Herbaspirillum seropedicae SmR1: Hsero_4538
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Entry
Hsero_4538 CDS
T01268
Symbol
tsr
Name
(GenBank) methyl-accepting chemotaxis transducer transmembrane protein
Organism
hse
Herbaspirillum seropedicae SmR1
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Gene cluster
GFIT
Motif
Pfam:
MCPsignal
4HB_MCP_1
HAMP
HAMP_2
Latarcin
Sigma70_ner
Mod_r
Motif
Other DBs
NCBI-ProteinID:
ADJ66004
UniProt:
D8IWW7
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Position
complement(5198860..5200653)
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AA seq
597 aa
AA seq
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MKLKDIKISVRLAVCFAVLIGVMCLITGVGMKSLSSISKSSALIVEDRYEKIALAVEIRD
NVNGAARNLRNALLGRNLEEATRYLDRSAANSAKTTEALGKMEKILSTARGRELFQSIQE
ARSAYNTPRDKLRELIKQQKKEEAVELLFTQVIPAQDKYFQVLDQFVAFQKSLMEQSVTE
GRDTTQSAIAMMLGLSAVAIALCVIAAWLVTRSITRPLNEAVSVASAVAAGDLTVQIGAT
SKDETGALLAALKSMNDSLHRIVSEVRQGSDTINTASAEIATGNLDLSSRTEEQAGALEE
TASAMEELTSTVKQNADNARQANSLAATASEVAVQGGSVVGQVVQTMGEINDASRKIVDI
ISVIDGIAFQTNILALNAAVEAARAGEQGRGFAVVASEVRTLAQRSASAAKEIKALIDDS
VSRVDNGSRLVEQAGTTMTEVVASVRRVTDVVAEISAASNEQSDGIEQINHAITQMDQVT
QQNAALVEEAAAAAQSLQEQSTRLSATVSVFKLSSHDTPHAAAPRKPAPAQAASRPAAAA
TVRTAPSKPAAVLASSASPASPASTTPKALPSKPAAPASAKAGSKAMAADDGDWEQF
NT seq
1794 nt
NT seq
+upstream
nt +downstream
nt
atgaaactcaaggacatcaagatcagcgtgaggctggcggtttgctttgcggtattgatt
ggggtgatgtgtctgatcaccggcgtggggatgaaaagcctctccagcatcagcaagtcc
tctgcgctgatagtggaagaccgctacgagaagatcgccctggccgtcgaaatccgcgac
aacgtcaatggcgcggcgcgcaacctgcgtaacgccctgctgggccgcaacctggaagag
gcgacccgctacctcgatcgcagcgccgccaacagcgccaagacgaccgaggcgctgggc
aagatggagaagatattgtcgaccgcgcgtggtcgcgagctgttccagtccatccaggag
gcgcgctcggcctacaacacgccgcgcgacaagctgcgcgagctgatcaagcagcagaag
aaggaagaggccgtcgagttgctgtttacccaggtgatcccggcccaggacaagtatttc
caggtgctcgaccaattcgtggccttccagaaatcgctgatggagcagagcgtgaccgaa
ggccgcgacaccacccagtccgccatcgccatgatgctgggcctgtcggccgtggccatc
gccttgtgcgtcatcgccgcctggctggtcacgcgttccatcacccgtccgctcaacgag
gctgtcagtgtggccagcgcggtcgcggcgggcgacctgaccgtgcagatcggcgccacc
tccaaggatgagaccggtgcgctcctggccgccctcaagtccatgaatgacagcctgcac
cgcatcgtcagcgaagtgcgccagggcagcgataccatcaataccgcttcggccgagatt
gccaccggcaacctcgacctgtcctcgcgcaccgaagaacaggccggcgcgctggaagaa
accgcctcggccatggaagagctgacctccaccgtcaagcagaacgccgacaacgcccgc
caggccaacagcctcgccgccaccgcttcggaagtggcggtgcagggcggcagcgtggtg
ggacaggtggtgcagaccatgggagagatcaacgacgcttcgcgcaagatcgtggacatc
atcagcgtcatcgacggcattgccttccagaccaacatcctggccctgaacgccgccgtg
gaagcagcgcgcgccggtgaacaagggcgcggcttcgcagtggtggcctccgaagtgcgt
acgctggcccagcgcagcgcctcggccgccaaggagatcaaggccctcatcgatgattcg
gtcagccgcgtggacaatggcagccgcctggtggaacaggccggcacgaccatgaccgaa
gtggtggccagcgtgcggcgcgtcaccgatgtggtggccgagatttcggcggccagcaac
gaacagagcgacggcatcgagcagatcaaccacgccatcacgcagatggatcaggtgacg
cagcagaacgccgccctggtcgaagaggccgctgcggcagcccaatcgctgcaggaacaa
tcgacgcgcctgtcggcgaccgtcagcgtgttcaagctcagcagccacgacaccccgcat
gcggccgcaccgcgcaagcctgcgccggcgcaggctgcgtccaggccggcagccgccgct
accgtgcgcaccgcgccgtccaagccggccgctgtcctggcttcctcggcttccccggct
tccccggcttccactacgcccaaggcgctgccgtccaagccagccgcgccagccagcgcc
aaggccggcagcaaggccatggcggcggacgatggggattgggaacagttctga
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