Herbaspirillum seropedicae SmR1: Hsero_2278
Help
Entry
Hsero_2278 CDS
T01268
Name
(GenBank) ATP-dependent DNA ligase protein
Organism
hse
Herbaspirillum seropedicae SmR1
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_A_M
DNA_ligase_A_N
DNA_ligase_A_C
RNA_ligase
Motif
Other DBs
NCBI-ProteinID:
ADJ63777
UniProt:
D8IUB5
LinkDB
All DBs
Position
complement(2574047..2575714)
Genome browser
AA seq
555 aa
AA seq
DB search
MREFSRLYGELDATTSTTRKLAALEDYFGRADPADAAWAVYFLAGGKPRQAVPTSLLKQC
AMEYAQIDEWLFEECYQSVGDLAETIAHILPPASGSNPLGLARWVEERIAPLRGAAPETI
RAALFQAWDELDWQGRFLLSKLIGGGFRVGVSRLLVTRALAAVAQLDAKLVAQRMVGWTD
GRARPDAERFARLIAPADSADQPLQGGQPYPFFLAHPLMDAPATLGPIQQWQVEWKYDGI
RAQLVRRHGQNWLWSRGEELITERFPELAALPLPDGTVIDGEIVIRHPDAGLAAERVAPF
SELQKRIGRKNLSARLLAELPAGLIAYDLLEQDGCDLRGLPQSERRRRLEALVGSHPAAA
LMLAPTLTAKDWDALAQLRASARERGVEGMMLKDIDARYGIGRTRNDGTWWKWKIDPYSI
DAVLIYAQAGHGRRASLYTDYTFALWDGPPEAGSQRKLVPFAKAYSGLTDAEIAVVDQVI
RKSTIEKFGPVRSVQPSMVFEIGFEGIALSSRHKAGMAVRFPRILRQRLDKTVEQADTLA
TLRALLPPSPQPEQR
NT seq
1668 nt
NT seq
+upstream
nt +downstream
nt
atgcgtgaattctcgcggctttatggcgagctcgacgccaccacctccaccacccgcaag
ctggcggccctggaagactacttcggccgcgccgaccccgccgatgcggcctgggccgtc
tacttcctggccggcggcaagccccgccaagcggtccccaccagcctgctcaagcaatgc
gcgatggagtatgcgcagatcgatgaatggctcttcgaagagtgctaccagagcgtgggc
gacctggccgaaaccatcgcccacatcctgccgccggccagcggcagcaacccgctgggt
ctggcgcgctgggtggaagaacgcatcgcgcccctgcgcggagcggcgccagagaccatc
cgcgccgcactcttccaagcctgggacgagctcgactggcaaggccgcttcctgctctcc
aagctcattggcggcggcttccgggtcggtgtctcacgcctgctggtcacgcgggcgctg
gccgccgtcgcccagctggacgccaagctggtggcgcaacgcatggtcggctggaccgat
ggccgcgcccgcccggatgccgaacgcttcgcccgcctgatcgcccctgccgacagcgcc
gaccagccattgcagggcggccagccctatcccttcttcctggcccatcccctgatggac
gcccccgccacgctgggaccgatccagcagtggcaggtggaatggaagtacgacggcatc
cgcgcccagctggtgcgccgccacggccagaactggctgtggtcgcgcggcgaagaactg
atcaccgagcgcttcccggagctggccgccctgcccctgccggacggcaccgtgatcgat
ggcgagatcgtcatccgccatcccgatgccggcctggccgccgaacgtgtggcgcccttc
tccgaactgcagaaacgcattggccgcaagaacctcagcgccaggctgctggcagaactg
cctgccggcctgatcgcctacgacctgctggaacaggacggctgcgacctgcgcggcctg
ccgcaaagcgaacgacgccgccggctggaagcgctggtgggcagccatcctgccgccgca
ctgatgctggccccgaccctgaccgccaaggactgggacgcgctggcgcaactgcgcgcc
agcgcccgcgaacgcggggtggaaggcatgatgctcaaggacatcgatgcccgctacggt
attggccgcacccgcaacgacggcacctggtggaagtggaagatcgatccctacagcatc
gacgccgtgctcatctatgcccaggccggccatggccggcgcgcctcgctctataccgac
tacaccttcgccctgtgggacgggccgccagaagccggcagccagcgcaagctggtgccc
ttcgccaaggcttactcgggcctcaccgatgccgagatcgcggtggtcgaccaggtcatc
cgcaagagcaccatcgagaaattcggcccggtgcgcagcgtgcagcccagcatggtcttc
gagatcggcttcgaaggcatcgccctctccagccgccacaaggccggcatggcggtgcgc
ttcccgcgcatcctgcgccagcgcctcgacaagaccgtggagcaggccgataccctggcc
accctgcgcgccctgctaccgccttccccccaaccggagcagcgctga
DBGET
integrated database retrieval system
