Histophilus somni 2336: HSM_1944
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Entry
HSM_1944 CDS
T00673
Name
(GenBank) ABC transporter related
KO
K10558
AI-2 transport system ATP-binding protein
Organism
hsm
Histophilus somni 2336
Pathway
hsm02010
ABC transporters
hsm02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
hsm00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
HSM_1944
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
HSM_1944
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
hsm02000
]
HSM_1944
Transporters [BR:
hsm02000
]
ABC transporters, prokaryotic type
Saccharide, polyol, and lipid transporters
AI-2 transporter
HSM_1944
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
AAA_21
RsgA_GTPase
MukB
AAA_29
AAA_23
AAA_30
T4SS_CagC
AAA_13
AAA_27
Motif
Other DBs
NCBI-ProteinID:
ACA31737
LinkDB
All DBs
Position
2203461..2204969
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AA seq
502 aa
AA seq
DB search
MKETESNPTPLLEACDVSKAFSGVEVLKSINFSLYSGQVHTLLGGNGAGKSTLMKIIAGI
QLQDTGTLKIHGKVRTNLTPSKAHQLGIYLVPQEPLLFSNLSVKENILFGLPRTMDLQSK
LTALLTELNSHLNLDMQAGLLDVADQQLVEIMRGLMRDAQILILDEPTASLTPVETENLF
GQINSLLIKGVGIVFISHKLSEVWQIADWVSVMRDGYIALSEPIDKINHDDVIQAITPRA
KNASLTESQQLWLDLPGHKRVKSTEFPLLTVENFTGEGFRDINFEIYPGEILGLAGVVGS
GRTELAETLYGLRKAKSGKVIFCDELINSLSVKQRLKRGLVYLPEDRQASGLHLDSPLSW
NTCGLTYHDMGFWIDESKEKAILERYYHAIGIKFNHVEQSVRTLSGGNQQKILIAKCLEA
DPRLLIVDEPTRGVDIGARADIYQLIKSIAKQNVAVLFISSDLEEIEQMSSRVLVMHDGK
LSQSLKGEDINTDNIMRLAFSS
NT seq
1509 nt
NT seq
+upstream
nt +downstream
nt
atgaaagagacagaatctaatcctacgcctttactggaagcttgtgatgtaagtaaagct
ttctctggtgttgaagtactaaaatccattaacttttccctttattctgggcaggtgcat
actctacttggtggaaacggtgctggcaaatcaaccttgatgaaaattattgccggtatt
cagctgcaagatactggtacgttaaaaattcatggcaaagtccgaaccaatttaacacca
agcaaggcacatcaattaggtatttaccttgttccgcaagaacctttgttattttctaat
ttgagtgtaaaagagaatattttattcggtttgccaagaacaatggatttacagtcaaag
ctcacagcgttgttgacggaactaaactcacatttaaatttggatatgcaggctggttta
ttagatgttgctgatcagcagttagttgaaattatgcgaggcttaatgcgagatgctcag
attctgattttagatgaacctaccgcctcattaacaccagtggaaaccgaaaatctattc
ggacagataaattccttactcatcaaaggggtagggattgtttttatttcgcataaattg
tctgaagtttggcaaattgctgattgggtgagtgtaatgcgagatggttacattgcctta
agcgagccaattgacaagatcaatcacgacgatgttattcaggcgattactcctcgagct
aaaaatgcatcattaacagaaagtcagcagttgtggttggatttaccagggcataagagg
gtgaaatcgaccgaatttccattattgacagtagaaaatttcactggtgaaggattccga
gatatcaactttgaaatttatcctggcgagattttaggattagcaggcgtagtcggctca
ggtagaaccgaattagctgaaacgctgtatggtttgcgtaaagccaaatccggtaaagtg
atattttgtgatgagctaattaattcactgtccgttaagcaacggcttaaacgaggctta
gtgtatttgcccgaagataggcaagcctctggattgcatttggattcaccattaagttgg
aatacctgcggattaacctatcatgatatgggcttttggattgatgagtccaaggagaaa
gcaattttagaacgctattaccatgctatcggaataaaatttaatcatgttgagcaatcg
gtacgtaccttatcaggtggtaatcagcaaaaaattttgatcgcaaaatgtctggaagcc
gatcctcggttgttgattgttgatgagccaactcgtggcgttgatattggtgcgagagca
gatatttatcaattaataaaaagtattgccaaacaaaatgtagccgtgttgttcatttca
tctgacttggaggaaatagaacaaatgtctagtagagttttggtaatgcacgacggtaag
cttagtcaatcgttgaaaggtgaagatatcaatactgataatattatgcgactggcattc
agtagttag
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