Homalodisca vitripennis (glassy-winged sharpshooter): 124359933
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Entry
124359933 CDS
T09217
Name
(RefSeq) ATP-dependent RNA helicase DDX3X isoform X1
KO
K11594
ATP-dependent RNA helicase DDX3X [EC:
5.6.2.7
]
Organism
hvi
Homalodisca vitripennis (glassy-winged sharpshooter)
Brite
KEGG Orthology (KO) [BR:
hvi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hvi03019
]
124359933
03041 Spliceosome [BR:
hvi03041
]
124359933
03036 Chromosome and associated proteins [BR:
hvi03036
]
124359933
Enzymes [BR:
hvi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
124359933
Messenger RNA biogenesis [BR:
hvi03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
124359933
mRNA cycle factors
Common to processing body (P body) and stress granule
124359933
Spliceosome [BR:
hvi03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
124359933
Chromosome and associated proteins [BR:
hvi03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
124359933
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Motif
Other DBs
NCBI-GeneID:
124359933
NCBI-ProteinID:
XP_046669039
EnsemblRapid:
LOC124359933
LinkDB
All DBs
Position
4:complement(107765960..107827049)
Genome browser
AA seq
706 aa
AA seq
DB search
MSNVPNQNGTGLEQRFAGLDLQDGNKEPAGRKYIPPHLRNKPAGESRGDTGRDSRGDSRG
ETHYSSSSFSDRDNRNRNQGGGYNSRGGQGNRRDGGGRRNGDYESQNGVDRWDDRGDRGG
YRGRDSADSWSSRGSNWGDRRGDRGGNRDDERGGPIRNNDRWQSPRENDWTIPLAKDERL
EIELFGTGNTGINFNKYEDIPVDATGEDVPNHIDSFSDIQMTEIISCNIALARYDKPTPV
QKYAIPIIMARRDVMACAQTGSGKTAAFLVPILNQMYERGPQAFNGSNTQRVKMYGKRKQ
FPLGLVLAPTRELATQIYDESRKFAYRSRLRPCVVYGGSNVGDQMRDLERGCHLLVATPG
RLVDMLDRGKIGLEHCRFLVLDEADRMLDMGFEPQIRTIVENNGMPKTGERQTLMFSATF
PKEIQILARDFLDNYIFLAIGRVGSTSENITQKVVWVEDNDKRSFLLDLLNAIQLSQPSA
ESLTLVFVETKKGADSLEDFLHQLGFPVTSIHGDRTQPEREAALRRFRSGNTPILVATAV
AARGLDIPHVKHVINFDLPNDVEEYVHRIGRTGRMGNLGTATSFFNAKNKNLVRDLLELL
VETKQEVPPWLEDMLREVGQPMSRGRGGSKGNRFSSGFGARDYRTQSGGGGVSGNRGSNP
RQGSGYNSGNQGGGYYGGGGGGGNSYNNYSSNSNSNNSQGKDWWEQ
NT seq
2121 nt
NT seq
+upstream
nt +downstream
nt
atgagtaatgtacccaaccaaaatggaacaggtctagagcagcggtttgctggtctggac
ttgcaggacggcaacaaggaacctgccggccgtaaatacatccctcctcatcttcgcaat
aagccagctggtgaaagtcgcggagatactggcagagacagcagaggtgacagtcgagga
gaaactcactactcttcctccagcttcagtgacagggataaccgtaacaggaatcaagga
ggaggatataatagcaggggtggacaaggtaatcgcagagatggtggcggtcgccggaat
ggagactacgagagccagaatggtgtggaccgatgggatgatcgtggggaccgcggtgga
taccgtggcagagatagcgctgattcttggagtagccgtgggagcaattggggtgaccgg
cgtggagacagaggtgggaaccgagatgacgagagaggaggacccatccgcaacaacgac
cgctggcagtcaccacgtgagaatgactggaccatacctctggctaaggatgaacgtctg
gagattgagctgtttggtactggaaatactggtattaacttcaataagtatgaggatatc
ccagtggatgctacaggcgaagatgtacccaatcacattgattccttttcggatatccag
atgactgagataatctcctgcaacattgctctagctcgctatgacaaaccaacccccgtg
caaaaatatgcaatccccattatcatggcacgacgagatgtgatggcgtgtgcacagaca
ggttccggcaagactgccgcctttctagtgccaattctcaaccagatgtatgaaagaggc
ccccaggcattcaacgggtcaaacactcaaagggtaaagatgtatgggaaacgtaagcag
tttcctctgggcctagtgcttgctccaacacgagagttagctacacagatttatgatgaa
agccgaaaatttgcctatcgatcacgtcttcgaccttgtgttgtttatggaggatccaat
gtgggtgatcagatgcgagacttggagcgtggatgtcacctcttggttgctacccctggg
cgactggtagacatgttggaccgaggcaagataggtcttgaacactgcagatttttggtc
cttgacgaagctgataggatgttagacatgggttttgaacctcaaattcgaacaatcgta
gagaacaatggaatgccgaaaactggtgaacgtcagactcttatgttttctgcaacattt
cctaaagaaatccagattttagctagagatttcctggacaattacattttcctagccatc
ggccgtgtcggctccacttccgagaacattacccagaaggtcgtctgggtggaagacaat
gacaagcgcagcttcttgttggatttgcttaatgcaatacaactgagtcagccttcagca
gagtcacttactctagtgtttgtcgagaccaagaagggtgccgattcattggaagacttc
ctacaccagctgggattcccagtaacatccatccatggagacaggacccagccggaacga
gaggcagcactccggcgtttccggtctggcaatacaccgatcttggtggctacagccgta
gcagctcgaggtttagatataccgcatgtgaagcatgtcatcaactttgacctgccaaat
gatgtggaggagtacgtccatcgcatcggtcgtacgggtcgtatgggtaatcttggtacg
gcaacatcattcttcaatgccaagaataaaaatcttgttcgagacttgctagaattgcta
gtggagacaaagcaagaagtaccaccttggctagaggacatgttaagggaagttgggcag
cccatgtctcgtggtcgtggtggttccaaaggtaatcgctttagcagcggatttggcgct
cgtgattatcgtacacaaagtggaggtggtggagtctcagggaaccggggaagtaatcca
agacaaggaagtggttataacagtggtaaccaaggaggagggtattatggtggtggcggt
ggaggcggcaacagttacaacaactactccagtaactccaacagcaacaacagtcagggc
aaggactggtgggaacagtaa
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