Hydrogenophaga sp. PAMC20947: E5678_13805
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Entry
E5678_13805 CDS
T05960
Symbol
ruvA
Name
(GenBank) Holliday junction branch migration protein RuvA
KO
K03550
holliday junction DNA helicase RuvA
Organism
hyc
Hydrogenophaga sp. PAMC20947
Pathway
hyc03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
hyc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
E5678_13805 (ruvA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hyc03400
]
E5678_13805 (ruvA)
DNA repair and recombination proteins [BR:
hyc03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
E5678_13805 (ruvA)
RecFOR pathway proteins
E5678_13805 (ruvA)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RuvA_N
HHH_5
RuvA_C
HHH
RecR_HhH
HHH_8
IMS_HHH
5_3_exonuc
PG_binding_2
Motif
Other DBs
NCBI-ProteinID:
QCB47000
UniProt:
A0A4P7R9U6
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Position
complement(3050420..3050998)
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AA seq
192 aa
AA seq
DB search
MIGKLTGILLEKNPPQILIDCHGVGYEVDVPMSTFYNLPGVGEAVSLLTHFVVREDAQIL
YGFGTAQEREAFRQLVKISGVGPRTALSVLSGMGVADLAQAVTAQDSARIVKVPGIGKKT
AERLLLELKGKLGADLGALGGASAVGDAASDIQQALMALGYSEKDAALALRALPKDVGVS
EGIKLALKSLAK
NT seq
579 nt
NT seq
+upstream
nt +downstream
nt
atgataggcaagttgactggcatcctgctggaaaaaaatcccccgcaaattctgatcgac
tgccacggcgtgggttacgaggtggatgtgccgatgagcacgttctacaacttgcccggg
gtgggggaggctgtgtcgctgctgacgcattttgtggtgcgtgaggacgcccagattctt
tacggctttggcactgcgcaagagcgggaagcctttcgccagctggtcaagatcagcggg
gtggggccccggacagcgctgtcggttttgtcgggcatgggtgtggccgacctggcgcaa
gcggtgaccgcgcaagacagcgcgcgcattgtgaaagtaccgggcattggcaaaaagacg
gctgagcgcctgttgctggagctcaagggcaagctcggcgcagaccttggcgcgctgggc
ggtgcctcggccgtgggggatgcggccagcgatatccagcaagccttgatggctttgggc
tacagcgaaaaagacgccgcgctcgcactcagagccctgcccaaggatgtgggggtcagc
gaaggcatcaagctggcgctcaagtcactggcgaagtga
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