Hippoglossus stenolepis (Pacific halibut): 118103405
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Entry
118103405 CDS
T08308
Symbol
setdb2
Name
(RefSeq) histone-lysine N-methyltransferase SETDB2 isoform X1
KO
K18494
[histone H3]-lysine9 N-trimethyltransferase SETDB2 [EC:
2.1.1.355
]
Organism
hsp
Hippoglossus stenolepis (Pacific halibut)
Pathway
hsp00310
Lysine degradation
hsp01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
hsp00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
118103405 (setdb2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
hsp03036
]
118103405 (setdb2)
Enzymes [BR:
hsp01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.355 [histone H3]-lysine9 N-trimethyltransferase
118103405 (setdb2)
Chromosome and associated proteins [BR:
hsp03036
]
Eukaryotic type
Histone modification proteins
HMTs (histone methyltransferases)
HKMTs (histone lysine methyltransferases)
118103405 (setdb2)
Heterochromatin formation proteins
Other heterochromatin formation proteins
118103405 (setdb2)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
SET
Pre-SET
MBD
DUF3723
Motif
Other DBs
NCBI-GeneID:
118103405
NCBI-ProteinID:
XP_047195018
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All DBs
Position
24:complement(292649..296232)
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AA seq
648 aa
AA seq
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MREAAAALDPRDVERAQAFWAEEDVDQLFNGVLSYLDHLKRVLKKNTATDKELVQALKLL
ESLDLCPSVSVQDSSVVQVVIGAGEVLPADFPRHSPSPSTSPVPPTNGLSSPAAPPAVRE
ELLPLLAPVQLQYHPHTCCKTCMPSLPSMPQSMPLFWAQNPLKVPLLCGFKRLSAVQLMS
PGGGAEPVESQQAEQLDADDWDVVYRAPCGQILRNHDDVMDFLLATEIDDVLQVDFFTFN
RSVHLDPPVAPRSQRPELDLSRGVEPTPVELCPSDGGARPAEFRYRRDRWPHGCFLSRGA
TLFNACCDCVDGCTDAQSCACIAMNRGGRCYSHHRLSEPESSGLYECGPWCGCDRARCQN
RLVQRGIRVRLQVFQTEDRGWGVRCRDDVDRGTFVCIYAGVILQRVQTPLEPLPPKLARF
DLPSDDEVEVVTEWLAPPVLEGRSNLLETSPPPKSPPTSPPLHVPVIQRPPDAAALQVQT
VVLGGPEPPPPSGPITLQSKVKGHRPSGDQKLGVTVETAKKVSMKSGSETSEQKSLKRAA
KVEDVHVLDASREGNVSRFINHSCRPNLFVQNVFTDSHDPAFPVIAFFTSRRVKAGTELT
WNYSAVGHTAVLPKQEVTCLCGSDGCRGQFVVEENLCDVCEVEGREAR
NT seq
1947 nt
NT seq
+upstream
nt +downstream
nt
atgagagaagcagctgcagcgctggatcctcgagatgttgagcgagcccaggctttctgg
gcggaggaggacgtggatcagttgtttaacggcgtcttgtcgtacctggaccacctgaag
agagtcctgaagaagaacacggccacagacaaagagctggttcaggcgttgaagctgctg
gagtctctggacctgtgtccctcggtgtcggttcaggactcgtccgtcgtccaggtggtc
atcggtgcaggtgaggtgctgccagctgacttcccccgccacagtccctccccctcgacc
tcccccgtacctcccactaatggcctgtccagccctgcagcgccccctgctgtcagagag
gagctgctgcctctgctggcccctgtccagctgcagtaccacccccacacctgctgcaag
acgtgcatgcccagtttacccagcatgcctcagtccatgcctctgttctgggcacagaac
cctctgaaggttccgctgctctgcggctttaagagactgagcgccgtgcagctgatgtca
cctggagggggggcggagcctgtggagtcccagcaggcggagcagttggatgcagacgac
tgggacgtggtttacagagcgccttgtggacagatccttcgtaaccatgacgatgtgatg
gatttcctgttggctacggagatcgacgacgtcctgcaggtcgacttcttcaccttcaac
cgctctgttcatttggaccctcctgtggcgccgaggtctcagcgtccagagctggacctg
agtcgtggcgtggagcccacaccggtggagctgtgccccagtgacggcggcgcccgtccc
gctgagttccgctacaggagggaccgctggccgcacggctgcttcctgagccgcggcgcc
acgctgttcaacgcctgctgcgattgtgtcgacggctgcacagacgcacagagctgcgcc
tgcatcgctatgaacagaggagggcgctgttacagccaccacaggctgagtgaacccgag
tcgtcagggctgtatgagtgcggtccgtggtgcggttgtgaccgggctcgttgtcagaac
cgtctggtccagcgagggatcagagtccggctccaggttttccagaccgaggaccgtggc
tggggcgtgcgttgccgtgacgacgtggaccgtggcacttttgtttgcatctacgcaggt
gtgatcctgcagcgggtccagactcccctggagcctctgccgcccaaactggcgaggttc
gatctcccgtcagacgacgaggtggaggtcgtcactgagtggctggccccgccggtcctg
gaggggcggagcaacctgctggagacgtctccgccacctaagtccccgcccacctcccca
cctctgcacgtcccagtgatccagaggccgccggacgccgctgcgctgcaggttcagacg
gtggttctgggaggtccggagccgccgcccccttcaggtcccattactttacaatctaaa
gtgaagggacatcgtccgtcaggtgaccagaagctcggcgttaccgtggagacggcgaag
aaggtgagcatgaagagcggctcagagacgtcggagcagaagagtctgaagagagcggcg
aaggtggaggacgttcatgttctggacgccagccgggagggaaacgtgagccgcttcatc
aaccacagctgccggccgaacctcttcgtccagaacgtcttcaccgactcccacgacccc
gccttccccgtcatcgccttcttcaccagcaggagggtgaaggccggcacggagctcacc
tggaactactccgctgtcggacacacggccgtgctgccgaaacaggaagtgacgtgtctc
tgcgggagcgatggttgtcggggtcagttcgtcgtcgaggaaaacctgtgtgacgtctgc
gaggtcgaaggtcgagaggcccggtga
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