Hippoglossus stenolepis (Pacific halibut): 118110204
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Entry
118110204 CDS
T08308
Name
(RefSeq) LOW QUALITY PROTEIN: zinc finger C3H1 domain-containing protein
Organism
hsp
Hippoglossus stenolepis (Pacific halibut)
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Gene cluster
GFIT
Motif
Pfam:
zf-C3H1
TPR_14
TPR_19
TPR_1
TPR_12
Motif
Other DBs
NCBI-GeneID:
118110204
NCBI-ProteinID:
XP_035013773
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Position
5:28813820..28833752
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AA seq
2086 aa
AA seq
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MEVNRSPPEEGELEDGEICDDETEESVPLRRGEGSRPGGAAPPRTRKPRQHPHMLPRMGH
PPPDFRLRMPYNLGAHGHGPFPPALRQQCGPSGPDRPPSPLPPPLPPPPGLGPRGEPSPR
SSFWERSHGALGRFRHRVMPNGGRGAWSRGSRGGGGPGPGCRAPVGRYGPGESHGNKTDS
PSRKQKLQGRNQTRKATHSVSKAENNVDESFEDLLSKYKQIQLELECIRKEETMALEPKA
SPAREDVPDHTASITETRPEPEAAHSLAGGEEASELERKVFQAFNIKPLRQKLPAPALLD
ELKDKQSEAGRGGGAEKQGEEEETREDGGGTEPRPEPEAEEKTCSCCNEETDGDEKDKHK
KMCSCCRESSASSEDSAVSPDKPVVKVEEEELSELQLRLLALQSASKKWQQKEQQVMKKS
KDRITRATQEKKSGPGPGAALATRQRVTTRSVSSAAAAAAAAAAAAAQRNRARSKPLDRD
RDRTKIGTRPPERDRPKQSPKPGPKALQDRGRTPGKPHMTKKMISPGSVAKQAFRKQQLR
TWKLQQQRQQEEKRRQDEDERRKREEEIRRIRDLSNQDEQYNRFMKLVGGKMRTRSKSRD
REHRKSTGKPGLDTSGNLYQYDNYDEVAMDTDSETSSPVPSPTRVSFSTDGAGCFSQVSL
YVTDSAQFGLDFSQPFLSPILSTLPPPPPPXPPPPDELEPPPKPPLADEEEEEEMLLRET
CLMSMANKRVAVNEEKSSSGPPSPSCQPPGGVPLPPRGNLSTVSLNTVSQPRTNKFTRGH
PPRAPLVLPRHKSVVVSLNDSDDSDSDVDACSSTQTVFGGLEFMIKEARRTVEAAKPKGA
SGSEKENNPVRTPEALPEAKKAEYRQLKEEIASREKQKMLKDQGPWSSSSALTESVINPS
ARMTVEAKLSEAEQRFNKNRELLQRDEAVLRHLLQQELKKKESLKVAEAKVIKLREQLQA
SEKIVSANKTLLKKLQEQVHRVEHRVSIKKSLAVRLEQELAQAQLLAGRGSKRKSDTNQT
PLSKLQRVDAAPRGSDRHFAELIAQKQWLQQLESEYALKIQRLKEAQALRHKGVPSEPPA
RAPTPPDPQAQIPPPSSPFPLPQPSLHDLTQDKLTLDSEDVAEVDEPEPAPTPAAATAAR
GPRRHSLRQSSCSFTKPNLEQLSSTPAKDSSSKPAKTSSSCEAPAEMLTGLDLDALKLRH
RQQARLGELLKSELHKLGQHIDNAPSGQAVSMEVDTTSSPLGSPELKPVPFGPYHSPLLV
FKSYRFSPYYRTKEKLSLSSVTYSNAIEPRKCFCRFDLTGTCNDDDCRWQHMRNCSLTAN
QLFQDILSYSLSLIGCSESSSDDDVGIATEKYIKKLFGTNKDRMGVDQKAVLLVSKVNES
KRHVPPFTTCKDVRRWRPKPSVQTGLGPEDDSEHEAAPGNITPGRSDDRTKISHSAADVC
ITSDDKRYFDSETDDISNLESSVLENPGDTQLWIKLAFKYLSQSETSAGESLEAALNTLS
RALESNCDDPEVWSHYLSLFSRRGSREEVQEMCEMAVEHAPDYRVWWNYLNLESSFEGRD
YVCDRLLHFLLTEASSRLTDKLSFQLMEALLYRVQLNLFTGRMESALAILQNALKSADER
