Hymenobacter sp. DG25B: PK28_03585
Help
Entry
PK28_03585 CDS
T03500
Name
(GenBank) alanine racemase
KO
K01798
Alr-MurF fusion protein [EC:
5.1.1.1
6.3.2.10
]
Organism
hyd
Hymenobacter sp. DG25B
Pathway
hyd00300
Lysine biosynthesis
hyd00470
D-Amino acid metabolism
hyd00550
Peptidoglycan biosynthesis
hyd01100
Metabolic pathways
hyd01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
hyd00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
PK28_03585
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
PK28_03585
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
PK28_03585
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
PK28_03585
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
hyd01011
]
PK28_03585
Enzymes [BR:
hyd01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.1 alanine racemase
PK28_03585
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.10 UDP-N-acetylmuramoyl-tripeptide---D-alanyl-D-alanine ligase
PK28_03585
Peptidoglycan biosynthesis and degradation proteins [BR:
hyd01011
]
Precursor biosynthesis
Amino acid ligase
PK28_03585
Racemase
PK28_03585
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ala_racemase_N
Ala_racemase_C
Mur_ligase_M
Mur_ligase
Mur_ligase_C
Ribonuclease
Motif
Other DBs
NCBI-ProteinID:
AIZ62998
UniProt:
A0A0A7LKN2
LinkDB
All DBs
Position
836390..838888
Genome browser
AA seq
832 aa
AA seq
DB search
MLLFSHLPHITGGTLLPTPAAPPRPVQHLLLDSRHVGVAAGALFFAIRGAQHNGHCYLPD
LYQQGVRQFVVDRADEIPQGVEAYPEACFLLVSDSLLALQAIAAHHRAQFRVPVVGITGS
NGKTIVKEWLAQLLSPDELICKSPRSYNSQVGVPLSVWELNSTHTFGIFEAGISERGEME
RLARVIQPTLGIFTNLGTAHDAGFTSATDKAREKMRLFAGVDTLFYCRDHALVHATAQEV
LDESRTFTWSRQHPQQAHVAVTVAEASADRTVVHVALDRPLPQEYTFTVPFADEPSLENA
LHVLTVLLWLQVPATEIQHRLDRLHPVAMRLEMKQALNDCYILDDTYNNDLAGLSLALDM
LARQPRRGRRSLILSDLLQSGLPAAELYARVATQLATHQVERLLGVGPDISAHAAAFPGI
DKEFFADTEEFLARVRPEQFRHETILVKGARRFGFERIVAAFQQKIHGTVLEVNFDALVH
NLNFYRSRLQPGTRLMVMVKAFAYGSGSYEVANLLQFHRADYLAVAYTDEGVALREQGIS
LPLMVMNPSPDSFQKMQQYHLEPEIYSFEVLQQYLQVAAEQPLPAVHLKLDTGMRRLGFA
EEDMPQLCALLRANAGRLRVASALTHLAGADEEQHNSFSQEQLAAFSRMTPLVEAALGYS
IIKHALNSAGILRFPQAHFDMVRLGIGLYGVEATGQEQEALRPVSTLRTTVSQVKTLAAG
QTVGYGRRGSATAHNRRIATLAIGYADGYDRRFGNGGGEVIIRGQRAPIVGNVCMDMCMA
DVTHIAGAQAGDTAEVFGPGITLLELANRIGTIPYELLTNVSERVKRVFYAE
NT seq
2499 nt
NT seq
+upstream
nt +downstream
nt
atgctgctattctcccacctgccccatattaccggcggtacgttgctgcccacgcccgcc
gctccgccccgccccgtgcaacatctgctgctggatagccggcacgtgggcgtagcggcc
ggggcactgttctttgccattcggggcgctcagcacaatggccactgctacctgccggac
