KEGG   Haloterrigena turkmenica: Htur_1898
Entry
Htur_1898         CDS       T01154                                 
Name
(GenBank) DNA ligase I, ATP-dependent Dnl1
  KO
K10747  DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
Organism
htu  Haloterrigena turkmenica
Pathway
htu03030  DNA replication
htu03410  Base excision repair
htu03420  Nucleotide excision repair
htu03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:htu00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    Htur_1898
   03410 Base excision repair
    Htur_1898
   03420 Nucleotide excision repair
    Htur_1898
   03430 Mismatch repair
    Htur_1898
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:htu03032]
    Htur_1898
   03400 DNA repair and recombination proteins [BR:htu03400]
    Htur_1898
Enzymes [BR:htu01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     Htur_1898
    6.5.1.6  DNA ligase (ATP or NAD+)
     Htur_1898
    6.5.1.7  DNA ligase (ATP, ADP or GTP)
     Htur_1898
DNA replication proteins [BR:htu03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   Other elongation factors
    Htur_1898
 Prokaryotic type
   Elongation factors (archaeal)
    Other elongation factors
     Htur_1898
DNA repair and recombination proteins [BR:htu03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     Htur_1898
   NER (nucleotide excision repair)
    Other NER factors
     Htur_1898
   MMR (mismatch excision repair)
    Other MMR factors
     Htur_1898
SSDB
Motif
Pfam: DNA_ligase_A_M DNA_ligase_A_N DNA_ligase_A_C mRNA_cap_enzyme
Other DBs
NCBI-ProteinID: ADB60783
UniProt: D2RSK7
LinkDB
Position
1972827..1974605
AA seq 592 aa
MEFATFADRAAAIEAEPADLEIVARTSELLADAGDDSEDRRSAGSAVDPQTLEVVARFVQ
GRVFPAWDSTKLDIGPTTCYEAIARAAGTNVGSDDVEERLAEVGEIGEVAASYDFGGQQG
LGAFTGGGGGNGAGGAAGNDLTVREVYETLADLAAAEGSGSQDRKIDLLFGLFNRCSSEE
ARYLARLVLSEMRIGVGEGSVRDAISEAFDVPVEHVERALQVSNDYGQVARVARDEGREG
LDAMDLEVGRPVQAMLAQAGTVTDALEEWDEAAVEWKYDGARVQLHHRIGDDGTTETCVF
SRNMEEVTDAFPEVVEFADETLEEPAILDGEVVAIDEDDEPLPFQEVLKRFRRKHDVAKA
REDVTVRPVFFDCLHAGGEDLLEEPLTTRHERLRAVLADADDSSDATVEDERDIEALSLL
WTTDDPDEIEAIDAEALEAGHEGIMLKDPDSAYSPGRRGKHWRKRKPDVETLDCVVTGAE
WGEGRRATFLGTFELSVRAGDDLETVGKVATGITDEKLEELTALLEPHIATEEGQAVDIE
PAVVFEVGYEEIQSSPTYSSGYALRFPRFLGVRSDKDPDDADTLERVERLRA
NT seq 1779 nt   +upstreamnt  +downstreamnt
atggagttcgccacgttcgccgaccgcgccgccgcgatcgaagccgagccggccgacctc
gagatcgtcgctcgaaccagcgagttgctcgcggacgcgggcgacgacagcgaggaccga
cgctccgctggctctgcggtagacccgcagaccctcgaggtcgtcgcccggttcgtccag
ggacgtgtcttcccggcctgggactcgacgaaactcgacatcggcccgacgacgtgctac
gaggcgatcgcccgcgcggcggggacgaacgtgggaagcgacgacgtcgaggagcgactg
gccgaggtcggcgagatcggcgaggtggccgcgagctacgacttcggcggccagcaggga
ctcggcgcgtttacgggcggcggtggcggaaacggtgccggcggcgccgccgggaacgat
ctcacggtccgcgaggtctacgagacgctcgccgacctcgccgccgcggagggatcgggg
agccaggaccgcaagatcgacctgctgttcggtctcttcaatcgctgctcgagcgaggag
gcccgctacctcgcgcgactcgtcctctcggagatgcgcatcggcgtcggcgagggctcc
gtccgggacgcgatcagcgaggcgttcgacgtacccgtcgagcatgtcgagcgcgccctg
caggtctcgaacgactacgggcaggtcgcccgagtcgcccgcgacgagggccgcgagggg
ctcgacgcgatggatctcgaggtcggccggccggtccaggcgatgctcgctcaggcggga
acggtgaccgacgcgctcgaggagtgggacgaagccgccgtcgaatggaagtacgacggc
gctcgcgtgcaattgcatcatcggatcggcgatgacggaactaccgagacctgcgtcttc
tcgagaaacatggaggaggtcaccgacgccttccccgaggtcgtcgagttcgccgacgaa
acgctcgaggagccggcaatcctcgacggcgaggtcgtcgcgatcgacgaagacgacgag
ccgctgccgttccaagaggtactcaagcgcttccgccggaaacacgacgtcgcgaaggcc
cgcgaggacgtgacggttcggccggtgttcttcgactgtctgcacgccggcggcgaggac
ttactcgaggagccgctgacgacgcgccacgagcggttgcgggcggtgctggccgatgcc
gacgatagcagcgacgcgaccgtcgaggacgagcgcgacatcgaggccctctcgctgctc
tggacgaccgacgatcccgacgagatcgaggcgatcgacgccgaggccctcgaggcggga
cacgaggggatcatgctcaaagaccccgactcggcgtactcgccgggccggcggggcaaa
cactggcgcaagcgcaaacccgacgtggagacgctggactgcgtggtgaccggcgcggag
tggggcgagggccggcgcgcgacgttcctcggcaccttcgaactctccgtgcgcgcgggc
gacgacttggagaccgtcggcaaggtcgcgacgggaatcaccgacgagaaactcgaggag
ctcacggcgttgctcgagccccacatcgccaccgaggagggccaggcggtggacatagag
cccgcggtcgtcttcgaggtcggctacgaggagatccagagctcgccgacctactcgtcg
ggctacgcgcttcgcttcccgcggttcctcggcgttcgctccgacaaggaccccgacgac
gcggacacgctcgagcgcgtcgaacggctgcgagcgtag

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