Hippoglossus stenolepis (Pacific halibut): 118123449
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Entry
118123449 CDS
T08308
Symbol
caskin1
Name
(RefSeq) caskin-1 isoform X2
KO
K21952
CASK-interacting protein
Organism
hsp
Hippoglossus stenolepis (Pacific halibut)
Brite
KEGG Orthology (KO) [BR:
hsp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
hsp04131
]
118123449 (caskin1)
Membrane trafficking [BR:
hsp04131
]
Exocytosis
Calcium ion-dependent exocytosis
Kinases and associated proteins
118123449 (caskin1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ank_2
Ank
Ank_4
SAM_1
Ank_5
Caskin1-CID
SAM_2
Ank_3
Caskin-Pro-rich
Caskin-tail
SH3_2
SH3_1
SH3_9
Motif
Other DBs
NCBI-GeneID:
118123449
NCBI-ProteinID:
XP_035036732
LinkDB
All DBs
Position
16:1574533..1637200
Genome browser
AA seq
1679 aa
AA seq
DB search
MGKDQELLQAVKTEDLLTVQKLLQRPRPGKAKLLGSAKKVNVNFQDTDGFSPLHHAALNG
NLELISLLLESQAAVDIRDQKGMRPLHYAAWQGKAEPMKMLLKSGSSVNGQSDEGQIPLH
LSAQHGHYDVSEMLLQHQSNPCIVDNAGKTPLDLACEFGRVGVVQLLLSSNMCAALLEPK
KGDTTDPNGTSPLHLAAKNGHIDIIRLLIQAGIDINRQTKAGTALHEAALCGKTDAVRLL
LDSGINATVRNTYSQTALDIVYQFSATQASREIKQLLRDASAALQVRALKDYCNNYDLTS
LNIKAGDVITVLEQHPDGRWKGCIHDNRTGNDRVGYFPSTMVEVISKRTGLASTVICTQQ
FQKIPLVPPATVAPANAVVNGNDTTFHQIHILPPPPPPPPHSHQPLLPLFTSFGYSRSPV
TTPQGDTPTAPGCRGSEASPHSSPTSSGGPHGGSNEEIWVLRKPVAGGDRSSVGSSGSVT
SVRSSGSGQSAGSTSHILHPQAEGVKLLATVLSQSAKAKEHLLEQSKSVDQPAGSASSSR
TSSQSGCPLHEAPPYDATATRKGEVPVEGKSSEAVVQWLSDFQLQVYAPNFVGAGYDLPT
ISRMTPEDLTAIGITKPGHRKKMTSEINKLSITEWLPDQKPANLGEWLSAIGLNQYHQVL
VQNGYENIDFITDITWEDLQEIGVTKLGHQKKLMLAVKRLAEMQRGSEGRGSLRKKPTPI
TQQQEVMSIDSPPPEELMSPKMSTFQDSELSTELQSAMTQPGQEVKAQRTRSVSKDHDEV
TAGGGGGGTGPPKKEARTMRQQSSQGSTSSHRGSVSSQGKHRHSHSHSQPAPPYTPPHTP
TKSRTSSSSSTSSVQSTASSQSKTKPQYIHGERPHSPRSHPPQSPTHRGAPGPQPQQQQQ
QQQQQPAVQPPHQAQPQPQPQPHPQTQGMEVREIQQPQVPLLCLPPEAELAEGEGAEPSA
LQKKRAHSLNRYAVSDGECDDRAGRGGGEGEAEVIVSQSSKVIRAEGVKYATVTPRVSRS
HSVRNQDKNGNRNHTQTLALRQKKKGPPPPPPKRSSSAISSSNSNLSDANAQPPTLTTTG
GMLDVPYHQQRRASDLGVSVEPSAVETNSMGSVRSIAAMLEMSSIGGGAKGMAIQKNFLQ
VGKTTRDTIGLDGEVVNRRRTISGPVTELVAAARRNQPTPSALPCPALQPEPESAAPTVN
SSSPHPPSSPHPSSGGSGSSSENLPFAEEGSLTIRRQGRGEGEGQCVFCVCLQGDGEGSP
QGDGGYAQEDIAGVEATATFKRRARGTKPHPNGSDFTLQESSTVKRRPKSRDKEPEGYAE
LAAANGEPVETGSPNTSQPVPYQNGTATMKRRPVPGGQDAGVTEQPQPHPQPQPNHQPQP
QPHHQPHHQPQPQPQPNHQPQPQPQPQPQPQPQVTAAPRRDSVDQAAPVVNEVVLQRKPK
PPVSPKPVVGQMKRGPQTPPHPANKRVPLPGPGTPGSPVEGKKIPPPVSPKPLPPPTAPK
PSKLIHSMTSPPSPNPFPAPVKLHSVVTRQNTSPPSFPSSNTPSPPNAKPTSPSPQSPHT
PQTPTTPQTPQTPATPSPTPPPVKPPRSSIGGVSVDSGMVGGGVTAPAAATSPDFCVDSL
VHQKLEETSASLAAALRAVEDKILRQEDSVAEQKTTVSILDDIGSMFDDLADQLDAMLE
NT seq
5040 nt
NT seq
+upstream
nt +downstream
nt
