Herbaspirillum seropedicae SmR1: Hsero_4000
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Entry
Hsero_4000 CDS
T01268
Symbol
pcaF
Name
(GenBank) beta-ketoadipyl-CoA thiolase protein
KO
K07823
3-oxoadipyl-CoA thiolase [EC:
2.3.1.174
]
Organism
hse
Herbaspirillum seropedicae SmR1
Pathway
hse00362
Benzoate degradation
hse01120
Microbial metabolism in diverse environments
Brite
KEGG Orthology (KO) [BR:
hse00001
]
09100 Metabolism
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
Hsero_4000 (pcaF)
Enzymes [BR:
hse01000
]
2. Transferases
2.3 Acyltransferases
2.3.1 Transferring groups other than aminoacyl groups
2.3.1.174 3-oxoadipyl-CoA thiolase
Hsero_4000 (pcaF)
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Motif
Pfam:
Thiolase_N
Thiolase_C
ketoacyl-synt
Motif
Other DBs
NCBI-ProteinID:
ADJ65471
UniProt:
D8ISQ5
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All DBs
Position
complement(4587206..4588408)
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AA seq
400 aa
AA seq
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MKDVFICDAIRTPIGRYGGALKDVRADDLGAVPLRALMERNPQVDWKAVDDVIYGCANQA
GEDNRNVARMSLLLAGLPQEVPGSTINRLCGSGMDALGTAARAIKSGETQLMIAGGVESM
TRAPFVMGKADSAFSRQAAIQDTTIGWRFVNALMKQKYGVDAMPETAENVAVDFKVSRAD
QDQFAVRSQAKAAAAQANGTLAQEIVPVVIPQKKGDPITVTQDEHPRATSMEALARLKGV
VKPDGSVTAGNASGVNDGACALLLASAEAVEKYQLKPRARILGMATAGVAPRIMGMGPAP
ASKKVLAQLGMTIDQMDVIELNEAFASQGLAVLRELGVADDDARVNPNGGAIALGHPLGM
SGARLVTTATYQLERTGGRYALCTMCIGVGQGIAMVIERV
NT seq
1203 nt
NT seq
+upstream
nt +downstream
nt
atgaaagacgtatttatctgtgacgccatccgcacccccatcggccgttatggcggcgcg
ctcaaggacgtacgcgccgatgatctcggcgccgtgccgctgcgcgcactcatggagcgc
aacccgcaggtggactggaaggccgtcgatgacgtcatctatggctgcgccaaccaggcc
ggcgaagacaaccgcaacgtggcgcgcatgtcgctgctgctggccggcctgccgcaggaa
gtgccgggcagcaccatcaaccgcctgtgcggctccggcatggatgcgctgggcacggcc
gcgcgcgccatcaagtccggcgagacccagctgatgatcgccggcggcgtcgaatcgatg
acccgcgcgcccttcgtgatgggcaaggctgacagcgccttctcgcgccaggcggcgatc
caggacaccaccatcggctggcgtttcgtcaatgcgctgatgaagcagaagtatggcgtc
gacgccatgcccgagacggcggagaatgtcgccgtcgacttcaaggtcagccgcgcagac
caggaccagttcgccgtgcgcagccaggccaaggccgctgccgcgcaagccaatggcacg
ctggcgcaggagatcgtgccggtggtgatcccgcagaagaagggcgaccccatcaccgtg
acccaggatgagcatccgcgtgcgaccagcatggaagcgctggcgcgcctgaagggcgtg
gtcaagcccgacggcagcgtcactgccggcaatgcctcgggcgtcaacgatggcgcctgc
gccttgctgctggccagtgccgaagcggtggaaaagtaccagctcaagccgcgcgcccgc
atcctgggcatggccacggctggtgtggcgccgcgcatcatgggcatgggcccggccccg
gccagcaagaaagtgctggcgcagctagggatgactatcgaccagatggacgtgatcgaa
ctcaatgaagccttcgcctcgcaaggcctggccgtgctgcgcgaactgggcgtggctgat
gatgatgcacgtgtcaatcccaacggcggcgccattgcactgggccatccgctgggcatg
agcggcgcgcgcctggtgaccactgccacctaccagctggaacgcaccggtggccgctac
gcgttgtgcaccatgtgcatcggcgtggggcaggggatcgcgatggtgatcgagcgcgtg
tga
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