Herbinix luporum: SD1D_2039
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Entry
SD1D_2039 CDS
T04072
Name
(GenBank) hypothetical protein
KO
K04771
serine protease Do [EC:
3.4.21.107
]
Organism
hsd
Herbinix luporum
Pathway
hsd01503
Cationic antimicrobial peptide (CAMP) resistance
hsd02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
hsd00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
SD1D_2039
09160 Human Diseases
09175 Drug resistance: antimicrobial
01503 Cationic antimicrobial peptide (CAMP) resistance
SD1D_2039
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
hsd01002
]
SD1D_2039
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
hsd03110
]
SD1D_2039
Enzymes [BR:
hsd01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.21 Serine endopeptidases
3.4.21.107 peptidase Do
SD1D_2039
Peptidases and inhibitors [BR:
hsd01002
]
Serine peptidases
Family S1: chymotrypsin family
SD1D_2039
Chaperones and folding catalysts [BR:
hsd03110
]
Other chaperones and cochaperones
DegP / HtrA
SD1D_2039
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Trypsin_2
PDZ_2
Trypsin
PDZ_6
PDZ
PDZ_1
Peptidase_S46
Myco_arth_vir_N
Motif
Other DBs
NCBI-ProteinID:
CUH93575
UniProt:
A0A0K8J7P8
LinkDB
All DBs
Position
I:complement(2203479..2204921)
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AA seq
480 aa
AA seq
DB search
MDDLNQNNINEISGNSDESYSHNNSSLNSNYDNPDHNHNQETQGYNPPEYSFWAEKVSGD
NGYSYYQHIPQPENKPQKKKKGNKVLTFAAKALLFGILAGVTFAGVQFLYYKINPAAFQN
KESFILGSVDEDSQVGNKLKVSSTDNGTVSTVPESAVMKVAENTMPSIVAITSISTTTDS
WFGYEIPNEGSGSGIIVGKDEKELLIATNNHVVDGTDKITVTFIDETQAEAVIKGTDSKA
DLAVITVDLDKLSKSTLEKIKIAKLGNSDDIKVGEMTIAIGNAMGYGQSLTVGYVSAKDR
KIEVSDNYSYNTMILLQTDAAINPGNSGGALLNIKGEVIGINTVKFADYKVEGMGYAIPI
SRAIPIINELMTREVLKPEEQGFLGVSVTDVTEDVSERFGIPIGVYITTVVENSAAEKAG
LKEGDVIRKVNDIEITSGSQLSELISSIRVGTEIEIEYMRHIGEGYKEETVKATLGKRTE
NT seq
1443 nt
NT seq
+upstream
nt +downstream
nt
atggatgatttaaatcaaaataatataaatgaaatttccggaaattccgatgaaagttat
agccataataattctagtttaaattccaattatgacaaccctgaccataaccataatcaa
gaaacccagggatataatccaccggagtatagtttttgggctgagaaggtatcgggagat
aatggatatagttattatcagcatataccccaaccggaaaataaaccccagaagaaaaag
aaaggaaataaagttttaacctttgcagctaaggctttgctatttggtattttagcagga
gtaacttttgccggtgtccaatttctttattataaaattaatccggctgcatttcaaaac
aaagaaagctttatacttggttccgtagatgaagatagccaggttgggaataaattaaaa
gtatctagtactgacaatggaaccgtaagtactgttccggaatctgctgttatgaaagtg
gctgaaaatactatgccatctatagtagctattaccagtatttctacaactactgacagt
tggtttggatatgaaattcccaatgagggcagcggctcaggaataattgtcggtaaagac
gaaaaggaacttttaattgcaacaaataaccatgtggttgacggaacagataaaataaca
gttacatttattgatgaaactcaggcagaggcagtaataaagggaacagattccaaggca
gatcttgcagtaattactgttgacttagataagcttagtaaaagtacccttgagaaaatt
aagattgctaaactaggtaactccgatgatattaaggtaggagagatgaccatagcaatt
ggtaatgcaatgggatatgggcaatcccttactgtaggatatgtcagtgccaaagacaga
aaaatcgaagtatctgataattatagctataatacaatgatacttcttcaaacagatgcc
gccattaaccccggtaatagcggtggagccttgctaaatattaagggcgaggtaataggg
attaatacagttaaattcgctgattataaggttgaaggaatgggctatgccatccctata
tcaagagcaataccgattattaatgagttaatgacccgtgaggttcttaagccggaagaa
cagggattccttggtgtttcagtaacggacgttacagaggatgtgtctgagcgatttggt
atacctataggagtgtatataacaaccgtagtagaaaacagtgcagctgaaaaagcagga
ttgaaggaaggggatgttatcagaaaagtaaatgatatagagattacatccggttcccag
cttagtgagttaatctcaagcattcgggtaggtacagagatagagatagaatatatgcgc
catataggtgagggatataaggaagagacggttaaagcaaccctgggaaaaagaacagag
taa
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