KEGG   Hymenobacter sp. APR13: N008_06305
Entry
N008_06305        CDS       T03213                                 
Name
(GenBank) hypothetical protein
  KO
K01798  Alr-MurF fusion protein [EC:5.1.1.1 6.3.2.10]
Organism
hym  Hymenobacter sp. APR13
Pathway
hym00300  Lysine biosynthesis
hym00470  D-Amino acid metabolism
hym00550  Peptidoglycan biosynthesis
hym01100  Metabolic pathways
hym01502  Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:hym00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00300 Lysine biosynthesis
    N008_06305
  09106 Metabolism of other amino acids
   00470 D-Amino acid metabolism
    N008_06305
  09107 Glycan biosynthesis and metabolism
   00550 Peptidoglycan biosynthesis
    N008_06305
 09160 Human Diseases
  09175 Drug resistance: antimicrobial
   01502 Vancomycin resistance
    N008_06305
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01011 Peptidoglycan biosynthesis and degradation proteins [BR:hym01011]
    N008_06305
Enzymes [BR:hym01000]
 5. Isomerases
  5.1  Racemases and epimerases
   5.1.1  Acting on amino acids and derivatives
    5.1.1.1  alanine racemase
     N008_06305
 6. Ligases
  6.3  Forming carbon-nitrogen bonds
   6.3.2  Acid-D-amino-acid ligases (peptide synthases)
    6.3.2.10  UDP-N-acetylmuramoyl-tripeptide---D-alanyl-D-alanine ligase
     N008_06305
Peptidoglycan biosynthesis and degradation proteins [BR:hym01011]
 Precursor biosynthesis
  Amino acid ligase
   N008_06305
  Racemase
   N008_06305
SSDB
Motif
Pfam: Ala_racemase_N Ala_racemase_C Mur_ligase_M Mur_ligase Mur_ligase_C
Other DBs
NCBI-ProteinID: AII51594
UniProt: A0A076HVF3
LinkDB
Position
complement(1466009..1468507)
AA seq 832 aa
MLDFSADLPALTSGTLLLTPPAPAPVQTLLLDSRRVGQAGGSVFFALRGPQHNGHRYLPE
LYQQGVRLFVVDSEVDIPGGLLAYPGSGFLLVPQVLDALQAVAAAHRRQFRLPVLGITGS
NGKTIVKEWLAQLLAPEERICKSPRSYNSQVGVPLSVWELNARHTLGVFEAGVSEPGEMA
RLAAVIQPTLGLFTNLGTAHDAGFASHQQKVEEKMQLFRDVDTLFYCLDHQIIHEAAQRL
LPAHRTFTWSRQHPHLAHVAVTVAEASADRTVVRVTLARPVPQEHTFTLPFADEPSVENA
LHALSVLLWQQVPAAEIQHRLDRLQPVAMRLEMKQALNDCYVLDDTYNNDLAGLALALDA
LTRQLQRGRRTLILSDVLESGLAGPDLYARVAALLRTHGVARLVGIGPEIRLHQGAFDGI
EAVFYDTTEDFLRHFQPDTFRRETILVKGARRFGFERIVAAFQQKIHGTVLEVNLDALAH
NLNFYRRRLQPGTRLMVMVKAFAYGSGSSEVANLLQFHRADYLAVAYTDEGVDLRQHGIS
LPIMVMNPSPDAFQKLRQYQLEPEIYSFERLHDYLRAAREQPLPPIHLKLDTGMRRLGFA
ETDLPELTRLLRENAAHLRVASALTHLAGADEEQHNDFSRQQLAAFHRMTPVLEAVLGYP
ILKHALNSAGILRFPAAHADMVRLGIGLYGVEASGQEPDALQPVSTLRTTVSQVKALPPG
ETVGYGRRGQAADFERRIATLAIGYADGYDRRFGNGAGEVVIRGQRAPIVGNVCMDMCMA
DVTHISGAQAGDAAEIFGPSLPLPELAARIGTIPYELLTNVSERVKRVFVAE
NT seq 2499 nt   +upstreamnt  +downstreamnt
