDRSDRERTLRDRTERLERQSERLEAVATVLSEDLK
EQLTAVGDALDSGGATQSDWEFPFAEDDVAVTLDRTERLVDDIREYARNTTSVGRRAPVD
LESAIEDAVEQSRLESAAIVIDDGATLRADPDRFRYLLETVFDDAAARSSGDVTIQIGTV
GVETRTDGPRGFYILDDASKNPPTATDGLPDFSIDGDETSDGLGLAVAQAIAEAHDWSVS
IGVGENGGTRFEVRDVTTLDPA
NT seq
1869 nt
NT seq
+upstream
nt +downstream
nt
gtgggtgaccgaaccggcccgatcctggatcgagtaacggacctcttcttcgccgtcgac
agcgactggtgtctgacctatctcaaccgatcgaccgagtggctgttcgagggatcgcgg
gacgaactcgtcggcagagtgtgctgggacgtcttcccccagtcgatcgacgagtccgtc
gctgaaacgctgtacgaagcccgacagacggagagtcgggccgtctccgagtggtaccac
gacgggagcgacgtctggttcgagacacgcgcgtaccccacgccggatgggctctcggtt
tacatgatcgacgtgaccgcgaggaagcgtcgaacgaacgagctcgcccagaaggccgcc
gccgtcgaggcgatggacgacggcgtcgtcctgctcgacgagaactaccgtgctgtctcc
gtcaacgacgcggtgacgaacacgctcgacgtcgacaccgacgtcatcgtcgacaaccat
ctcgaacgactaaccgacctggcgtcgattcccgacgaccacgtcgtccgcatcggacgc
gcgatagacgaagtttcgaccggcattgccggccggcgaacgctcgagatcccgtatcga
tcgggagccggtctcgatcgccgctgtgaggtcaggatcgcgaccgtcgacacggcagct
gcgagcctcgcgctcgtctttcgcgacgtcacggatcagcacgactacgaacaactcgtc
cactcgctgcacgagctcacccggtggctgttagaggcgaccgatccggaagagatctgt
gcgatcgccgttcacgcggggagcgacctgctcgacttgccgatcagcggcgtctggttg
ctcgacgacgagcaggggtatctggatccgatcgcgggcacggctggtgcgcacgagcag
ttcggcgggttgccgacgttctaccccggcgagggactcgtctgggacatcttcgaatcg
ggtgaaccggccctcttcgacgatctacaacaggtatcgggactctacaacccggacacg
ccgctcgaaagcgagattatcgcaccgatcgggacccacggcgtgttgatgacgggctcg
ctcgaagcgaatcgattcgacgaaaccgacctccagttgctctcgacgctcaccgagaac
acgagcgcggccctcgaccgatccgatcgcgaacggacgctccgcgaccgaaccgagcgc
ctcgagcgacagtccgaacggctcgaagccgtcgccacggtgctctcggaggacctgaag
gagcaactcacggccgtaggcgacgcactggactcgggcggggccacccagtcggactgg
gagtttcccttcgccgaggacgacgtcgccgtcaccctcgatcggaccgagcgcctcgtc
gacgacatccgcgagtacgcccgaaacacgacgtccgtgggccggcgcgccccggtcgac
ctggaatcggcgatcgaggacgccgtcgagcagtcacgactcgagagtgcggcgatcgtc
atcgacgacggtgcgacgctccgtgcggatccggaccggttcaggtacctgctagaaacg
gtgttcgacgacgccgccgcccggtcgagcggggacgtcacgatacagatcggcacggtc
ggcgtcgagacgcgaaccgacgggccccgcggattctacattctcgacgacgcctcgaag
aacccaccgacggccaccgacggactcccggacttctcgatcgacggcgacgagaccagc
gacggactcggactggcggtcgcacaggccatcgccgaggcccacgactggtcggtctcg
atcggcgttggggagaacggcggcacccggttcgaggtccgcgacgtgacgacgctcgat
ccggcctag
DBGET
integrated database retrieval system
