Hippoglossus stenolepis (Pacific halibut): 118116638
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Entry
118116638 CDS
T08308
Name
(RefSeq) LOW QUALITY PROTEIN: uncharacterized protein LOC118116638
KO
K12012
tripartite motif-containing protein 35
Organism
hsp
Hippoglossus stenolepis (Pacific halibut)
Brite
KEGG Orthology (KO) [BR:
hsp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
hsp04121
]
118116638
Ubiquitin system [BR:
hsp04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
118116638
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRY
SPRY
zf-RING_UBOX
zf-C3HC4
zf-C3HC4_4
zf-B_box
zf-C3HC4_2
zf-C3HC4_3
U-box
zf-RING_2
zf-RING_6
zf-RING_5
DUF4618
Prok-RING_4
zf-Nse
Aquarius_N_2nd
zf-ANAPC11
zf-rbx1
PEHE
TRAF3_RING
SidF
DUF4200
Motif
Other DBs
NCBI-GeneID:
118116638
NCBI-ProteinID:
XP_047197634
LinkDB
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Position
10:complement(1598690..1606281)
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AA seq
916 aa
AA seq
DB search
MASRSEEDLCCPVCHDVFRDPVLLSCSHSFCRDCVKSWWKDKEVKECPLCKRRSSKSQPP
CNLVLKNLCETFLQERDQSSSHALCSQHSEKLRLFCLDHQQPVCLVCRDSEKHSDHRFRP
IDEAAQQHKKQLQETLEPLKKKLQCFERVKVEFELTAEHIKVQAGLTETQIKEQFKKLHQ
FLEEEEEARMAALREEEEQKSRMMKEKIESLSRDITALSDTIRTTEDELRAEDVSFLLNY
KAAVERVQQRPLLDDPQLASGALIDKAKHLGNLSFNIWNKMKDMVSYSPVVLDPNSAHPE
LVLSEDLTSLRRGEKQKLPDNPERFDYYLSVLGSEGFNSGTHSWDVLVRDSTDWAMGVSA
EPLQRKGDKLSGTWGIWFHEGKYSASSPSGLSVLSVQKIQRIRVKLDWNRGELSFSDLDT
NKHIHTFTHTFTQKMFPYFNTGDHLKLLPVNVSVMLDQMASRSEEDLCCAVCHDVFRDPV
ILSCSHSFCEDCVKSWWKDKEVKECPLCKRRSSKSEPPCNLALKNLCETFLQERDQSSSH
ALCSQHSEKLRLFCLDHQQPVCLVCRDSEKHSDHRFRPIDEAAQQHKKQLQETLEPLKKK
LQCFERVKVKFEQTAEHIKVQAGLTETQIKEQFKKLHQFLEEEEEARMAALREEEEQKSR
MMKEKIESLSRDITALSDTIRTTEDELRAEDVSFLLNYKAAVERVQQRPLLDDPQLASGA
LIDEAKHLGNLSFNIWNKMKDMVSYSPVVLDPNSAHPELVLSEDLTSLRRGEKQKLPDNP
ERFDYYLSVLGSEGFNSGTHSWDVLVRDSTDWAMGVSEESVQRKGNKLSGTWXIWFDEGK
YSASSPSASSDLSVQKIQRIRVKLDWNRGELSFSDLDTNKHIHTFTHTFTQKMFPYFNTG
DHLKLLPVNVSVMLDQ
NT seq
2748 nt
NT seq
+upstream
nt +downstream
nt
atggcttccagatcagaagaggatctctgctgtcccgtctgccatgatgtcttcagagat
cctgtccttctgtcatgtagccacagcttctgtagagactgtgtgaagagctggtggaaa
gacaaagaagtaaaagagtgtccactttgtaagagaagatcttcaaagtcacaaccacct
tgtaacctggtgttgaagaacctgtgtgagaccttcttacaggagagagatcagagctct
tcacatgctctctgcagtcagcactcagagaaactcagactcttctgtctggaccatcag
cagccagtgtgtctcgtctgcagagattcagagaaacacagcgaccacagattcagaccc
atcgatgaagctgcacaacaacacaagaagcagcttcaggaaactctggagcccttgaag
