KEGG   Hibiscus syriacus (Rose-of-Sharon): 120159922
Entry
120159922         CDS       T09559                                 
Name
(RefSeq) LOW QUALITY PROTEIN: histone deacetylase 9-like
  KO
K06067  histone deacetylase 1/2 [EC:3.5.1.98]
Organism
hsyr  Hibiscus syriacus (Rose-of-Sharon)
Pathway
hsyr03082  ATP-dependent chromatin remodeling
hsyr03083  Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:hsyr00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    120159922
   03083 Polycomb repressive complex
    120159922
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:hsyr03036]
    120159922
Enzymes [BR:hsyr01000]
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.1  In linear amides
    3.5.1.98  histone deacetylase
     120159922
Chromosome and associated proteins [BR:hsyr03036]
 Eukaryotic type
  Histone modification proteins
   HDACs (histone deacetylases)
    Class I HDACs
     120159922
   HDAC complexes
    Sin3A-HDAC complex
     120159922
    BRAF-HDAC complex
     120159922
    REST complex
     120159922
    SHIP complex
     120159922
    MiDAC complex
     120159922
   Polycomb repressive complex (PRC) and associated proteins
    Noncanonical PRC1 (PRC1.6)
     120159922
  Heterochromatin formation proteins
   Other heterochromatin formation proteins
    120159922
  Chromatin remodeling factors
   NuRD complex
    120159922
SSDB
Motif
Pfam: Hist_deacetyl
Other DBs
NCBI-GeneID: 120159922
NCBI-ProteinID: XP_039026354
LinkDB
Position
Unknown
AA seq 429 aa
MRSKGKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLAYDLHKKMEIFHPHKAYPVEL
AQFHSADYVEFLHRITPDTLHLFSNELVKYNLGEDCPVFENLFEFCQIYAGGTIDAARRL
NNQLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVE
EAFYFTDRVMTVSFHKYGDMFFPGTGDVKDIGEREGKFYAINVPLKDGIDDTSFNRLFKT
IISKVVEMYQPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRIVKKFNLPLLVTGGGGY
TKENVARCWTFETGVLLDTELPNEIPENEYIKYFAPECLLNIPNGHIENLNSKSYLSTIK
VQVLENLRCIQHAPGVQMQEVPPDFYIPDFDEDEQNPDERMDQHAQDKQIQRDDEYYDGD
NDNDHHTSM
NT seq 1290 nt   +upstreamnt  +downstreamnt
atgcgttcaaagggcaaaatatcctacttttacgacggtgatgtagggagcgtttacttt
ggtcctaatcatccaatgaaaccgcaccggctttgtatgactcaccatttggtccttgcc
tatgacctccataaaaaaatggaaatttttcatccccacaaggcttaccccgttgaacta
gctcagttccattctgctgattatgttgagtttttacatcgaattactccagatacgctg
catctgttctcgaatgaattggtcaaatacaatcttggagaagactgccctgtctttgaa
aacctgtttgaattttgtcaaatttatgctggtggcacaatagatgctgcacgaagatta
aacaatcaactatgtgatattgctataaattgggctggtggtttacatcatgccaagaaa
tgcgaggcatctggcttttgttacatcaatgacttggttttgggaatcttggagcttctg
aagtatcatgcccgtgttctgtatattgacatagatgtacatcatggcgatggcgttgaa
gaagccttttatttcactgacagggtgatgacagttagttttcacaagtacggagatatg
ttctttcctggaactggtgatgtgaaggatataggagaaagagaaggcaagttctatgcc
ataaatgtcccactcaaggatgggattgatgacaccagcttcaatagattgtttaagaca
attatttccaaggttgttgaaatgtatcaaccaggtgcaatagttcttcaatgtggggca
gattctcttgccggggatcgcttgggctgtttcaacctctcgattgatggacatgctgag
tgtgttagaattgtgaagaaattcaacctacctttactggttactggaggtggaggatac
acaaaagaaaatgttgcacgttgttggacttttgaaacaggagttcttttagatacagaa
cttcctaatgaaatcccagaaaatgagtatatcaaatattttgcaccagagtgtttgttg
aatattccaaatgggcacatagagaacttaaatagcaaatcatatcttagtacaatcaag
gtgcaagtgttggaaaatcttcgttgcatccaacatgctccgggtgtacagatgcaagag
gttccacccgatttctatattcctgattttgatgaagatgagcaaaatcctgatgagcgc
atggaccagcacgctcaagacaagcaaattcagcgcgatgatgaatactacgatggtgac
aacgataatgatcatcacacgtccatgtga

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