Hibiscus syriacus (Rose-of-Sharon): 120178114
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Entry
120178114 CDS
T09559
Name
(RefSeq) zinc finger CCCH domain-containing protein 19-like isoform X1
Organism
hsyr
Hibiscus syriacus (Rose-of-Sharon)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Plus-3
GYF
SWIB
zf-HC5HC2H
GYF_2
zf-CCCH
zf_CCCH_4
Torus
Motif
Other DBs
NCBI-GeneID:
120178114
NCBI-ProteinID:
XP_039039989
LinkDB
All DBs
Position
Unknown
AA seq
1723 aa
AA seq
DB search
MDTEEEEPHHVPNVDSSVQFDDYQMTTATYSELQNQNTESRSELESATTAASPVDGKEEE
DEGKGADVEVAVGDEKGGGDLIVGEEKHEIGAVVELKSSSPVDGNNEDGDGGDSRMEGEK
AELVEDVGLDDVMDKVEDEANLSDERVTAGGIEVSVAEQEVVESAEEAGKSVEQKVADYV
NDRLDVPEEKELLDGVGERGTDDKAEVNGATEEIFVKEETTLAVEADDSTQQTLVKEETV
IMEKREVADVSVKSELLVDNEVDQSGIMDKTGVDDIAEESEFLEKPVADLAVPTEVAGET
GTHMVEKGVTLEEKRVNNVVEQTVILEDIHAVEEVSTDMAEPEEDPVMEKNMVNNVPGQT
ENMEDIHAVGAAGTEMDEAEEDPVMEEELDDEENTELGNIGDDVDEAEGTETEMTDTAEV
MEAADDTELPDMTEELETEAAELTEGTEEIEDSSKASGGKRKRGKNSSTKVLAKALSNKK
AEEDVCFICFDGGALVLCDRRGCPKAYHSACVGRDDAFFQSRGKWNCGWHLCSNCKKNAL
YMCYTCTFSLCKGCIKDAVILCVRGNKGFCESCMNLVMLIERKEQVNEEMAQINFDDRGS
WEYLFKDYWTDLKERLSITSDELALAKNPWKGAAKRESPNEHGLNDAGGSDSDNYSGNVE
VAVSKRRKTRSQSKARAREDDSPSIVAASDEGASTDENAEWASKELLEVVMNMRNGDKSV
LSRMELSQLILDYIQKYKLRDRRNKSYVICDAMLKNLFGKPRVGHIEMLNLLDPHIFFTK
EDSQTDDFQGSVVDAEANQVEADWNSGALTKTGKDKKRKTRKKGDGRGLQSNVEDYAAID
IHNINLIYLRRNLVEELLEDTETFHDKVVNSFVRIRISGASQKQDLYRLVQVVDTSKVAE
PYRVGKRTTDFLLEILNLNKTEAVSIDIISNQEFTEDECKRLRQSIKCGLINRLTLGDIQ
EKAMAIQAVRVKDWLESEITRLSHLRDRASDLGRRKELRECVEKLQVLKTPEELQRRLEE
FPEVHVDPNMDPSYESEEEKEDDKKQDNSLRPRGSGFSRRGREPISPRKGGYSSTDSWSG
NINYSSMNRELSRNVSGKGFTSKGDDSIGASEMGNENSWSLAREREAQQPNSWSKPKTAL
SSEIGTRNTHSIVIQEPSLKVASEISPAPPSTGVTSQINESEKMWHYQDPSGKIQGPFSI
VQLRKWSNTGYFPADLKIWRTNETQDDSILLNDALAGKFEKDPPLVDNSLPKDQMALYGN
PLGATLKQGMESQVGERSRLDQHHIAWSPQRVLGSPGQPAPSSLEIPKHSRVTWGSDTNL
PSPTPNRTPTGGNWGKPFENKWSPTPAQPSGSLPVANSVRGGAVGLQPPTVIPESGSAAA
PVVHSHTMVSSELHRRQVNASASVNLGVDIKNAAASVQNLVQSLSSHNPSAETHGPGSVS
VSRQESFSVSSIPAAGPQRCNASTQKLEPNPSLAIPAQLAPYGHWDGASQTGQFPAPFST
GNPAGVFPTPGQPSTMLSDSWRPAVPVQSNVQLPAPTNLPWCMAVADNQGATLRQAPGNQ
NPANMSYQGSASVNPLQNWAVPGQRQVPGNANPGWTGPGNTMQGWAPPGQGPNIVNNANP
VWLPPDQGAAPGSVNPGFAIPSRNTGGMWGNEPNHNGDKFPDQRDRSSLGGESGFSGAKP
WSRQSSFGGGGGSSRSSFKGQRVCKFHENGHCKKGASCDYMHT
NT seq
5172 nt
NT seq
+upstream
nt +downstream
nt
atggatactgaggaagaagagcctcaccacgtccccaatgtcgattcctccgttcaattt
gacgattaccagatgactacagccacgtactccgagttacagaatcaaaacactgagtca
cgttccgagctcgagtctgctacgacagcggcgtcccctgttgatggaaaggaagaggaa
gatgaggggaagggagctgatgtggaggtggcggttggtgatgaaaagggcggcggggat