atggggaaggaccaggagctgctgcaggcggtgaagaccgaggacctgctcaccgtgcag
aagctgctgcagaggccccggcctgggaaagcaaagcttctcggttctgcaaagaaagtc
aacgtcaacttccaggacacagacgggttttctccgctgcatcatgcggccctcaatggg
aacctggagctcatctctctgctgctggagtctcaggctgctgtcgacatcagagaccag
aaaggtatgcggcctctgcattacgcagcctggcaggggaaggcggagcccatgaagatg
ctgctgaaatctggttcgtccgtcaacggccaatcggatgaaggacagatccctctgcac
ctgtcagcgcagcacggccactacgacgtgtctgagatgctgctgcagcaccagtccaac
ccgtgcatcgtggacaatgcagggaaaacccctctggacctggcctgcgagttcggccga
gtcggggtggtccagttgttgctctccagtaacatgtgtgctgctttgctggagcccaaa
aaaggagacaccaccgaccccaacgggacgtctcctctccacttggccgccaagaacgga
cacatagacattatcagactgctgatccaggcaggtatcgacatcaacagacagaccaaa
gctggcaccgctctgcatgaagctgctctctgcggcaagaccgatgccgtgagactcctg
ctggacagcggtatcaatgccacagtgaggaacacgtacagccagactgcgctggatatc
gtttaccagttcagtgccacgcaagccagcagagagatcaagcaactgctaagagatgcg
tcagcggctcttcaagttcgagctctgaaagattactgcaacaactacgacctgaccagc
ctgaatatcaaagcaggagatgttattacggttctggagcagcaccccgatggacgctgg
aaaggctgtatccatgacaaccgcacaggaaatgatcgggtgggctacttcccgtccacc
atggtggaagtcatcagcaaacgcacaggtttggccagcacagtcatttgcactcaacag
tttcaaaagataccgctggttcccccggcgacggttgcccctgccaacgcggtagtcaac
ggcaacgacaccacgttccatcagatccatatcctgcctccaccgcctcctcctccacca
cattcccatcagccactgcttccactttttacttcctttggctatagcaggtcgcccgtg
acaaccccacagggagacacacccactgccccaggttgtcgcggttcagaggcaagtcct
cacagctctcctacctcgtccggcgggccccatggaggctccaatgaagagatctgggta
ctgcgcaagccagtggcaggtggcgaccgcagcagtgtgggcagctctggcagtgtcacg
agcgtgaggtcatcaggcagcggtcagagcgccggcagcacctcacacatcctccaccca
caggctgaaggggttaagcttctcgccacggtcttgtcccagtcggccaaagctaaggag
catctcctggagcagtccaagtccgtggaccaacctgcaggttctgccagctcctcccgg
acatcgagccaatcggggtgtccgctccacgaagcgccgccttatgacgccacggcaacc
aggaagggggaggtgccagtcgaggggaagagctcagaggccgttgtccaatggctgagc
gactttcagctgcaggtctacgctccgaacttcgtgggcgctgggtatgacttgcccacc
attagccgaatgaccccagaggatctgactgcgattggaataaccaaaccaggtcacagg
aagaaaatgacctcagagataaacaagctgagcatcacagagtggcttcctgatcagaaa
cctgccaatctaggagagtggctgtctgccattggtctaaaccagtaccaccaggtgtta
gtgcagaacggctacgagaacatcgacttcatcactgacatcacttgggaggacctgcag
gaaataggcgtcaccaaactgggccaccagaagaagctgatgctggcggtgaagcgactg
gcggagatgcagcgcggatcagaaggccggggctccctccgaaagaagcccacaccaatc
acacagcagcaggaagtcatgtccatcgacagcccgcctccagaggagctcatgtctcca
aagatgagcaccttccaggacagcgagttgagcaccgagctgcagagtgcgatgacgcag
ccaggtcaggaggtcaaagctcaacggacacgcagcgtcagtaaagaccatgatgaggtg
acggcaggaggtgggggaggaggtactggcccgcctaagaaggaggcacggactatgagg
cagcagagtagccagggaagcacctcctcccacaggggcagcgtctcctctcaaggcaaa
caccgccactcccactcccactcccagccggcccctccctacacgccgcctcacactcct
accaagtctagaacctcatcgtcctcctccacttcctccgtccagagcacagcttcctcg
