Hydrogenobacter thermophilus: HTH_1258
Help
Entry
HTH_1258 CDS
T01167
Symbol
rpoN
Name
(GenBank) RNA polymerase sigma 54 factor
KO
K03092
RNA polymerase sigma-54 factor
Organism
hth
Hydrogenobacter thermophilus
Pathway
hth02020
Two-component system
hth02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
hth00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
HTH_1258 (rpoN)
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
HTH_1258 (rpoN)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hth03021
]
HTH_1258 (rpoN)
Transcription machinery [BR:
hth03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
HTH_1258 (rpoN)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_DBD
Sigma54_CBD
HTH_23
LacI
Sigma54_AID
Sigma70_r4
HTH_3
HTH_31
HTH_17
HTH_Tnp_ISL3
HTH_29
MarR_2
HTH_21
Arg_repressor
Imm5
HTH_IclR
Ig_6
Motif
Other DBs
NCBI-ProteinID:
BAI69712
UniProt:
D3DIR0
LinkDB
All DBs
Position
complement(1141384..1142535)
Genome browser
AA seq
383 aa
AA seq
DB search
MVRGELKTTVKPKLSLSVLLKQDVELLNKNSEQLEQILEEEEKQNPYITHVVKRTPRWFF
QEQDKKPKEAVARNSLMEEISKQISLEFDHIDKEIALEILYRCDENGFFKDSIEEIARLY
GVSSEYVEDIREFIMTEIEPVGVASRNLEEFIKVQLQEMYPKQVEFHERVLNAIKTGKLD
EDVKEAISHLRLKPIEDEGSASAVARVDLLLEHDGENWYIFIQEDFLELQIEEDAHPQDD
IEKEKLRRAKNIKLILDIRRRVLRHIGEAIVKRQEGFLLRNEPLKTLTVKEVAESSQVSM
STVSRIINSRYAKTPAGIYPLRFFFVKESKVGMSKEELMRAIKEVLQENTSISDGKVAQM
LKGRGIDIARRTVAKYRKLLGLR
NT seq
1152 nt
NT seq
+upstream
nt +downstream
nt
atggtaagaggcgagctcaaaacaactgtcaaacccaagctaagcctttcagtgcttcta
aagcaagatgtggagctgttaaataagaactctgagcagttggagcagatacttgaggag
gaggaaaaacaaaatccttatataactcatgtagtcaagcgcacacccaggtggttcttt
caagagcaagataagaaaccaaaagaggctgtagcaagaaatagcctaatggaggaaatt
tcaaaacagataagccttgaatttgaccatattgataaggagatagctcttgagatctta
tacagatgcgatgagaacggatttttcaaagattccatagaagagatagcaaggctttat
ggagtaagtagcgagtatgtggaagacataagggagtttatcatgacggaaatagagcct
gtgggtgttgcctccagaaatttggaagagtttataaaggtgcaattgcaagagatgtat
cctaagcaagtggaatttcatgagcgtgtgctaaatgccataaaaacaggaaagctggat
gaagatgtgaaagaggcaatctcccatctgaggttaaagcccatagaagacgaaggctcg
gcttcggcggtagcaagagtagacctacttttggagcatgacggggaaaactggtacatt
ttcatacaggaagactttttagagttgcagatagaagaagatgcacatccgcaggatgat
attgaaaaagaaaaactcagaagagccaaaaacataaagcttattcttgacataagaagg
agggtgctccgacacataggtgaggctattgtaaaaaggcaggaaggtttcttgctaaga
aacgaacctctcaagacgctcacggtgaaagaagtggcagaaagttcacaagtgagcatg
tcaacggtaagcaggattatcaattccagatacgccaaaacacccgcaggcatctaccca
ctgcggttcttttttgtgaaggagagtaaagtaggtatgagcaaagaggagctgatgaga
gccataaaggaggtgcttcaggagaatacatccatcagtgacggcaaagtggcgcagatg
ctaaaaggtagagggatagacatagcgagaaggacggtagccaagtatagaaagcttttg
ggactaagatga
DBGET
integrated database retrieval system
