KEGG   Hymenobacter sp. DG25B: PK28_08505
Entry
PK28_08505        CDS       T03500                                 
Name
(GenBank) signal recognition particle
  KO
K03106  signal recognition particle subunit SRP54 [EC:3.6.5.4]
Organism
hyd  Hymenobacter sp. DG25B
Pathway
hyd02024  Quorum sensing
hyd03060  Protein export
hyd03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:hyd00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03060 Protein export
    PK28_08505
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    PK28_08505
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    PK28_08505
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:hyd02044]
    PK28_08505
Enzymes [BR:hyd01000]
 3. Hydrolases
  3.6  Acting on acid anhydrides
   3.6.5  Acting on GTP to facilitate cellular and subcellular movement
    3.6.5.4  signal-recognition-particle GTPase
     PK28_08505
Secretion system [BR:hyd02044]
 Sec (secretion) system
  Prokaryotic Sec-SRP core components
   PK28_08505
  Eukaryotic Sec-SRP protein
   PK28_08505
SSDB
Motif
Pfam: SRP54 SRP_SPB SRP54_N AAA_22 AAA_16 CbiA nSTAND3 AAA_30 Zeta_toxin AAA_17 cobW ParA APS_kinase ABC_tran ATP_bind_1 KAP_NTPase CLP1_P AAA_31 DO-GTPase1 ATPase KTI12 AAA_14 AAA_5 NACHT AAA_33 AAA_18 MMR_HSR1 PIF1 AAA AAA_24 T2SSE NTPase_1 ResIII Pox_A32 GTP_EFTU AAA_25 TsaE
Other DBs
NCBI-ProteinID: AIZ63725
UniProt: A0A0A7LKF6
LinkDB
Position
1998317..1999666
AA seq 449 aa
MFDNLSTKLDKAFKTLKGQGSITEINVAATVKEIRRALVDADVNYKVAKDVTDKIKDEAM
GRDVLISVSPGQLLTKIVYDELTQLMGGEKQDIVIKGDPAVVLLSGLQGSGKTTFAGKLA
SFIKKQNRTVLLVACDVYRPAAIDQLKVLGEQIGVEVYSEPENKNPVSISQNAIEFAKKN
NKKVVIIDTAGRLAVDEQMMREIEAVKRAINPSETLFVVDSMTGQDAVNTAKTFNDRLNF
DGVVLTKLDGDSRGGAALSIRAVVEKPIKFISTGEKMEALDMFYPDRMAQRILGMGDVIS
LVERAQQQFDEEEAKRINQKIRKNQFNFDDFLSQLEQIKKMGNLKDLVGMIPGMSKAIKE
VDIDDDAFKPIEAIIKSMTAQERANPDLLNGSRRRRLAKGSGTDIQQVNNLMKQFEDMRK
VMRTMNKMSQSKGGMLQMARMMGMRGGMR
NT seq 1350 nt   +upstreamnt  +downstreamnt
atgttcgataacctcagtaccaagttagataaggccttcaaaacgctgaaaggccagggc
agcatcaccgaaatcaacgtagccgccacggtaaaggaaatccgccgggcgctggtggat
gccgacgtgaactacaaggtggccaaagacgtcaccgacaagattaaggacgaggccatg
ggccgcgacgtgctcatcagcgtgtcgccgggccagctgctcaccaaaatcgtgtacgat
gagctgacccagctgatgggcggcgaaaaacaggatatcgttattaaaggcgacccggcc
gtagtgctgctgtcgggtctgcagggctcaggtaaaaccaccttcgccggtaagctggcc
agcttcatcaaaaagcagaaccgcaccgtgctgctggtggcctgcgacgtgtaccgcccc
gccgctattgaccagctgaaagtgctgggcgagcagattggcgtggaagtgtactcggag
ccggaaaataaaaatccggtttctatctcgcagaacgccattgagtttgcgaaaaagaat
aacaagaaggtagtcatcattgacaccgccggccgcctggccgtagacgagcagatgatg
cgcgagattgaggccgtgaagcgcgccatcaacccctcggaaacgctgtttgtagtagac
tccatgacgggtcaggacgccgtgaacacggccaagacctttaatgaccggctgaacttc
gacggcgtcgtcctcaccaagctcgacggtgactcgcgtggtggtgcggcgctgtctatc
cgggcggtagtggagaaacccatcaagttcatctccaccggtgaaaagatggaagcgctg
gacatgttctaccccgaccgcatggcccagcgtattctgggcatgggcgacgttatttcg
ctggtagagcgcgcccaacagcagttcgacgaggaagaagccaagcgcatcaaccagaaa
atccgcaaaaaccagttcaacttcgatgacttcctctcccagctggagcagatcaagaag
atgggcaacctgaaggatctggtgggcatgattcccggtatgagcaaggccatcaaggaa
gtggatattgatgatgatgccttcaagcccattgaggccattattaaaagcatgactgcg
caggagcgggctaaccccgatctgctgaacggctcgcgccgccgtcgcctggctaaaggc
tcaggcaccgatattcagcaggtaaacaacctgatgaagcagtttgaggacatgcgcaaa
gtgatgcgcaccatgaacaagatgagtcagagcaagggcggtatgctgcaaatggcccgc
atgatgggtatgcgtggcggaatgcggtaa

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