Herbaspirillum seropedicae SmR1: Hsero_1870
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Entry
Hsero_1870 CDS
T01268
Symbol
cysS
Name
(GenBank) cysteinyl-tRNA synthetase protein
KO
K01883
cysteinyl-tRNA synthetase [EC:
6.1.1.16
]
Organism
hse
Herbaspirillum seropedicae SmR1
Pathway
hse00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
hse00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
Hsero_1870 (cysS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
hse01007
]
Hsero_1870 (cysS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
hse03016
]
Hsero_1870 (cysS)
Enzymes [BR:
hse01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.16 cysteine---tRNA ligase
Hsero_1870 (cysS)
Amino acid related enzymes [BR:
hse01007
]
Aminoacyl-tRNA synthetase
Class I (G)
Hsero_1870 (cysS)
Transfer RNA biogenesis [BR:
hse03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
Hsero_1870 (cysS)
Prokaryotic type
Hsero_1870 (cysS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1e
DALR_2
tRNA-synt_1g
tRNA-synt_1f
tRNA-synt_1
Phage_tail_APC
Motif
Other DBs
NCBI-ProteinID:
ADJ63379
UniProt:
D8IRQ5
LinkDB
All DBs
Position
2121108..2122499
Genome browser
AA seq
463 aa
AA seq
DB search
MSELKIYNTLARDKQTFSPIEPGKVRLYVCGMTVYDYCHIGHARVLVVFDMVQRWLRASG
YEVTYVRNITDIDDKIIKRAVENGETIAQLTNRFIDAMNEDAAALGVQRPDHEPRATQYV
PQMLDLIGKLEKNGLAYKASDGDVNYSVRDFPGYGKLSGKSLDDLRAGERVDVNTGKRDP
LDFVLWKAAKPAEPDEAKWDSPWGCGRPGWHIECSAMSSDLLGDHFDIHGGGQDLQFPHH
ENEIAQSEGAHQHTFVNYWMHNGFVRIDNEKMSKSLGNFFTIRDVLKKYDPEVLRFFILR
AHYRSPLNYSDAHLDDARQALTRLYTALKDVPPQAGGLVADEAHAVRLADALNDDFNTPV
AIAVLFELANEVNRSRSPVQARQLKALAGILGLLQREPGEYLKGGVAAAEGLGEAEIEAL
IAARKAAKAGKNFAEADRIRAELTEAGIILEDKPGGLTEWRRA
NT seq
1392 nt
NT seq
+upstream
nt +downstream
nt
atgagcgagctcaagatttacaacacgctagcgcgcgataagcagaccttttctccgatc
gaacccggcaaggtacgcttgtacgtgtgcggcatgaccgtctatgactattgccatatt
ggccatgctcgcgtgctggtggtattcgacatggtgcagcgctggctgcgcgcctccggt
tacgaggtgacctatgtgcgcaatatcaccgacatcgatgacaagatcatcaagcgcgcc
gtggaaaacggcgagaccatcgcccaattgaccaatcgcttcatcgatgccatgaacgag
gatgccgccgccctgggcgtgcagcgtcccgaccatgagccgcgcgccacccaatacgtg
ccgcagatgctggacctgatcggcaagctggaaaagaacggcctggcctacaaggccagc
gatggcgacgtcaattattcggtgcgcgatttccctggctacggcaagctctccggcaag
tcgctggacgacctgcgcgccggcgagcgcgtcgatgtcaacaccggcaagcgcgatccg
ctggacttcgtactctggaaagcggccaagccggcggaaccggacgaggccaagtgggat
tcgccctggggctgtggccgtccgggctggcacatcgagtgctcggccatgtccagcgac
ctgctgggggaccacttcgacatccacggcggcggccaggacctgcagttcccgcaccac
gaaaacgagatcgcccagtccgaaggcgcgcaccagcacaccttcgtgaactactggatg
cacaacggcttcgtgcgcatcgacaatgagaagatgtccaagtccctgggcaatttcttc
accatccgcgatgtgctcaagaagtatgacccggaagtgctgcgcttcttcatcctgcgc
gcccactaccgcagtccgctcaattattccgatgcgcacctggacgacgcccgccaggcg
ctgacccgcctgtacacggccttgaaggacgtgccgccgcaagccggcggcctggtggcc
gacgaggcccacgccgtgcgcctggccgatgcgctcaatgatgacttcaatacgccggtg
gccatcgcggtgctgttcgaactggccaatgaggtcaaccgcagccgttcacccgtgcag
gcgcgccagttgaaggcgctggccggcatcctgggcctgttgcagcgtgagccgggcgag
tacctcaagggcggcgtggcggctgcggagggcctgggcgaagccgagatcgaggccttg
atcgctgcccgcaaggccgccaaggccggcaagaactttgccgaagccgaccgcatccgg
gccgaactgaccgaggccggcatcatcctggaagacaagccgggtgggctgaccgaatgg
cggagagcgtga
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