SIADHLIAKDRALVWLSYIHLTEFDRLPSSLCDPAESGPSRLVSRESFLLPWRSPQDIST
PLDILIALFQDAIHRCTDKSLSQSERTLACLPLHNNLIILNKLLQRYDEAVVLCESLLEL
CPESCALRDALADLHIRKGNSDQAVSMWLHALAECPNNAEVFYHSCKFLMTQEKSSAVAP
LFRGFILSLCEDEQSQKKPVDVLRHILGFPSEELLRSPIVKKDLQEQLNQQTPYLHLIHC
RWQWLHGSVEQTMDAFERALGSPLQLEELHTLWLDYLMFSCSQQSCAPSRQFSHLVHRCL
STVPSRLELPFNPAEFWNCYRFHNQVVTLYLNRLPQSQHAPVLERLRYAMPTNTELSLRL
LFVEWQDGNIEHVKFQTRMLTSNFPKSLTHWKIAIAMETELQESCEVRLLYHQALQNLPL
CAALWKHRLLFEAAQGAASSRLKRLVDRCGQVGVSLVVGQAQGGDQ
NT seq
6261 nt
NT seq
+upstream
nt +downstream
nt
atggaggtgaaccggtctccccccgaggagggggagctcgaagacggagagatctgcgat
gatgaaaccgaggagagtgtgcctctccggcggggggagggtagcaggccgggcggagcg
gctcctccgcggacacggaaacctcgccaacacccgcacatgctgcctcgcatgggccac
ccgccgccggacttccgcctccggatgccgtacaacctcggagctcatggacacggtcct
ttccccccggccctccggcaacagtgcgggccgagcgggcccgatcggcctccctctccg
cttccgcctcctctgccgccgccgccgggactcggtcctcgcggtgagcccagcccgcga
tccagcttctgggagcggagccacggagcccttggcaggttcaggcaccgggtcatgccg
aacggtggacgtggggcctggagtcgaggcagccgcggggggggaggccccggccccggc
tgcagagccccggtcggtcgttacggacccggagagagtcacggtaacaagaccgactct
ccatcgagaaaacagaagcttcagggcaggaaccagacgaggaaagcgactcactctgtt
tccaaagcagagaacaatgttgacgaatccttcgaggaccttctgtccaagtacaagcag
attcagctggagctggagtgtatccgcaaagaggagaccatggccctggagcccaaagcc
tcgcccgccagagaggacgtccccgaccacacggccagtatcacggagaccagaccagag
cctgaggcggctcatagtctggcaggaggcgaggaggcatcggagctggagaggaaggtg
ttccaggcgttcaacatcaaaccattgcgtcagaaacttccggctcccgctctcctggac
gagctgaaggacaaacagagcgaggcaggcagagggggcggggcagagaaacagggtgaa
gaagaagaaacgagagaagatggaggaggaacagaaccaaggcctgaacctgaggccgag
gagaagacctgttcgtgctgcaacgaagaaaccgacggagacgagaaggacaaacataaa
aagatgtgctcctgctgcagagagtcgtcggcgtccagcgaggattctgccgtctctcct
gacaagcccgtggtgaaggtggaggaggaggagctgtcagagctgcagctgcgtctcctc
gctctgcagtcagccagtaagaagtggcagcagaaagagcagcaggtgatgaagaagagt
aaagaccggatcactcgagccactcaggagaagaaatctggccccggccccggggccgcc
cttgccaccagacagagagtgaccaccaggtcagtttcctctgctgctgctgctgctgct
gctgctgctgctgccgctgcacagaggaatagagctaggtccaaacctctggacagggac
cgagacagaaccaagatcggcacccgacccccagagagagacagacccaaacagagtcca
aaacctggtcccaaagctctgcaggacagagggcgcacaccaggaaaacctcacatgacc
aagaagatgatcagtccaggctcggtggcaaagcaggccttcaggaagcagcagctgagg
acatggaaactgcagcagcagcgacagcaggaggagaaacgacggcaggacgaggacgaa
cgacgcaaacgagaggaggaaatccgcagaatccgcgacctgtccaaccaggacgagcag