atgctcgatttctctgccgacctgcccgccctcaccagtggcaccctgctgctgactccg
cccgcccccgcgcccgtccagaccttgctgctggacagccgccgcgtgggtcaggccggc
ggcagcgtgttctttgcgctgcgcggaccccagcacaacggccaccgctacctgcccgag
ctctaccagcagggcgtgcgcctgtttgtggtggatagcgaagtcgatattcccggcggg
ctgctggcctaccccggcagcggctttctgctggtgccgcaggtgctggacgcgctgcag
gccgtggctgccgcccaccgccgccagtttcggctgcccgtgctgggcatcaccggctcc
aacggcaaaaccatcgtgaaggagtggctcgcgcagctgctggctcccgaggaacgcatc
tgcaaaagcccacgctcctacaactcgcaggtgggtgtgccgctgagcgtgtgggagctg
aacgcccgccacacgctgggtgtcttcgaagccggcgtgtcggagcccggcgaaatggcg
cggctggcggccgtaatccagcccacgctgggcttgttcaccaacctgggcaccgcccac
gacgccggctttgcctcccatcagcagaaagtggaagagaagatgcagctgttccgcgac
gtggatacgctgttctactgcctcgaccaccagatcattcacgaagctgcccaacgcctg
ctgcccgcgcaccgcaccttcacctggagccgccagcacccgcacctggcccacgtggcc
gtgacggtggccgaggccagcgccgaccgcaccgtggtgcgcgtaacgctggcccggccc
gtgccgcaggagcacaccttcactctgcccttcgccgacgagcccagcgtggaaaatgcc
ctgcacgcgctgtcggtgctgctgtggcagcaggtgcccgccgccgaaatccagcaccgc
ctcgataggctgcagcccgtggccatgcgcctggagatgaagcaggccctcaacgactgc
tacgtcctcgacgacacctacaacaacgacctcgccggcctcgccctggccctcgacgcc
ctcacgcgccagctgcagcgcggccgccgcaccctcatcctctccgacgtgctcgaatcc
ggcctcgccggccccgacctctacgcccgcgtggccgccttgctgcgcacccacggcgtg
gcgcgtctcgttggcatcggccccgaaatccgcctgcaccaaggcgcttttgatgggata
gaggctgtgttttacgataccaccgaggactttctgcgccacttccagcccgacaccttc
cgccgcgaaaccattttggtgaagggggcgcgccgctttggcttcgagcggattgtggcg
gcgtttcagcagaaaatccacggcacggtgctggaagtcaacctcgatgcgctggcccac
aacctcaacttctaccgccgccgcctgcagcccggcacccgcctcatggtgatggtgaag
gccttcgcgtacggcagcggctcctccgaagtcgccaacctgctgcagttccaccgcgcc
gactacctggccgtggcctacaccgacgaaggcgtggacctacgccagcacggcatcagc
ctgcccatcatggtgatgaacccctcgccggatgccttccagaagctgcgccagtaccag
ctggagcccgaaatctactccttcgagcgtctgcacgactacctgcgcgccgcccgcgag
cagccgttgccgcccatccacctcaagctcgataccggcatgcgccgcctcggcttcgcc
gaaaccgacttgcccgagctgacccgactgctgcgcgaaaacgctgcccatctgcgcgtg
gccagcgccctcacccacttggccggcgccgacgaagagcagcacaacgacttctcgcgg
cagcagctggccgccttccaccgcatgacgccggtgctggaagccgtgctcggctacccc
attctcaagcacgcgctcaactcggccggcatcctgcgcttcccggccgcccacgccgat
atggtgcgcctcggcatcgggctgtatggggtagaagccagcggccaggagcccgacgcc
ctgcagcccgtgagcacgctgcgcaccaccgtgtcgcaggtgaaagcgctgccgcccggc
gaaaccgtcggctacggccgccgcggccaggccgccgacttcgagcggcgcattgccacg
ctggccatcggctacgccgacggctacgaccggcgcttcggcaacggcgcgggcgaggtg
gttatccggggccagcgcgcgcccatcgtcggcaacgtgtgcatggacatgtgcatggcc
gacgtcacgcacatcagcggcgcccaggccggcgacgcggccgaaatcttcggccccagc
ctgccgctgcccgagctggcggctcgcattggcaccattccgtatgagctgctgaccaac
gtaagcgagcgggtgaagcgcgtatttgtggccgaataa

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