cagtccaaaaccaaacctcagtacatccatggagagagacctcattctccgcgctcacac
ccccctcaatctccgacccaccgtggcgctccaggtcctcagcctcagcagcagcagcag
cagcagcagcagcaacctgcagtccagccaccgcaccaggcacaacctcaacctcaacct
caacctcacccgcagacgcaggggatggaggtcagggagatccaacaaccacaggtccct
ctcctctgcctcccaccagaggctgagctggctgagggagaaggagcagaaccctcggcg
ctccagaagaaacgtgctcacagtctcaaccgatacgccgtgtcagatggcgagtgtgat
gaccgggcaggacgaggaggaggtgaaggagaagcggaggtaattgtaagtcagagctca
aaggtcatcagagcggaaggagttaaatatgccacagtgaccccccgcgtcagtcgcagc
cactccgtccgcaaccaggacaagaacggcaaccgcaaccacacgcagaccttggctctg
cgtcagaagaagaaaggcccacccccgcccccgcccaagcgctccagctcagccatctcc
agctccaactccaacctgtcagatgccaacgcacagccgcccacactcaccacgacaggg
gggatgctggatgtgccttaccaccaacagcggcgagccagcgatcttggggtgtctgtg
gaacccagtgctgtggagacgaacagcatgggcagtgtgaggagcatcgctgccatgttg
gaaatgtcttctatagggggaggagccaaaggcatggcgatacagaagaatttcctgcag
gtgggaaaaacgacacgtgacaccattggcctggacggcgaagtggtgaatcgacggcgg
accatcagtggccccgtcaccgagttggtggcggctgccaggcgcaaccagccgactccc
tccgctcttccatgtcccgccttacaacctgaacctgaaagcgccgctcccactgtaaat
tcgtcctcaccacaccctccgtcctccccccatccgagttctggaggcagcggcagctcg
tcagagaatctgccatttgcagaggagggaagtctcactattcgccgccagggtcgagga
gaaggagaaggacagtgtgtattttgtgtttgtctgcagggcgacggcgagggaagtccc
cagggagacggtggctacgcccaggaggacatcgccggcgttgaggccacggcaaccttt
aagcgacgagcgcgcggcaccaagccccaccccaacggctccgacttcaccctccaggag
tcgtccaccgtcaaacggagacccaagagccgcgacaaggagcccgaaggctacgcagag
ctggctgccgctaatggagagcctgtggaaactgggtcgccgaacacctcgcagccagta
ccttaccagaacggcactgccaccatgaaacgccgcccggttcccggtggccaggatgct
ggagtgacggagcaaccccaaccccatcctcaacctcaacccaaccatcaacctcaacct
caaccgcatcatcaaccccatcatcaaccccaacctcaacctcaacccaaccatcaaccc
caaccccaacctcaaccccaaccccaacctcaaccgcaagtgactgctgctcctcgcagg
gacagtgtggatcaagcagctccagtggtcaacgaagttgttctgcagagaaaaccgaag
ccgccagtctcccccaagccggtagtggggcagatgaagagaggaccacagacgccccca
catcctgccaacaagagggtcccgctgccaggccctggcacacctggaagcccagtggaa
ggaaagaagattcctccaccggtctcgccgaaaccattgcccccgcccacggcgcccaaa
ccgtccaagctcatccactccatgaccagccccccctccccgaacccattcccagcccca
gtcaagctgcactctgtggtgacccggcagaacacgtcgcccccgtccttcccttcctca
aacacccccagccctccgaacgccaaaccgacgagcccttctccccagagtccccacacg
ccgcagacccccaccacgccccagactccccagactccggctactcccagccccaccccg
ccgcccgtcaagccccctcggtcctccatcgggggggtgtctgtggacagtgggatggtc
ggcggtggggtgacggcaccggctgctgcgacatcaccagacttctgtgtggattctctg
gtgcatcagaagctggaggagaccagtgcgtcgctggccgcggctctgcgggcggtggag
gataagatactgcggcaggaggactctgtggctgagcagaagaccacagtcagtatcctg
gacgacatcggcagcatgttcgatgacctggccgaccagctggacgccatgttggagtaa
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integrated database retrieval system
