Herbaspirillum seropedicae SmR1: Hsero_4109
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Entry
Hsero_4109 CDS
T01268
Name
(GenBank) porin transmembrane protein
Organism
hse
Herbaspirillum seropedicae SmR1
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Gene cluster
GFIT
Motif
Pfam:
Porin_4
DUF6030
Motif
Other DBs
NCBI-ProteinID:
ADJ65579
UniProt:
D8ITE9
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Position
4708813..4710024
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AA seq
403 aa
AA seq
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MHAKNIARQPSAFKPARLCAALLAAGIALPAWAQSSVTLYGTVDLGLAYSSNQGGASNTY
MNSGALAASKLGLTGTEDLGGGNMALFRLENGFNADTGAQSTAGVLFNRQSYVGLSSKDY
GQVTVGRQYTPYFQYVGALGPTNVLTGATGAHPGDIDALDTTLRMNNSITYTLPTLGGLQ
AGVQYGMGEQAGSAANGSSVSAALRYDYQAFSWSAGYTRLKNLANGNTAGSFGNVGSFAN
NSPVNAGYASADSTQLLATAARYTRGDLMLGLNYSNVQYKAGALSAFSQTAVFNTIGLIG
SYNVSPALVLAAGYSYTAEKARNGISSPAKYNQLSLEEVYSLSKRTALYAIQAYQRASGQ
TLRAGGVGSSIVNAVASVGDSQNGTPSSGSGQFVAMLGIRHSF
NT seq
1212 nt
NT seq
+upstream
nt +downstream
nt
atgcacgccaagaacatcgctcgtcaaccatccgccttcaagccagcccgcctctgcgcg
gcgctgctggctgccggcatcgccctgcccgcgtgggcgcaatcgtccgtgacgctctat
ggcacggtcgatctcggcctggcctacagcagcaaccagggcggcgcctccaatacctac
atgaactccggcgcgctggcggccagcaagctgggcctgaccggcacggaagacctgggc
ggcggcaacatggccctgttccggctggagaatggtttcaatgccgataccggcgcccaa
tcgactgctggcgtgctgttcaaccgccaatcctatgtcggtctgtccagcaaggactat
ggccaggtcaccgtgggtcgccagtacacgccctacttccagtacgtcggcgcgctgggc
ccgaccaatgtgctcaccggtgcgaccggcgcacacccgggcgacatcgacgcgctcgat
accacgctgcgcatgaacaactccatcacctacaccctgcccacactgggcggtctgcag
gcgggcgtgcaatacggcatgggcgagcaggccggcagcgcagcgaatggctccagcgtg
agcgccgccctgcgctatgactaccaggccttctcgtggagcgccggctatacgcgcctc
aagaacctggccaacggcaataccgccggcagcttcggcaacgtcggcagcttcgccaac
aactcgccggtcaatgccggctatgcgtccgccgacagcacgcaactgctggccaccgca
gcgcgctatacccggggcgacctgatgctggggctgaactattccaatgtgcagtacaag
gccggcgcgctgtcggccttcagccagactgctgtcttcaataccatcggcctcatcggc
agctacaacgtcagcccggcgctggtgctggccgccggctacagctacaccgccgaaaag
gcgcgcaacggcatctcctcgccggccaagtacaaccagctctcgctggaagaggtctat
tcgctctccaagcgcaccgcgctctatgcgatccaggcctaccagcgcgccagcggacag
acgctgcgcgctggcggcgtgggcagcagcatcgtcaatgcggtggcctcggtgggcgat
tcgcagaacggcacgccctccagcggcagcggccagttcgtggccatgctgggtatccgg
cattcattctga
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