Hibiscus syriacus (Rose-of-Sharon): 120187089
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Entry
120187089 CDS
T09559
Name
(RefSeq) DNA mismatch repair protein MSH4-like
KO
K08740
DNA mismatch repair protein MSH4
Organism
hsyr
Hibiscus syriacus (Rose-of-Sharon)
Brite
KEGG Orthology (KO) [BR:
hsyr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
hsyr03036
]
120187089
Chromosome and associated proteins [BR:
hsyr03036
]
Eukaryotic type
Meiosis-specific proteins
Others
120187089
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_IV
AAA_14
T2SSE
AAA_29
Motif
Other DBs
NCBI-GeneID:
120187089
NCBI-ProteinID:
XP_039046820
LinkDB
All DBs
Position
Unknown
AA seq
792 aa
AA seq
DB search
MEDDVGERSSFVIGLIENRAKEVGMAAFDLRSASLHLSQYIETSSSYQNTKTLLHFYDPM
VIIVPPNKLAPEGMVGVSELVDRFYASVKKVVMARGCFDDTKGAMLIKNLAAKEPSALGL
DTYYKQYYLCLASASAAIKWVEAEKGVIVTSHSLVVTFNGSFGHVNIDATSVQNLEIVEP
LHSALWGTTNKKRSLFHMLKTTKTIGGTRLLRANLLQPLQDIETINTRLDCVDELMRNAQ
LFYGLSQVLRKFPKETDRVLCHFCFKPKKITNEVLGVDNGKKSQILISSIILLKTALDAL
PLLSKVLKDARCFFLVNVYKTICENEKYAGIRKRIGKVIDEDVLHARVPFVARTQQCFAV
KAGIDGLLDIARRSFCDTSEAIHNLANKYREEYKLPNLKLPFNNRQGFYFSIPHKDIQGK
LPSKFIQVVKHGNNVHCSSLELASLNVRNKSAAAECYVRTEFCLEALVDAIREDITLFTL
LAEALCLLDMIVNSFAHAISTKPFDRYIRPGFTDNGPLAIDGGRHPILESIHSDFVPNNI
FISEASNMVIVTGPNMSGKSTYLQQVCLIVILAQIGCYVPAQFATIRVVDRIFTRMGSMD
NLESNSSTFMTEMKETAFIMQNIAQRSLIVMDELGRATSSSDGLAIAWSCCEHLLSLNAY
TIFATHMDNLSELAAIYPNVKILHFYVDIRNNRLDFKFQLHDGPRHVAHYGLLLAEVAGL
PSSVIETARSITSRITEKEVNRMEVNCLNYNQIKSANHVAHRLICLKYSNQNEDSIRQAL
QLLKESYIDGKF
NT seq
2379 nt
NT seq
+upstream
nt +downstream
nt
atggaagatgacgtgggagagaggtcgagcttcgtgatcggtctcattgaaaacagagct
aaagaggttggaatggctgccttcgatttaagatcagcttcattgcatctttctcaatac
attgaaaccagtagctcatatcaaaatacaaaaactttgctgcatttctatgatcccatg
gtgatcattgttcctccgaacaaactggctcctgaaggtatggttggagtatcagaactg
gtggatcgcttttatgcttcagtcaagaaggttgtaatggctcgtggttgctttgatgac
accaagggggcaatgctgattaagaatctagcagctaaagagccttcagcacttggtcta
gatacatactacaaacagtattatctttgcttggcttctgcttctgctgcaatcaaatgg
gtagaagcggagaaaggtgtcattgtcacgagtcactctttagtggtcacatttaatgga
tcatttggccacgtgaacattgatgctactagtgtccaaaacttggaaattgttgaacca
cttcattctgcactttggggtacaaccaacaagaaaagaagtctgttccacatgcttaag
acaacaaaaactattggagggactagacttcttcgtgccaatcttttgcagcctctacaa
gatattgaaactatcaatactcgtctggattgtgtggatgagttaatgagaaatgcacag
ctattctatggactctctcaggtcttgcgaaagttcccaaaggagactgatagggtactt
tgtcatttctgcttcaagccaaagaaaataacaaatgaagtcttaggtgtggacaatggt
aagaagagccaaatattgatatcaagcatcattcttctgaaaactgcattagatgccttg
ccgttactgtccaaggtgcttaaggatgcacgttgctttttccttgtaaatgtttacaag
actatatgtgaaaatgaaaaatatgctggcattagaaagagaattggaaaggtgattgac
gaagatgtgcttcatgcacgtgttccttttgttgctcgcacacagcagtgttttgctgtc
aaggctggaattgatggactattagatattgctcggagatccttttgtgataccagcgaa
gctatacataaccttgcaaacaagtaccgggaagaatacaagctgccaaatctgaaactc
ccatttaacaatagacaaggtttttactttagcattccacataaagacatccagggcaag
cttcctagcaagttcattcaggttgtgaaacatgggaacaatgtacattgctcatctttg
gaacttgcttctttgaatgttagaaacaaatctgctgctgctgagtgctatgttcgaaca
gaattttgcttggaagccctagttgatgccataagggaggacatcactctgttcacactt
cttgctgaagcactgtgcctcttagatatgattgttaactcattcgcgcatgcaatatcc
accaagccttttgaccgatatattaggccaggatttactgataatggccctctggcaatt
gacggtggaagacaccccattctagaaagcatacacagtgattttgtgcccaacaacatc
ttcatttctgaagcatcaaatatggttattgtaactggaccaaacatgagtgggaagagc
acttatcttcaacaagtgtgtctcatagttattctagctcagattggctgctatgttcca
gcccaatttgcaacaattagagtagtcgatcgtatatttacaaggatgggatcaatggat
aatcttgaatcaaactctagtacgtttatgacagagatgaaagagactgccttcatcatg
cagaatatcgcccaaaggagtttgattgttatggacgaacttgggagggctacttcttcc
tctgatggtttggcaatagcatggagctgctgtgaacatctgctatccctcaacgcgtat
actatatttgccactcatatggataatttgtccgaactagctgccatatatccaaatgtg
aagattcttcacttctacgtcgacattagaaacaaccgcctagactttaagtttcaactc
catgatggaccacgacatgtagcacactatggcctcctactagcagaagtagcgggacta
ccaagttcagtgattgaaaccgctcgaagcataacttcaaggattacagagaaggaagtg
aaccggatggaagtgaactgcctgaattataatcaaataaagtcggcaaaccatgttgct
catagactaatctgcttaaagtattctaatcaaaatgaggactctatccgccaggcattg
caacttctgaaagagagctatattgatggtaaattctaa
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