tacaaccgcttcatgaagctggtgggaggaaagatgaggacgcgcagtaaatccagggat
cgtgaacacaggaagtccacaggtaaaccgggtctggacacctcgggtaacctctaccaa
tatgacaactatgacgaggtggcgatggacacggacagtgagaccagttcaccagtcccg
tctccaacacgcgtgtcgttcagcactgacggtgcaggatgtttctctcaggtgtctctg
tatgtgacggactcggctcagttcggactggatttctctcagcctttcctctcccccatt
ttgtccactcttcctcccccgcctccccccntcccccctccaccagacgagctggagccc
ccccccaaacctccattggctgacgaggaggaggaagaggagatgctgctgagggagacg
tgtctcatgtccatggccaacaagagggtggcagtgaacgaggagaagagctccagtggt
ccgccctcccccagctgccagccacctggaggtgttccgctgccacccagagggaacctg
agcaccgtcagcctgaacacggtgtcgcagccacggaccaacaagttcaccagaggacac
ccccccagagcaccgctggtgctgcccagacacaagtcggtggtggtttcgctcaatgat
tcagacgacagtgactcagatgtggacgcctgcagctccacacagacggtgttcggagga
ctggagttcatgatcaaagaagccaggaggacggtggaggcagcgaagcctaaaggagcc
tcaggatctgagaaggagaacaaccccgtcagaactccagaggctttacctgaagcaaag
aaggcagagtaccgtcagctcaaagaggaaatcgccagcagagaaaagcagaagatgttg
aaggaccagggtccttggagctccagctctgctttgaccgagtctgtgatcaatccatca
gcgagaatgacagtggaggcgaagctgagtgaggccgagcagagattcaacaagaacagg
gagctgctgcagagagatgaggccgtcctcagacatctgctgcagcaggagctgaagaag
aaagagtctctgaaggttgctgaggccaaagtcatcaaattgagggagcagctgcaggcc
tcagagaagatcgtcagtgccaacaagacactcctcaagaagctgcaggaacaggtgcat
cgtgttgaacatcgggtgtccatcaagaagagtctggctgtcagactggagcaggaactg
gcccaggctcagcttctggctggacgaggatcaaaacgcaaatcagacaccaaccaaacc
cctctcagtaaactgcagcgggtggacgctgctcctcgtggctcagaccgtcactttgct
gagctgatcgctcagaagcagtggctgcagcagctggagtctgaatacgctctgaagatc
cagaggctgaaggaggcccaggcgctgcgtcacaagggagtcccgtcagagccgccagca
cgagcccccacccctccggacccgcaggcccagatcccacccccctccagtcccttccct
cttccccagccttccctgcacgacctcacccaggacaaactcacactagacagcgaagac
gtagctgaggttgacgaaccagaacctgcacctacacctgctgccgccactgctgctaga
ggcccccgtcgccactcgctccgtcagtccagctgctctttcacgaaacccaacctggaa
cagctgagctccacaccagctaaagacagcagctccaaacctgccaagacttcgagcagc
tgcgaggctcctgcagagatgcttacggggctggacctggatgctctgaagctccggcac
cggcagcaggcgcggctcggagagctgctgaagagcgagctgcacaaactgggacagcac
attgacaacgcccccagtggacaggcggtttctatggaggttgacacgacatcaagtccg
ttaggaagtccagaactgaaacctgttccctttggaccgtaccacagtccactactggtt
ttcaagtcgtataggttcagtccgtattacaggaccaaggagaagttatcgctgagctct
gtcacgtacagcaacgccatcgagcccaggaagtgcttctgtcggttcgatctcacagga
acctgcaacgacgacgactgcagatggcagcacatgagaaactgctctcttacggccaac
caactcttccaggatattctgtcgtacagtttgtctctgattggctgttccgagagcagc
