Herbinix luporum: SD1D_0365
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Entry
SD1D_0365 CDS
T04072
Name
(GenBank) hypothetical protein
KO
K02396
flagellar hook-associated protein 1
Organism
hsd
Herbinix luporum
Pathway
hsd02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
hsd00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
SD1D_0365
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
hsd02035
]
SD1D_0365
Bacterial motility proteins [BR:
hsd02035
]
Flagellar system
Flagellar assembly proteins
Rod and hook
SD1D_0365
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Flg_bb_rod
Flg_bbr_C
DNA_pol_B_exo1
Motif
Other DBs
NCBI-ProteinID:
CUH91918
UniProt:
A0A0K8J3M2
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All DBs
Position
I:365562..367292
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AA seq
576 aa
AA seq
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MASFGSLYVGVSGLNVSQAALNVTSHNLANIDTKGYVRQQPVITDFQYVKKGDSHLSSMQ
LGLGANFAEIKQVRDMFLDQAYRQEIGRQAFYESQYQAISEIEGLFGELEGVQFQNTMNE
FWEAMQELSREPDNIVARASFVQTAVSFIERADNIYGQLSDYQINLNTQIIDQVNRINEI
GNEIKELNIKIRHYESAGVEKANDLRDQRNLLLDELSKIANITYNEDKDGVVTVNLEGMS
FVSEDLVYRMETVKISEDSDMLKPVWVAHGYVDVFNMDRPPSSMHDTDIGSLKGLLLARG
HKKANYTDIPVRERYETESMYQEAVREYNNKISPSVVMTVQAQFDQLIHGIVTMINDTLS
PNKEVTLADGSKMKILDVEKAPVGMDSDREMGEALFTRKSMARYSDWEEIQIVNEDGEIE
TISARIYIEEDPKDNYSLYTIGEIEVNPRVLQNKSLLPLMKNDKTGAFDIEVAQELLDKW
QKPFATLSPNTLTSNNVNDYYISFISELANRGDQINTISLNQESMVASIDNKRAEVIGVS
SDDELTNLIKYQHSYNAAARYINVVSEMLEHIIMNL
NT seq
1731 nt
NT seq
+upstream
nt +downstream
nt
atggcttcatttggtagtttatatgtgggtgtatcgggcttgaatgtcagtcaagctgct
cttaatgtaacctcacataatttggctaatatcgacactaaaggttatgtcaggcagcag
cctgtaattaccgattttcaatatgtcaaaaagggggattcccacctttcttctatgcag
ctgggcttaggtgccaattttgcagaaattaaacaggtcagggatatgtttttggatcaa
gcctatcgccaggagattggccgacaggctttttatgaatctcagtatcaggcaatttct
gaaattgaaggcttgttcggggaactagaaggggttcaattccagaacactatgaatgag
ttttgggaagctatgcaggagctatcccgggagcctgataatatagtggccagggcttcc
tttgttcaaacggcagtttcatttattgaaagggctgacaatatatacggccagttaagt
gattatcagataaatttaaatacgcaaattattgatcaggttaatagaatcaatgagatt
ggaaatgaaatcaaggaattgaatataaagataagacattacgaaagtgcgggagtagaa
aaagccaacgatttacgagatcaaagaaatttgcttctagatgaactaagtaagattgca
aatattacatataatgaggataaagatggagtggtaacggtaaacctagaggggatgtcc
tttgtttcagaagatttggtttaccggatggaaactgtaaagattagtgaagattctgat
atgcttaagcctgtatgggtagcccatggctacgtggatgtttttaatatggatagaccc
ccctcatctatgcatgataccgatataggttcccttaaaggtctgcttcttgccaggggt
cataagaaggctaattatactgatatacctgtaagagaaagatatgaaacagaaagcatg
tatcaagaagcggtaagggaatataataataaaatcagcccgtcggtggtaatgactgta
caagcacagtttgaccaactaatccatggaatagttacaatgattaatgataccttaagc
cccaataaggaggttaccttagctgacggaagtaagatgaagattttggatgtggagaaa
gccccggtgggaatggactcagacagggagatgggtgaggctttatttaccagaaagagt
atggcccgctacagtgattgggaggaaatacagatagttaatgaagatggtgaaattgag
accatatccgccagaatatacattgaggaagatccaaaagataattattccctatacacc
ataggggaaatagaggtaaatccccgggttcttcagaataaatctcttctgcctctgatg
aaaaacgacaaaacaggagcctttgatatagaagtagcacaggaattgttagataaatgg
cagaaaccttttgccaccttgtcaccaaacacattaacttccaataatgtaaatgactat
tatatttcatttatatcggagttagctaacagaggagatcagattaatactatcagctta
aatcaggaatccatggtggctagtatagataacaagagagcagaagtgataggagtatct
tctgatgatgagcttactaatttgataaaataccagcattcatacaatgctgctgcaaga
tatatcaatgtagtcagtgagatgttagaacacattattatgaatctgtaa
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