ttgattgttggagaggagaagcatgagattggtgctgttgttgaactaaaaagttcgtct
ccggttgatggtaataacgaagatggtgatggaggggacagccgtatggaaggggagaaa
gctgaattggtggaggatgtgggattggatgatgtgatggacaaagtggaggatgaggct
aatttgtcggatgaaagagtaacagctggagggattgaggtttctgtggcggagcaagaa
gttgttgagtcggctgaggaagcgggtaaatcggtggagcaaaaggtagctgattatgta
aatgaccgactagatgttccagaggagaaagagttgcttgacggggtgggtgaaagaggg
actgacgataaggcagaggtgaatggtgcgacggaggaaatttttgttaaggaagaaaca
accttagcagtagaagcggatgattcaacacagcaaaccttggttaaggaggaaactgta
attatggagaaaagagaggtggctgatgtatctgtgaaaagtgaattactggttgataat
gaggtggatcaaagtgggattatggataaaactggggtggatgacattgctgaggaaagt
gaatttctggagaaacccgtggctgatcttgcagttccgactgaggttgcgggagaaact
ggtactcacatggttgagaaaggtgtaactttggaagaaaaaagggtaaataatgtggtt
gagcaaactgtaattttggaggatattcatgctgtagaggaagtaagtactgatatggcc
gagccagaggaggaccctgtgatggaaaaaaatatggtgaataatgtgcctgggcaaact
gaaaatatggaggatattcatgccgtaggggcagcaggtacggaaatggacgaggctgag
gaggaccctgtaatggaagaggaattggatgacgaagaaaatactgagttgggaaatata
ggagatgatgttgacgaagcagaggggactgagaccgagatgacagatactgcagaggta
atggaagcagcagatgatactgagttgccagacatgacggaagagttggaaactgaggca
gcagagctgacggagggcacggaggagatagaggatagcagtaaagctagtggtggcaag
aggaagcggggaaagaattcaagtactaaggttctggcaaaagctttatctaataagaag
gcagaagaggatgtctgtttcatatgctttgatggtggcgcccttgtgctttgtgaccgc
aggggttgcccaaaggcttaccattctgcttgtgttggtcgtgatgatgctttctttcaa
tcaaggggtaaatggaattgtggttggcatctttgtagcaactgcaagaagaatgccctt
tatatgtgttacacatgtaccttttccttatgcaagggatgcatcaaagatgctgtaatc
ctatgtgttaggggtaacaaaggcttctgtgagtcatgcatgaatcttgtcatgttgatt
gaaaggaaggagcaggtaaatgaagaaatggcacaaataaattttgatgaccgaggtagc
tgggaatatctattcaaggattattggactgatctaaaagagaggttatctataacttca
gatgaacttgctctggcaaaaaatccctggaaaggtgctgccaaacgggaatcacctaat
gaacatggtttgaatgatgctggaggatccgactccgataattattctgggaatgtggaa
gtagctgtttctaaacggagaaagactaggagtcaatcaaaggcacgcgcaagggaggat
gattcaccaagcattgtggcagctagtgatgaaggggcatctacagatgaaaatgctgag
tgggcatcaaaagagctcttggaagttgttatgaacatgagaaacggggacaaatctgtt
ttatctcgaatggagctcagtcaacttatattggactacattcaaaagtacaagcttcga
gatcgtcgcaataagtcttacgtcatttgtgacgcaatgcttaagaatctgtttgggaaa
ccgagagtggggcatattgaaatgttaaatcttctggatcctcacatatttttcaccaag
gaggattctcagacagatgatttccaagggagtgttgtcgatgctgaagctaatcaggtc
gaggctgattggaactctggtgctttgactaagactggaaaagataagaaacgtaaaacc
cgtaagaagggtgatggaaggggacttcaatcgaatgtggaggattatgctgccattgat
atacataatattaatctaatttatttgcgaagaaatttggtggaggaattgcttgaagat
actgaaacattccatgacaaggttgtcaattcttttgtgagaatacgaatatctggagct
agtcaaaagcaagatttgtataggctagtgcaagttgttgatacaagcaaagttgctgaa
