Hydrogenophaga sp. PAMC20947: E5678_03890
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Entry
E5678_03890 CDS
T05960
Name
(GenBank) 2-oxoglutarate dehydrogenase E1 component
KO
K00164
2-oxoglutarate dehydrogenase E1 component [EC:
1.2.4.2
]
Organism
hyc
Hydrogenophaga sp. PAMC20947
Pathway
hyc00020
Citrate cycle (TCA cycle)
hyc00785
Lipoic acid metabolism
hyc01100
Metabolic pathways
hyc01110
Biosynthesis of secondary metabolites
hyc01120
Microbial metabolism in diverse environments
hyc01200
Carbon metabolism
hyc01210
2-Oxocarboxylic acid metabolism
Module
hyc_M00009
Citrate cycle (TCA cycle, Krebs cycle)
hyc_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
Brite
KEGG Orthology (KO) [BR:
hyc00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
E5678_03890
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
E5678_03890
Enzymes [BR:
hyc01000
]
1. Oxidoreductases
1.2 Acting on the aldehyde or oxo group of donors
1.2.4 With a disulfide as acceptor
1.2.4.2 oxoglutarate dehydrogenase (succinyl-transferring)
E5678_03890
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Gene cluster
GFIT
Motif
Pfam:
OxoGdeHyase_C
Transket_pyr
E1_dh
2-oxogl_dehyd_N
Motif
Other DBs
NCBI-ProteinID:
QCB45243
UniProt:
A0A4V1CHE9
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Position
850620..853505
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AA seq
961 aa
AA seq
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MSDSSSGNVYVAYQNNSYLFGGNAPYVEEMYENYLASPGSVSESWREYFDALQNVPAADG
SDARDVPHLPVVNAFAERAKQGGTRVVMAAGADSDLGRKRVAVQQLIAAYRNVGSRWADL
DPLKRDERDNIPELEPSFYGFTDSDFETVFNTSNTFFGKEVMSLRDLLNALRETYCGTVG
TEYMYTSDQREKRWWQEQLESKRSKPVYDADKKKEILKQLTAAEGLERYLHTKYVGQKRF
SLEGGESFIACMHELVQLSGSRGVQEVVIGMAHRGRLNVLVNTLGKTPAGLFAEFDHTAV
EDLPSGDVKYHQGFSSDIATPGGPVHLTLAFNPSHLEIVNPVVEGSVRSRQERRKDTDGD
TVLPILVHGDAAFAGQGVVMETLALSQTRGYYTGGTVHVVINNQIGFTTSDPRDTRSTLY
CTDVVKMIEAPVLHVNGDDPEAVVFCTQLALDYRQEFNKDVVIDIVCFRKLGHNEQDTPA
LTQPLMYKKIAQHPGTRKLYADRLAAQGLGDTLGDEMVKAYRLAMDEGRHAKEFTITNAH
NKFVVDWSPYLKAKWTDNGDTSLPEKEWKRIAEKLTTIPGNVTAHNLVKKVYDDRAAMGR
GDVNVDWGMGESMAFATLVGAGYGLRLSGEDCGRGTFTHRHSVIHDQSREKWDSGTYIPL
QNISADQGQFTVIDSILSEEAVLGFEYGFASNDPNTLVIWEAQFGDFLNGAQVVVDQFIA
SGEVKWGRLNGITLMLPHGYEGQGPEHSSARIERFMQLAADTNMQIVQPTSASQIFHVLR
RQMIRPLRKPLIIFTPKSLLRNKDATSPLAEFTKGQFQTVIPEQNEAVVKKADKVKRIIC
CSGKVYYDLVKKREEMGTDDAVILRVEQLYPFPHKVFSAEVRKYPNATDIVWCQDEPQNQ
GAWFFVQHYIHENMLDGQKLGYAGRAASASPAVGYAHLHQEQQKNLIEAAFAKLKGFVLT
K
NT seq
2886 nt
NT seq
+upstream
nt +downstream
nt
atgagcgattcctcatccggcaacgtttacgtcgcctatcaaaataactcgtaccttttc
ggcggcaatgcgccgtatgtcgaagagatgtacgaaaactacctggccagccccggtagc
gtgtcagagtcctggcgcgaatatttcgatgcactgcaaaacgtgcccgccgctgacggc
tctgatgcccgcgacgtcccccacctcccggttgtcaatgcgtttgccgagcgcgccaaa
