Hydrogenophaga sp. PBC: Q5W_16325
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Entry
Q5W_16325 CDS
T04491
Name
(GenBank) sigma-54-dependent Fis family transcriptional regulator
Organism
hyb
Hydrogenophaga sp. PBC
SSDB
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Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Response_reg
Sigma54_activ_2
HTH_8
AAA_5
Mg_chelatase
AAA_16
AAA
Xre-like-HTH
HTH_23
AAA_2
cREC_REC
HTH_30
Motif
Other DBs
NCBI-ProteinID:
AOS80424
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Position
3439375..3440781
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AA seq
468 aa
AA seq
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MPRSPLPRIRAVDNPNTPSPDRSLEGWPNWSILVVDDEQGMLNFLVKTLAPRCHFVMSAT
SAEEGAEWLRGHHVDLVVLDISLPGKSGVEWLKELREQGYTGEVILITAFADLDTAIEAL
RAGASDFILKPFRVPQILNAIKQCHERARLRRENFVLRRAVGPTPVHRASLVGDSPVMAA
LRGSLERVAAVDSTVLLQGESGTGKELVARELHALGARAAGPFVPVNCAAVSPELIASEL
FGHAKGAFPGATRARDGLFHYAQGGTLFLDEIAELPLPIQATLLRAIEDLRIRPVGSEQL
MPVNLRIVAATNRSLSAEVEAGRFRKDLYFRLQVVELALPPLREHKADIAALVAHFMAQL
TPTLGAEPLAISEQEMDFLHQYDWPGNVRELRNLVERSLILGSLNVSALYPGSPRAPVTE
RPTDLHALEKMHILTVLDSVQGDKTRAAQLLGVSRRTLERRVAEWGVA
NT seq
1407 nt
NT seq
+upstream
nt +downstream
nt
gtgccccgcagcccgctccctagaatccgggcggtggacaaccccaacaccccgagccct
gaccgcagcctggaaggctggcccaactggtccatcctggtggtggacgacgagcagggc
atgctcaacttcctcgtcaagaccctggcgccgcgctgccacttcgtgatgagcgccacc
agcgccgaggaaggcgccgaatggctgcgcggccaccacgtggacctggtggtgctcgac
atctcgctgcccggcaagagcggcgtggaatggctcaaggaactgcgcgaacagggctac
accggcgaggtcatcctcatcaccgcgttcgccgatctcgacaccgccatcgaggccctg
cgcgcgggcgcgtccgacttcatcctcaagccctttcgcgtcccgcagatcctcaacgcc
atcaagcagtgccacgaacgcgcgcgcctgcggcgcgagaacttcgtgctgcgccgcgcc
gttggccccacccccgtgcaccgcgcctcgctggtaggcgactcgccggtcatggccgcg
ctgcgcggctcgctcgagcgcgtggccgcggtcgacagcaccgtgctgctgcagggcgag
tccggcaccggcaaggagctcgtggcgcgcgagttgcacgcgttgggtgcgcgcgcggca
gggcccttcgtgccggtcaactgcgccgccgtctcgcccgaactcatcgccagcgagctc
ttcggccacgccaagggtgccttccccggtgccacacgcgcgcgcgacggcctattccac
tacgcccagggcggcaccctcttccttgacgagatcgccgagctgccactgcccatccag
gccacgctgctgcgcgccatcgaagacctgcgcatccgccccgtgggcagcgagcagctc
atgccggtcaacctgcgcatcgtcgcggcgaccaaccgctcgctcagcgccgaggtcgag
gccgggcgctttcgcaaggacctgtatttccgactgcaggtggtcgagctcgcgctgccc
ccgctgcgcgaacacaaggccgatatcgccgcgctggtggcgcacttcatggcccagctc
acgcccacgctgggggcagagccgcttgccatcagcgaacaggagatggacttcctgcac
cagtacgactggcccggcaatgtgcgcgagctgcgcaacctcgtcgagcgctcgctcatc
ctgggcagcctgaacgtgtcggccctgtacccgggttcacccagggcgccggtgaccgaa
cgccccaccgacctgcacgcactggagaagatgcacatcctgaccgtgctcgactcggtg
cagggcgacaagacgcgcgccgcgcaactgctgggcgtgtcgcgccgcacgctggaacgg
cgcgtggccgaatggggcgtggcctga
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