aagaagttacagtgttttgaacgtgttaaagtagagtttgaactaacagcagaacacatt
aaggtccaggccggactcacagagacgcagatcaaggagcagtttaaaaagcttcatcag
tttctggaggaggaagaggaggccaggatggctgcactgagggaggaagaggagcagaag
agtcggatgatgaaggagaagattgagtctctgagcagagacataacggctctttcagac
acaatcagaaccacagaggacgagctgagagctgaagacgtctcgttcctgctcaactac
aaggctgcagtggaacgagtccagcagcgccccctgctggatgatccacagctggcctca
ggagctctgatagacaaggccaaacatctgggcaacctgagcttcaacatctggaacaag
atgaaggacatggtctcctacagtcctgtggttctggacccaaactctgctcatccagaa
ctcgtcctgtctgaagatctgaccagtttgagacgaggagagaaacagaagcttcctgac
aatccagagaggtttgattattacctctcagtcctgggatctgagggttttaactcaggg
actcacagctgggacgtcctggttagagacagtactgactgggcaatgggtgtgtcagca
gagcctctccagaggaagggagacaaactgtctggaacatggggaatatggttccatgaa
ggtaaatactcagcatcgtcaccatcaggattatctgttctctctgtgcagaagatccag
aggatcagagtgaaactggactggaacagaggagaactgtcgttctctgatcttgatact
aacaaacacattcacaccttcacacacactttcactcagaagatgtttccatactttaac
actggagatcacttgaagctgttacctgtgaatgtctctgtgatgctggatcagatggct
tccagatcagaagaggatctctgctgtgccgtctgccatgatgtcttcagagatcctgtc
attctgtcatgtagccacagcttctgtgaagactgtgtgaagagctggtggaaagacaaa
gaagtaaaagagtgtccactttgtaagagaagatcttcaaagtcagaaccaccttgtaac
ctggcgttaaagaacctgtgtgagaccttcttacaggagagagatcagagctcttcacat
gctctctgcagtcagcactcagagaaactcagactcttctgtctggaccatcagcagcca
gtgtgtctcgtctgcagagattcagagaaacacagcgaccacagattcagacccatcgat
gaagctgcacaacaacacaagaagcagcttcaggaaactctggagcccttgaagaagaag
ttacagtgttttgaacgtgttaaagtaaagtttgaacaaacagcagaacacattaaggtc
caggccggactcacagagacgcagatcaaggagcagtttaaaaagcttcatcagtttctg
gaggaggaagaggaggccaggatggctgcactgagggaggaagaggagcagaagagtcgg
atgatgaaggagaagattgagtctctgagcagagacataacggctctttcagacacaatc
agaaccacagaggacgagctgagagctgaagacgtctcgttcctgctcaactacaaggct
gcagtggaacgagtccagcagcgccccctgctggatgatccacagctggcctcaggagct
ctgatagacgaggccaaacatctgggcaacctgagcttcaacatctggaacaagatgaag
gacatggtctcctacagtcctgtggttctggacccaaactctgctcatccagaactcgtc
ctgtctgaagatctgaccagtttgagacgaggagagaaacagaagcttcctgacaatcca
gagaggtttgattattacctctcagtcctgggatctgagggttttaactcagggactcac
agctgggacgtcctggttagagacagtactgactgggcaatgggtgtgtcagaagagtct
gtccagaggaagggaaacaaactgtctggaacatggnggatatggttcgatgaaggtaaa
tactcagcatcgtcaccatcagcatcatctgatctctctgtgcagaagatccagaggatc
agagtgaaactggactggaacagaggagaactgtcgttctctgatcttgatactaacaaa
cacattcacaccttcacacacactttcactcagaagatgtttccatactttaacactgga
gatcacttgaagctgttacctgtgaatgtctctgtgatgctggatcag
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