ctgtaccagcagggggtgcgccagtttgtggtagaccgcgccgacgaaattccccagggc
gtggaagcctacccggaagcctgttttttgctggtttcggatagtttgctggcgctacag
gcaatagcagcgcaccaccgcgcgcaattccgcgtgcccgtggtgggtattacgggttcc
aacggcaaaaccattgtgaaagaatggctggcccagctgctgagccccgatgagctgatc
tgcaaaagcccgcgcagctacaactcccaggtgggcgtgccgctgagtgtatgggagctg
aacagcacgcacacttttggtatttttgaagccggcatttctgagcggggtgagatggag
cggctggcccgcgtaattcagcccacgctgggtattttcactaacctgggcaccgcgcac
gatgccggctttacctccgccaccgataaagcgcgggaaaaaatgcgcctttttgccggc
gtcgatacgctgttctactgccgcgaccacgccctggtgcatgccaccgcgcaggaagtg
ctggatgaatcccgcacgtttacctggagccggcagcacccgcagcaagcccacgtagcc
gttaccgtagccgaagccagtgccgaccgcaccgtggtacacgtggcgctggaccgcccc
ctgccccaggaatacacgttcacggtgcccttcgccgacgagccctccctggaaaatgcg
ctgcacgttctcacggtactgctctggctgcaggtgccggccactgaaattcagcaccgc
ctggataggctacaccccgtggccatgcgcctggaaatgaagcaggccctgaacgattgc
tacattctggacgacacctacaacaacgacctggccggcctctcgctggcgctggacatg
ctggcccgccagccgcgtcggggtcgccgcagcctcattctgtctgatttgctgcaatcc
gggttgcctgcggccgaactgtacgcccgggtggccacgcagctggctacgcaccaggta
gagcgcctgctgggcgtggggcccgatatcagtgcccacgccgccgcctttcccggcata
gataaggagttttttgccgataccgaggaattcctggcgcgagtgcgccccgagcagttt
cgccacgaaaccatcttggtaaaaggcgcccgccggtttggctttgagcggattgtggcc
gcgtttcagcagaaaattcatggcaccgtgctggaggtgaactttgatgccctggtgcac
aacctcaacttttaccgctcccgcctgcagcccggcacccggctgatggtaatggtgaag
gcttttgcctacggcagcggcagctacgaagtggccaacctgctgcagtttcaccgcgcc
gactacctggccgtggcttacaccgatgaaggcgtggcgctgcgggagcagggcatcagc
ctgccgctgatggtgatgaacccctcgcccgacagcttccagaaaatgcagcagtaccat
ctggagcccgaaatctattcgtttgaagtattgcagcaatacctgcaggtggccgctgaa
cagccattgccggccgttcatttaaagctggataccggcatgcgccgcctgggttttgcc
gaagaagatatgccgcagctgtgcgccctgctgcgcgccaacgcgggccggctgcgcgtg
gccagtgccctcacgcacctggccggcgccgacgaagagcagcacaatagcttttctcag
gagcaactggcggcctttagtcgcatgacgccgctggtggaagccgccctgggctattcc
atcatcaagcacgcgcttaactcagccggcattctgcgctttccgcaggctcattttgat
atggtacggctgggcatcgggctgtatggcgtggaggccaccgggcaggagcaggaagcc
ttgcgccccgttagcaccctgcgtaccaccgtttctcaggtgaagacgctggccgcgggg
caaacggtggggtatggccggcgcggctccgccactgcccacaaccgccgcatagccacc
ctggccattggctacgccgatggctacgaccggcgctttggtaacgggggcggggaggtt
atcatccgcgggcagcgggcgcccattgttggcaacgtctgcatggatatgtgcatggcc
gacgtaacccatattgccggcgcccaggccggcgacaccgccgaggtatttgggccaggc
atcacgctgctggagctggccaaccgaattggcactattccttatgagttgctgaccaac
gtgagtgagcgggtgaaacgggtgttttacgcggaataa
DBGET
integrated database retrieval system