Hydrogenophaga taeniospiralis: KI616_01700
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Entry
KI616_01700 CDS
T08018
Symbol
xth
Name
(GenBank) exodeoxyribonuclease III
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
htn
Hydrogenophaga taeniospiralis
Pathway
htn03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
htn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
KI616_01700 (xth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
htn03400
]
KI616_01700 (xth)
Enzymes [BR:
htn01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
KI616_01700 (xth)
DNA repair and recombination proteins [BR:
htn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
KI616_01700 (xth)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exo_endo_phos
Exo_endo_phos_2
Glyco_hydro_47
DUF4376
Motif
Other DBs
NCBI-ProteinID:
UCU94623
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All DBs
Position
337065..337868
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AA seq
267 aa
AA seq
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MGKSLFKLTSLNLNGIRSASTKGLEAWLAKHAPDCICVQEVKAQAPDVSGRFEALAGLKG
HFHFAEKKGYSGVAVYTRHEPSDVVVGFDGGEFDAEGRYVELRFDTPTAKRSIISVYCPS
GSSGPERQEAKYRFLDVFYPHLMALKGQREFIICSDVNIAHQNADLKNWRSNQKNSGFLP
EERAWMTKLLTDGGLVDVYRRLQPDTTDTCYTWWSNRGQAYANNVGWRLDYHLATPALAE
HARTEAIYKAEKFSDHAPITIEYDFTL
NT seq
804 nt
NT seq
+upstream
nt +downstream
nt
atggggaaatccttgttcaaactgaccagcctcaacctcaacggcatccgctccgccagc
accaaggggctggaagcgtggctcgccaagcatgcgcccgattgtatttgtgtgcaggaa
gtcaaggcgcaggcgcccgacgtcagcgggcgcttcgaggccctcgccggactcaagggc
cattttcacttcgccgagaagaaaggctattccggcgtcgccgtctacacgcgccatgag
cccagcgacgtggtggtgggtttcgacggtggcgagttcgacgctgaaggccgctacgtg
gaactgcgtttcgacacgcccaccgcgaaacgttccatcatcagcgtctactgccccagc
ggctcttcaggccccgagcggcaggaagccaaataccgctttctggatgtgttctacccg
cacctgatggcgctcaaaggccagcgcgagttcatcatctgcagcgatgtcaacatcgcc
caccagaacgccgacctgaaaaactggcgcagcaaccagaagaacagcggcttcctgccc
gaagagcgcgcgtggatgaccaagctgctgaccgatggcggcctggtggacgtgtaccgc
cgtctgcagcccgacaccaccgacacctgctacacatggtggagcaaccgcggccaggcc
tacgcgaacaacgtggggtggcggcttgactaccacctggccacgccggcgctggccgaa
cacgcgcgcactgaagcgatctacaaggccgagaagttcagcgaccacgcgccgatcacg
atcgaatacgacttcacgctctga
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