ccatatagagttggcaaaagaacaactgattttctattagagattctaaatttgaataag
acggaggcagtatcgattgatattatatcaaatcaagagttcactgaggatgaatgcaag
cgtctgcgtcagagcatcaagtgtggacttatcaaccggctgactctgggagatatacag
gaaaaggccatggcaatccaggcagtcagagtcaaagattggttagaatcggagattaca
cgcctcagccatcttcgtgatcgagccagtgatttaggacgtagaaaggagcttagagaa
tgtgtagagaaactgcaggttttaaagacacctgaagagctacagcgtagattagaggag
tttcctgaggtacatgtagaccccaacatggatcctagttacgaatcagaagaagagaag
gaagatgataagaaacaagataattctttgaggccaagaggtagtggttttagcaggcga
ggcagagaaccaatttctccgcgaaaaggaggttacagttcaactgattcttggagtggg
aacataaattattctagcatgaatcgggaattaagcaggaacgtatctggtaaaggattt
acaagcaaaggggatgattctatcggagctagtgaaatgggaaatgaaaattcatggagt
cttgcacgggagcgagaagcacaacaaccaaacagttggagcaagccaaaaactgctttg
agttcagaaattgggacgaggaatacccactctattgtaatccaggaaccatctttgaag
gttgcatcagaaatttcccctgcacctccatccacgggagtaacaagccaaattaatgaa
tcagagaaaatgtggcattaccaggatccatctggtaaaattcaaggaccattttcgata
gtacaattgcggaagtggagtaacactggatatttccctgccgatttaaaaatatggaga
accaatgagacacaagatgattctatacttttgaatgatgccttggctggaaagtttgag
aaagaccctccattagtagataatagcctgccaaaggatcaaatggccttgtatgggaat
cctcttggagctaccttgaagcaaggaatggaaagccaagttggagaacgatcaaggctt
gatcagcatcacatagcttggagtcctcaacgtgttttgggttcgccgggtcaacctgct
ccatcttcacttgagatcccgaagcattctcgagttacatggggctctgacacaaatcta
ccttctcccactccaaaccgaactcccaccggtgggaattggggaaaaccgtttgaaaac
aaatggtctcctacccctgcgcagccatcgggttctcttccagtagctaattcagtccga
gggggtgcggtagggctgcaacctcccactgttattccagagagtgggagcgctgctgct
cctgtagtgcattcgcatacgatggtgtcaagtgaattacacaggagacaggtcaatgcg
tcggcttcagttaatctaggtgttgatataaaaaatgcagctgcgtcggtccagaatttg
gttcaatctttgagttcccacaatccttctgccgagactcatggacctggttctgtctca
gtttcaaggcaagaatcattttctgtatcctccatacctgccgctggacctcaaaggtgt
aatgcttcaacccagaagctagaaccaaatccttcccttgccattcctgctcaacttgct
ccttatggtcattgggatggtgcatcacaaaccggtcaatttcctgctcctttcagcact
ggaaatcccgctggggtttttccaactcctggtcaaccgagtacgatgctatcggattcc
tggaggcctgccgttcctgttcagtcaaatgttcagcttcctgctccaaccaatttacct
tggtgcatggccgttgcagataaccagggtgctaccctgagacaggcaccaggaaatcag
aaccctgcgaacatgagctatcagggttcagcttctgttaatcctttacaaaattgggct
gtccctggccaaagacaggtgccagggaatgcaaatccaggttggactggtcctggaaat
acaatgcaaggatgggcaccacctggacaaggacctaacattgttaataatgcaaaccct
gtatggcttccaccagatcaaggagcagcaccaggaagtgtgaatcctggtttcgcgata
ccgtctagaaatacaggtggcatgtggggaaatgaaccgaatcacaatggagacaagttt
ccggatcagcgagataggagctccctgggcggtgaatccggtttcagtggagcaaaacct
tggagtaggcaatcatcattcggcggcggcggtggttcttcgaggtcgtcctttaaagga
cagagagtgtgcaaattccatgaaaatgggcactgcaagaaaggggcatcgtgtgattac
atgcacacttaa
DBGET
integrated database retrieval system
