Hippoglossus stenolepis (Pacific halibut): 118104842
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Entry
118104842 CDS
T08308
Symbol
tnfrsf1b
Name
(RefSeq) tumor necrosis factor receptor superfamily member 1B isoform X1
KO
K05141
tumor necrosis factor receptor superfamily member 1B
Organism
hsp
Hippoglossus stenolepis (Pacific halibut)
Pathway
hsp04060
Cytokine-cytokine receptor interaction
hsp04920
Adipocytokine signaling pathway
Brite
KEGG Orthology (KO) [BR:
hsp00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
118104842 (tnfrsf1b)
09150 Organismal Systems
09152 Endocrine system
04920 Adipocytokine signaling pathway
118104842 (tnfrsf1b)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04050 Cytokine receptors [BR:
hsp04050
]
118104842 (tnfrsf1b)
04090 CD molecules [BR:
hsp04090
]
118104842 (tnfrsf1b)
Cytokine receptors [BR:
hsp04050
]
Tumor necrosis factor receptors
TNF receptor superfamily
118104842 (tnfrsf1b)
CD molecules [BR:
hsp04090
]
Proteins
118104842 (tnfrsf1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TNFR_c6
TMEM154
PDGLE
Syndecan
Adeno_E3_CR2
DUF5527
Motif
Other DBs
NCBI-GeneID:
118104842
NCBI-ProteinID:
XP_035007978
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All DBs
Position
3:12271553..12277054
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AA seq
481 aa
AA seq
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MKEILALLVLLCVRTTTPYRPDSDGRCRNSTTEYVVNNRCCKKCPPGQRLSQKCSDTTES
VCKQCDPNQYMEKWNYAPNCSPCRICKPYKGLQYAQNCSSITRAGCVCKPGMYCIVEFDD
PYCAECRKYRLCKAGSGVSVPGTAYSDVRCERCPNGMFSNTSSLTDPCRPHTECHGKAVA
RKGNAASDNLCEEGAVISTLLPDTTKGYHPGTLFSTADTIRSTVLAISDATLSVSASVSN
EVFNHSTTSLPPYKAPGISLAAVIAGVIGFLLIFIIIILVFLCKAVRSKDAEKFHPKVDA
NGNCESDNKQITQSYLGETQLMSFTVTCPEQQSLLDKAGACSDYSQSSNYTDTSTRTDGG
GSHDSIGPLQSTLALNNSYPAVSEPMTLISNTEPVTPQPSVPSESSSQPTSPQIISPLTA
NPQFNVNITFHIGNGSCGTPSVTQLTESDSHLPFGEEEESFSSPQQEDGKHPLTPVQDSA
S
NT seq
1446 nt
NT seq
+upstream
nt +downstream
nt
atgaaggaaatactggcactactggttctgctgtgtgtccgaaccaccacgccctataga
ccagactcagatggaaggtgtcgcaactcgacaacagagtacgtggtaaataatcgatgc
tgcaagaaatgcccccctggacagcgactgagtcagaaatgctctgacaccactgagagt
gtgtgtaaacagtgtgacccaaaccagtacatggagaaatggaactacgctccaaactgc
tcaccctgtcgcatatgcaaaccatataaaggtctgcaatatgcccaaaactgctcctca
atcacacgggccgggtgtgtgtgcaagcctgggatgtactgcatcgtggaatttgatgac
ccttactgtgcagaatgtagaaagtacagactatgtaaagctggttctggagtttctgtg
ccagggacggcgtactcagatgtgaggtgtgaacggtgtcctaatgggatgttctccaac
acaagctccttgacggacccctgtcggcctcacacggagtgtcatgggaaggctgttgct
agaaaaggcaacgctgcgtccgacaacctgtgtgaagaaggggctgttatatccacattg
cttccagacacaaccaaagggtatcaccctggcactttgttttcgactgcagatacaata
aggagcacagtcttagcgatctcagacgccacattgtccgtcagtgcatctgtttcaaat
gaagtattcaaccattcaacaactagcctaccaccatacaaagcacctggaatttcactg
gctgccgtcattgccggagtcattggattccttttgattttcattataattattctggta
ttcctttgtaaagcagtaaggagcaaagatgctgaaaaatttcacccgaaagtagatgca
aatggaaactgtgagagtgataataaacagatcactcagagttatttgggggaaacgcag
ctgatgtctttcacagttacgtgtccagaacaacagtctctacttgacaaagcgggagcc
tgcagtgactacagtcagtccagcaactacaccgacacttcaaccagaacagacggcggt
ggcagccatgactccattggccctctgcagtccacgttagctttaaacaattcataccct
gctgtgtcagagcccatgactttaatttccaacacagagcctgtcacacctcagcccagt
gtcccctcagagtcctcctctcagcctaccagcccccagatcatcagccccctgactgcc
aatccccaattcaatgtcaacatcactttccacattgggaacgggtcttgcgggacaccg
tccgtcacacaattaacagaatcagacagtcacctcccctttggagaggaagaggagtcc
tttagcagtccacaacaagaagatggcaaacacccgctgacgccagtgcaggacagtgca
agttaa
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