caaggcggaacccgtgtggtcatggccgctggtgccgactccgatctggggcgcaagcgt
gtcgctgttcagcagctgatcgccgcttaccgcaatgtcggttcacgctgggccgatctc
gatcccctcaagcgcgacgaacgcgacaacattcccgagctggagccgtcgttctacggc
ttcaccgattccgatttcgagaccgtgttcaacaccagcaacacgttcttcggcaaagaa
gtcatgtcgctgcgcgacctgctcaatgcccttcgcgagacctattgcggtaccgtgggc
accgagtacatgtacacctccgaccagcgcgagaagcgctggtggcaagagcagctggag
agcaagcgcagcaagccggtgtacgacgccgacaagaaaaaggagattctgaagcaactg
accgctgccgaaggccttgagcgttacctgcacaccaagtacgtggggcagaagcgcttc
tcgctggaaggtggcgagagtttcattgcctgtatgcacgagctggtgcagctttccggc
tcgcgcggcgtgcaggaagtggtgatcggcatggcccaccgcggccgcctcaatgtgttg
gttaacaccctgggcaagacgcccgccggcttgtttgctgagtttgaccacaccgccgtt
gaagatctgccatccggtgatgtgaagtaccaccagggtttcagctcggacatcgccacc
cctggtggcccggtccacctgacgctggcgttcaacccgtcccacctggaaatcgtgaac
ccagtcgtcgaaggctcggtgcgttcgcgccaggagcgccgcaaggacacggacggcgac
accgtgttgccgattctggtgcacggcgatgccgcttttgccggccaaggcgtggtcatg
gagaccctggccctgtcgcaaacccgtggctactacacgggcggcacggtgcacgtggtg
atcaacaaccagattggtttcaccaccagtgacccgcgcgacacgcgctcgacgctgtat
tgcaccgatgtggtcaagatgattgaggcccccgtgttgcacgtcaacggtgacgatccc
gaagcggtggtgttctgcacgcagctggcactggactaccgccaggagttcaacaaagac
gtcgtgatcgacattgtttgcttccgcaaactgggtcacaacgagcaagacacaccagcg
ctgacgcaaccgctgatgtacaaaaagatcgcgcaacacccgggtacgcgcaagctgtat
gccgatcgcctggccgcgcaaggtctcggtgacacgctgggtgacgaaatggtcaaggcc
taccgcctggccatggacgaaggccgccacgccaaagaattcaccatcaccaacgcgcac
aacaagtttgtggtggactggtcgccttacctcaaagccaagtggaccgacaacggtgac
acgagcctgcctgagaaggaatggaagcgcatcgccgagaaactgaccaccattcccggc
aatgtgacggctcacaatctggtgaaaaaggtctatgacgaccgcgctgccatgggccgc
ggggacgtcaatgtggactggggcatgggtgagagcatggctttcgccacgctggtgggc
gccggttatggtcttcgcctctccggcgaagattgcgggcgcggtaccttcacccaccga
cactccgtgatccacgaccagagccgggaaaagtgggacagcggtacctacattcccctg
cagaacatcagcgccgatcaaggccagttcaccgtcatcgattccatcctgtcggaagaa
gcggtgctgggttttgaatatggttttgccagcaacgaccccaacaccttggtgatctgg
gaagcccagttcggcgatttcctgaacggcgctcaagtggtggtcgatcagttcatcgcc
agtggtgaagtgaagtggggccgcttgaatggcatcacgctgatgctgccccatggttac
gaaggccagggccctgagcacagctcggcccgtatcgagcgcttcatgcagctcgctgcc
gataccaacatgcagatcgtgcagccgacctcggccagccagatctttcacgtgttgcgc
cgccagatgatccgcccactgcgcaagccgctgatcatcttcacgcccaagtccctcttg
cgcaacaaggatgccacgtcgcccctggccgaattcaccaaaggccagttccagacggtg
attccggagcagaacgaggcggtggtgaaaaaggccgacaaggtcaagcgcatcatttgt
tgctcgggcaaggtttactacgacctggtcaaaaaacgcgaagaaatgggtaccgacgat
gcggtcatcctgcgtgttgagcagctctaccccttcccgcacaaggtgttctcggccgaa
gtcagaaaatacccgaacgccaccgacatcgtgtggtgccaggacgagccacaaaaccag
ggcgcgtggttctttgtgcagcactacatccacgagaacatgctcgatggccagaagctg
ggttatgcgggtcgcgcggcttcggcttcgcctgcggtgggctatgcccatctgcatcag
gaacaacaaaagaacctgatcgaagccgctttcgccaagttgaagggctttgtcctcacg
aaatga
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