Hippoglossus stenolepis (Pacific halibut): 118120766
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Entry
118120766 CDS
T08308
Symbol
cachd1
Name
(RefSeq) LOW QUALITY PROTEIN: VWFA and cache domain-containing protein 1
Organism
hsp
Hippoglossus stenolepis (Pacific halibut)
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Gene cluster
GFIT
Motif
Pfam:
dCache_1
VWA_N
VWA_2
DUF6744
VWA
Motif
Other DBs
NCBI-GeneID:
118120766
NCBI-ProteinID:
XP_035031913
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Position
14:6911543..6989875
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AA seq
1317 aa
AA seq
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MRGPSATMARRTAGGPVALTPSGRAAFRDKHRRFRGGSLALSWGFVLMCSAALSCGYCGA
DTEFSILEEAQVLADQMKKLSSQELGVFTMQRIFSSFTYTEKTSNGETEVQQLAKKIREK
FNRYLDVVNRNKQVVEASYTAHLTSPLTAIQDCCSIPASMMDFDGNFNTNVSKTICCDRL
SPTVNSRAFNPGRDLNSVLADNLKSNPGIKWQYFSSEEGIFTVFPAHKFHCKGNFEHRSR
PVYVSAVRPQSKHIVVMVDHGASVTETQLQIARDSALVILNAIDEHDKISILSVAEAVRS
CALDQCYKSLLSPATSETKRKMSTFISNIKASDAATHHAGGFQKAFQLLRNTTSLSRHSP
TTDMVIIYLSSGITTRESSEQEKRATLSVVREENRHLNNSVMILTYALMNEGVTGLKELA
FMRDLAEQNSVKYGVDRAGDRDRFSASSSGSSGSSMIPVVKGSMMVLNQLSNLETTVGRF
YINLPNRMIDLAGFSLPYSDPMGDGFIMTVSRPCYFGNLLLGVVGVDVNLAYILEDVTYY
QDSLASYTFLIDNKGYTLMHPSLTRPYLMTEPPLHTDITHYENIPRFHVVRQNILNLPLG
SQVIAVPVNSSLSWHTNRLRDNTKDAYNVSYAWKLVQDTSFILCIVYVQPEIPVKHLKNL
NTAPSSKLLYHRLDLLGQPSSCLHFKQLATVESPTVMLAAGSFSSPYEHLSQPETKRMVE
HYTAYLSDNTRLIANPGLKSSVRNEVMATSHVTDEWMTLMEMSSLNCYIVRRYIATPSGV
LRIXPGSLMDKAFDPTRRQWYQHAVANPGLITFTGPYLDVGGAGYVVTISHTLHASSTQT
APGYAIAVMGIDFTLRYFYKVLLDLLPICNQDKGNKIRCFIMEDRGYLVAHPTLIDPKGH
APAEQQHITHKEPLVANDILNHPNFVKKNLCNSFSDRTVQRFYKFNTSIVGDLTNLVHGS
HCSKYRLTRIPGTNAFAGIVNETCDSLAFCACSTVDRLCLNCHRMEQNECECPCECPLEV
NECTGNLTNAENRNPSCEVHQEPVSLNVIDPSLHETLPQCINTRCSQRYTSSDCFGVLDC
EWCMVDSDGKTHLDKPYCALQKECFGGIVGAKSPYADGLGVLDEEVASLNMIKSAPVGPV
AGGIMGCIMVLVLAVYAYRHQIHRRSHQHMSPLAAQEMSVRMSNLDNERDERDEDSHEDR
GIISNTRFIAAVIERHTHTPERRRRYWGRSGTESDHGYSTMSPQEDSENPPGNNDPLSAG
VDVGNHDDDMDLDTPPQTAALLSHKFHPYRHTHTHHHPLHTHHLQAAVTVHSVDAEC
NT seq
3954 nt
NT seq
+upstream
nt +downstream
nt
atgcgcggaccctcggccaccatggcgcggcggacagcggggggacccgtggctttgacg
ccgagcgggcgcgctgctttccgggataagcaccgtcggtttcgcgggggctcgctggcg
ctttcgtggggcttcgtgttaatgtgctcggcggcgctttcttgtggatactgcggagcc
gacacggagttttccatcctggaggaagcgcaagttctggcggatcagatgaagaagctc
tcctcgcaggagctgggagtcttcacgatgcagaggatcttcagctcgtttacgtacacg
gagaagacatcaaacggagagacagaagtgcagcagttggccaagaagattcgggagaag
tttaaccgctacctggatgtggtgaacaggaacaagcaggtggtggaggcgtcgtacacc
gcccacctcacgtctccgctcactgcgatacaggactgctgctccataccagcatcgatg
atggacttcgacggaaacttcaacaccaacgtctccaagaccatctgctgcgatagactt
tcccccaccgtcaacagccgggcgttcaacccaggacgggacctcaactcagtgttggca
gacaacctgaagtccaacccggggataaagtggcagtacttcagctcagaggagggcatc
ttcaccgtcttccctgcccacaagttccactgcaaaggaaacttcgagcaccgcagcagg
cctgtgtacgtgtctgcagtgcgtccccagtctaagcacatcgtggtgatggtcgaccac
ggagcatctgtcaccgaaacgcagcttcagatcgcgagggactcggcgctcgtcatccta
aacgccatagacgagcacgacaagatctccattctctcagtggcagaggcggttcgttcc
tgtgctctggaccagtgctataagagtctgctgtcaccggccaccagcgagaccaagagg