tcggacgacgacgtcggtatcgccacagagaaatacattaagaagctgtttggcacaaac
aaagatcggatgggcgtcgatcaaaaggccgtcctcctcgtcagcaaagtcaacgagagc
aaacgacacgttcctccgttcaccacgtgtaaagacgtgaggaggtggaggccgaagccg
tcggtacagactggccttggccctgaagacgacagcgagcacgaagccgcacccggaaac
atcacacctggaagatccgacgaccgcactaagatcagccactctgctgcagacgtgtgc
atcacgtcagacgacaagcgttactttgacagtgagacggacgacatatcgaacctggag
agcagcgtcctggagaatcctggagacactcagctgtggatcaaactggcttttaagtac
ctgagtcagagtgaaacgtctgcgggcgagagtttggaggccgccctcaacacgctgtct
cgtgctctggaaagtaactgtgacgacccggaggtgtggagccactacctgtctctgttc
tccagacgaggcagcagggaggaggtgcaggagatgtgtgagatggctgtggagcacgcc
cccgactacagagtgtggtggaactacctgaacctggagagctcgttcgaggggcgggac
tatgtctgtgaccgtctgctgcacttcctgctgacggaggcgtcgtcacgactcacagac
aaactgtccttccagctgatggaggctctgctctacagagtccagctcaacctgttcacc
ggcaggatggagagcgcgctggccatcttacagaatgctttgaaatcagctgatgagcgg
agtattgccgaccacctgatcgccaaagaccgggcgctggtgtggctctcctacatccac
ctgacggagttcgaccggctgccgtccagcctttgtgacccggccgagtccggtccgtcc
agattggtcagcagagagtccttcctgctgccgtggagatcaccacaggacatcagcacg
ccactcgacatcctcatcgctctctttcaagatgccatccatcggtgcaccgacaagtct
ctgtcacagagcgagaggacgctggcttgtctgcctcttcacaacaacctcatcatcctc
aacaaactgctgcagaggtacgacgaggctgttgttctgtgtgagtctctgctggagctc
tgtcctgagtcctgcgctctgcgagacgctttggccgacctccacatcaggaaaggaaac
agcgatcaggcggtcagcatgtggctgcacgctctggccgagtgtcccaacaacgccgaa
gtcttctatcactcctgcaagttcctcatgactcaggagaagtcaagtgccgtcgctcct
ctgttccgagggttcatcttgtcgctctgcgaggacgaacagagtcagaagaaacctgtg
gatgttctccgtcacatccttggttttcccagcgaggagcttctgagaagtcccattgtc
aaaaaggatcttcaggagcaactcaaccagcagacgccctacctgcacctcattcactgt
cgctggcagtggctgcacggttctgtggagcagacgatggacgccttcgagagagcgctg
ggatcccccctgcagctggaggagctgcacaccctgtggctggattacctgatgttcagc
tgcagtcagcagagctgtgctccatccagacaattctcacatctggtgcaccgctgtctg
agcaccgtcccctctcgactggagcttcccttcaacccagcagagttctggaactgctac
cgcttccacaaccaggtggtgactctttatctgaaccgtctgccacagtcccagcatgca
cctgtgctggagagactgagatacgccatgcccaccaacactgaactgagcctaaggttg
ctgtttgtcgagtggcaggatggaaacattgaacatgtgaagtttcagactcggatgttg
acgagtaactttccaaagagtttaacgcactggaaaatagcgatcgccatggagacggag
ctccaggagtcatgtgaggtgcgactcctctatcatcaggctcttcagaaccttcctctc
tgtgccgccctgtggaaacatcgcctgctgtttgaggcggctcagggcgccgcctcttct
aggttaaagagactcgtcgaccgctgtggtcaagtgggcgtgagtttagttgtgggtcaa
gcgcagggaggagatcagtga
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