Hydrogenophaga crassostreae: LPB072_20900
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Entry
LPB072_20900 CDS
T04505
Name
(GenBank) D-alanine--D-alanine ligase
KO
K01921
D-alanine-D-alanine ligase [EC:
6.3.2.4
]
Organism
hyl
Hydrogenophaga crassostreae
Pathway
hyl00470
D-Amino acid metabolism
hyl00550
Peptidoglycan biosynthesis
hyl01100
Metabolic pathways
hyl01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
hyl00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
LPB072_20900
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
LPB072_20900
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
LPB072_20900
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
hyl01011
]
LPB072_20900
Enzymes [BR:
hyl01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.4 D-alanine---D-alanine ligase
LPB072_20900
Peptidoglycan biosynthesis and degradation proteins [BR:
hyl01011
]
Precursor biosynthesis
Amino acid ligase
LPB072_20900
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Dala_Dala_lig_C
Dala_Dala_lig_N
ATP-grasp_3
ATPgrasp_ST
ATP-grasp
GARS_A
TTL
RimK
Motif
Other DBs
NCBI-ProteinID:
AOW14911
UniProt:
A0A162P5D4
LinkDB
All DBs
Position
complement(4505866..4506849)
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AA seq
327 aa
AA seq
DB search
MSANTIAAVSINPKAMGKVAVLLGGRSAEREVSLMSGNGVLAALIAKGVDGHAFDPASRD
LSELKREGFDRCFIALHGRFGEDGTVQGALELMGIPYTGPGVMSSSVAMDKLMTKRIWIA
EGLATPAWRQVKSPAETRAAFAELGSPMIVKPVREGSTIGLTKVTALEQCDAAYSLASGQ
DPMVMCEQFIAGDEVTIPVLGTGVEARALPVIRIVAPDGNYDYQNKYFTDDTKYLVPCGL
PEGEEERIQALVLKAFLTLDCRGWARADVMIDGKTRKPYLLEINTSPGMTGHSLVPMSAR
AAGLSYEDLCLTLLASASLDNATQPNG
NT seq
984 nt
NT seq
+upstream
nt +downstream
nt
atgagcgcaaacaccatcgcagctgtgtctatcaaccccaaagccatgggcaaggttgcc
gtcctgttgggcggccggtccgccgagcgtgaggtttccctgatgtcgggcaatggcgtg
ctggcggccctgatcgccaagggggtggacgggcatgccttcgatccggcatcacgcgac
ctgagtgagctcaagcgcgagggtttcgaccgttgtttcatcgcgctgcatggccgcttc
ggtgaggatggcactgtgcaaggtgcgcttgaactcatgggtattccgtacaccgggccg
ggcgtcatgtcctcgagcgtggcgatggacaaactcatgaccaagcgcatctggatagcc
gaaggtctggcgacgcccgcatggcgtcaggtgaaaagcccagccgaaacgagggcggcc
tttgcggagctgggctcacccatgatcgtcaagccggtgcgcgagggttcaacgattggc
ctcaccaaagtcactgcactggagcagtgcgatgccgcctattcgctcgcatcgggccag
gatcccatggtgatgtgtgaacagttcattgctggtgatgaagtgaccattcctgtcctg
ggaacgggcgttgaggcccgggctttgccagtgatccggatcgtcgcgcccgacggcaat
tacgactaccagaacaaatacttcactgacgatacgaaatacctcgtgccctgcggcttg
cccgagggcgaagaagagcgcattcaggccctggtcttgaaggcgtttctcacgctggac
tgccgcggctgggcacgtgccgacgtgatgatcgacggcaagacgcgcaagccgtatttg
ctggagatcaacacctcgccaggcatgacaggtcattcgctggtgcccatgtcggcccgc
gcggccggtctgtcgtatgaagacctctgtttgactctgttggccagtgcttcgctggac
aacgccacacaacccaacggctga
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