aagatgagcaccttcatctccaacatcaaggcttcagatgcggccacgcaccacgccggg
ggcttccagaaggctttccagctgctgagaaacaccaccagcctcagcaggcatagtccc
acgacagacatggtgatcatctacctgtcgtccggtatcacgacccgggagtcgtcggag
caggagaagcgagcgacgctcagcgtggtcagagaggagaaccgccacctcaacaactcc
gtcatgatcctcacctacgctctcatgaacgagggagtaacgggcctgaaggagttggcc
ttcatgagggacctcgcggagcagaattctgtgaagtacggcgtggacagagcaggagac
cgggaccgcttctctgcgtcgtcgtctgggtcgtctggatcttcgatgataccggtggtg
aaggggagcatgatggttctcaaccagctgagcaacctggagacgacagtgggccgcttc
tacatcaacctccccaatcgtatgatcgacctggccggcttcagcctgccctactccgac
cccatgggagacggatttatcatgactgtgagccgaccgtgctactttgggaacctgctg
ctcggcgtggtcggggtggatgtgaacctggcctacatcttggaggatgtcacctactac
caagactcgctggcctcatacaccttcctcatcgacaacaaaggctacaccctgatgcac
ccgtcactgacgcggccctacctcatgacggagccgcccctgcacacagacatcacccac
tacgagaacatcccccgattccacgtggtccggcagaacatcctcaacctccctctgggc
agtcaggtcatcgccgttccggtcaactcgtctctgtcgtggcacaccaaccgactccgg
gacaacaccaaagacgcgtacaatgtcagctacgcctggaaactggtccaggacacgtcg
ttcatcctgtgcatcgtgtacgtgcagcctgagatcccggtgaagcacctgaagaacctg
aacacggctcccagctcgaagctgctctaccaccgcttggacctgctgggtcaacccagc
tcctgcctgcacttcaaacagctcgccactgtcgaatcccccacagtgatgttggcagcc
ggcagcttctcctccccctacgagcacctcagtcagccagaaaccaagcgcatggtggag
cactacaccgcctacctgagcgataacaccaggctcatagccaacccaggcctcaagtcc
tctgtcaggaacgaggttatggcgaccagtcacgtcacggatgagtggatgacactaatg
gaaatgagtagcctcaactgctacattgtgcgccgttacatagcaacccccagtggggtg
ctccggattntaccgggatcactgatggacaaagccttcgacccgacccgcagacaatgg
taccagcatgctgtggccaaccctggactcatcaccttcacggggccatacctggacgtg
ggcggggccggatacgtcgtcacaatcagccacaccctccacgcgtctagcactcagacg
gcccctggttacgcaatagccgtgatgggcatagacttcaccctgcgctacttctacaaa
gtcttgctcgacctgctgcccatctgcaaccaggacaagggcaacaagatccggtgcttc
ataatggaggacagagggtacctggttgcacaccccactctcattgaccccaaaggtcat
gcccctgcagagcagcagcacatcacgcacaaggagccgctggttgcgaacgacatcctc
aaccatcccaattttgtcaagaagaatctgtgcaacagcttcagcgaccgcacggtgcag
cgcttctacaagttcaacaccagcatcgtgggggacctcaccaacctggtccatggaagc
cattgttcaaagtaccgcctgacccggatcccaggcaccaacgccttcgccggtatcgtc
aacgagacgtgtgactccctggcgttctgcgcctgcagcaccgtggaccgactctgcctc
aactgccacagaatggagcagaatgagtgcgagtgtccctgtgagtgccccctagaggtc
aacgagtgcacaggcaacctcaccaatgctgagaacaggaacccgagctgcgaggtgcac
caggagccggtcagtctgaatgtgattgatcccagtctgcatgagaccctgccccagtgc
atcaacacccgctgtagccagagatacaccagcagcgactgttttggcgtgttggactgt
gagtggtgcatggtggacagtgatggtaagacccacctggacaagccgtactgcgccctg
cagaaggagtgcttcggaggcatcgtcggtgccaagagtccctacgcggacggcctggga
gtcctggatgaagaggtggcgtctctgaacatgatcaagagcgcccccgtgggtccggtc
gctgggggcattatgggatgcatcatggtgttggtgctggctgtgtatgcgtacagacac
cagatccacaggcgctctcaccagcacatgtcaccactggctgcacaggaaatgtcagtg
agaatgtcgaacctggataatgaacgagatgagagggacgaagacagccacgaggacaga
ggcatcatcagcaacacgagattcatagctgcggtgatcgagagacacacgcacactccc
gagcggaggcgacggtactggggacgatccgggacagagagcgaccacggttacagcacc
atgagtccgcaggaggacagcgagaatccgcccggaaacaacgacccgctctcggccggc
gtggacgtgggtaaccatgatgacgacatggacctggacacgccgccccaaacggcagcg
ctgctcagccacaagttccacccctaccggcacacgcacacgcaccaccacccgctgcac
acgcaccacctgcaggccgcggtcaccgtgcacagtgtggacgcagagtgctga
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