Hymenobacter sp. DG25B: PK28_06465
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Entry
PK28_06465 CDS
T03500
Name
(GenBank) recombinase RecR
KO
K06187
recombination protein RecR
Organism
hyd
Hymenobacter sp. DG25B
Pathway
hyd03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
hyd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
PK28_06465
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hyd03400
]
PK28_06465
DNA repair and recombination proteins [BR:
hyd03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
PK28_06465
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
PK28_06465
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Toprim_4
RecR_HhH
RecR_C
Toprim
RecR_ZnF
HHH_5
HHH
PHF5
IMS_HHH
HHH_8
Motif
Other DBs
NCBI-ProteinID:
AIZ63424
UniProt:
A0A0A7LJR0
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Position
1508697..1509311
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AA seq
204 aa
AA seq
DB search
MEFPSKLIENAVGELAKLPGIGKKTALRLALHLLKAETDATASLAEALAKMRFDIRYCDT
CHNISDTEKCGICANPLRDHSTVCVVSDIRDVIAIENTGQYQGTYHVLGGVISPIEGIGP
SDLQIESLVERLGEPESEVKEVILAISPTMEGDTTAFFLSRKLRDFPQVHISTIARGVPM
GGELEYADEITLGRSIVERQRQAK
NT seq
615 nt
NT seq
+upstream
nt +downstream
nt
atggaattcccctccaaactgatagaaaacgccgtgggcgagctggcgaagctgcccggt
atcggcaaaaaaaccgctctgcggctggccctgcacctgctgaaggcagaaaccgacgct
acggcttccctggctgaagcgctggctaaaatgcgcttcgatattcgctactgcgacacc
tgccacaacatctccgacacggagaaatgcggcatctgcgccaacccgctccgcgaccat
agcaccgtgtgcgtggtgtcggatattcgggatgtcattgccattgaaaacaccggccag
taccagggtacctaccacgtgctgggcggcgttatttcgcctattgaaggcattggcccc
agcgacctgcagattgagtctttggtagagcgtttgggcgagccggagtcggaggtgaag
gaagtaatcctggccattagccccaccatggagggcgacaccaccgccttctttctgtcc
cgcaagctgcgcgacttcccgcaggtgcacatcagcaccattgcccgcggcgtgcctatg
ggcggcgagctggaatacgccgatgaaattacgctgggccgctccattgtagagcgccag
cgccaagctaaatag
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