Hymenobacter sp. APR13: N008_06305
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Entry
N008_06305 CDS
T03213
Name
(GenBank) hypothetical protein
KO
K01798
Alr-MurF fusion protein [EC:
5.1.1.1
6.3.2.10
]
Organism
hym
Hymenobacter sp. APR13
Pathway
hym00300
Lysine biosynthesis
hym00470
D-Amino acid metabolism
hym00550
Peptidoglycan biosynthesis
hym01100
Metabolic pathways
hym01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
hym00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
N008_06305
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
N008_06305
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
N008_06305
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
N008_06305
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
hym01011
]
N008_06305
Enzymes [BR:
hym01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.1 alanine racemase
N008_06305
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.10 UDP-N-acetylmuramoyl-tripeptide---D-alanyl-D-alanine ligase
N008_06305
Peptidoglycan biosynthesis and degradation proteins [BR:
hym01011
]
Precursor biosynthesis
Amino acid ligase
N008_06305
Racemase
N008_06305
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ala_racemase_N
Ala_racemase_C
Mur_ligase_M
Mur_ligase
Mur_ligase_C
Motif
Other DBs
NCBI-ProteinID:
AII51594
UniProt:
A0A076HVF3
LinkDB
All DBs
Position
complement(1466009..1468507)
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AA seq
832 aa
AA seq
DB search
MLDFSADLPALTSGTLLLTPPAPAPVQTLLLDSRRVGQAGGSVFFALRGPQHNGHRYLPE
LYQQGVRLFVVDSEVDIPGGLLAYPGSGFLLVPQVLDALQAVAAAHRRQFRLPVLGITGS
NGKTIVKEWLAQLLAPEERICKSPRSYNSQVGVPLSVWELNARHTLGVFEAGVSEPGEMA
RLAAVIQPTLGLFTNLGTAHDAGFASHQQKVEEKMQLFRDVDTLFYCLDHQIIHEAAQRL
LPAHRTFTWSRQHPHLAHVAVTVAEASADRTVVRVTLARPVPQEHTFTLPFADEPSVENA
LHALSVLLWQQVPAAEIQHRLDRLQPVAMRLEMKQALNDCYVLDDTYNNDLAGLALALDA
LTRQLQRGRRTLILSDVLESGLAGPDLYARVAALLRTHGVARLVGIGPEIRLHQGAFDGI
EAVFYDTTEDFLRHFQPDTFRRETILVKGARRFGFERIVAAFQQKIHGTVLEVNLDALAH
NLNFYRRRLQPGTRLMVMVKAFAYGSGSSEVANLLQFHRADYLAVAYTDEGVDLRQHGIS
LPIMVMNPSPDAFQKLRQYQLEPEIYSFERLHDYLRAAREQPLPPIHLKLDTGMRRLGFA
ETDLPELTRLLRENAAHLRVASALTHLAGADEEQHNDFSRQQLAAFHRMTPVLEAVLGYP
ILKHALNSAGILRFPAAHADMVRLGIGLYGVEASGQEPDALQPVSTLRTTVSQVKALPPG
ETVGYGRRGQAADFERRIATLAIGYADGYDRRFGNGAGEVVIRGQRAPIVGNVCMDMCMA
DVTHISGAQAGDAAEIFGPSLPLPELAARIGTIPYELLTNVSERVKRVFVAE
NT seq
2499 nt
NT seq
+upstream
nt +downstream
nt
atgctcgatttctctgccgacctgcccgccctcaccagtggcaccctgctgctgactccg
cccgcccccgcgcccgtccagaccttgctgctggacagccgccgcgtgggtcaggccggc
ggcagcgtgttctttgcgctgcgcggaccccagcacaacggccaccgctacctgcccgag
ctctaccagcagggcgtgcgcctgtttgtggtggatagcgaagtcgatattcccggcggg
ctgctggcctaccccggcagcggctttctgctggtgccgcaggtgctggacgcgctgcag
gccgtggctgccgcccaccgccgccagtttcggctgcccgtgctgggcatcaccggctcc
aacggcaaaaccatcgtgaaggagtggctcgcgcagctgctggctcccgaggaacgcatc
tgcaaaagcccacgctcctacaactcgcaggtgggtgtgccgctgagcgtgtgggagctg
aacgcccgccacacgctgggtgtcttcgaagccggcgtgtcggagcccggcgaaatggcg
cggctggcggccgtaatccagcccacgctgggcttgttcaccaacctgggcaccgcccac
gacgccggctttgcctcccatcagcagaaagtggaagagaagatgcagctgttccgcgac
gtggatacgctgttctactgcctcgaccaccagatcattcacgaagctgcccaacgcctg
ctgcccgcgcaccgcaccttcacctggagccgccagcacccgcacctggcccacgtggcc
gtgacggtggccgaggccagcgccgaccgcaccgtggtgcgcgtaacgctggcccggccc
gtgccgcaggagcacaccttcactctgcccttcgccgacgagcccagcgtggaaaatgcc
ctgcacgcgctgtcggtgctgctgtggcagcaggtgcccgccgccgaaatccagcaccgc
ctcgataggctgcagcccgtggccatgcgcctggagatgaagcaggccctcaacgactgc
tacgtcctcgacgacacctacaacaacgacctcgccggcctcgccctggccctcgacgcc
ctcacgcgccagctgcagcgcggccgccgcaccctcatcctctccgacgtgctcgaatcc
ggcctcgccggccccgacctctacgcccgcgtggccgccttgctgcgcacccacggcgtg
gcgcgtctcgttggcatcggccccgaaatccgcctgcaccaaggcgcttttgatgggata
gaggctgtgttttacgataccaccgaggactttctgcgccacttccagcccgacaccttc
cgccgcgaaaccattttggtgaagggggcgcgccgctttggcttcgagcggattgtggcg
gcgtttcagcagaaaatccacggcacggtgctggaagtcaacctcgatgcgctggcccac
aacctcaacttctaccgccgccgcctgcagcccggcacccgcctcatggtgatggtgaag
gccttcgcgtacggcagcggctcctccgaagtcgccaacctgctgcagttccaccgcgcc
gactacctggccgtggcctacaccgacgaaggcgtggacctacgccagcacggcatcagc
ctgcccatcatggtgatgaacccctcgccggatgccttccagaagctgcgccagtaccag
ctggagcccgaaatctactccttcgagcgtctgcacgactacctgcgcgccgcccgcgag
cagccgttgccgcccatccacctcaagctcgataccggcatgcgccgcctcggcttcgcc
gaaaccgacttgcccgagctgacccgactgctgcgcgaaaacgctgcccatctgcgcgtg
gccagcgccctcacccacttggccggcgccgacgaagagcagcacaacgacttctcgcgg
cagcagctggccgccttccaccgcatgacgccggtgctggaagccgtgctcggctacccc
attctcaagcacgcgctcaactcggccggcatcctgcgcttcccggccgcccacgccgat
atggtgcgcctcggcatcgggctgtatggggtagaagccagcggccaggagcccgacgcc
ctgcagcccgtgagcacgctgcgcaccaccgtgtcgcaggtgaaagcgctgccgcccggc
gaaaccgtcggctacggccgccgcggccaggccgccgacttcgagcggcgcattgccacg
ctggccatcggctacgccgacggctacgaccggcgcttcggcaacggcgcgggcgaggtg
gttatccggggccagcgcgcgcccatcgtcggcaacgtgtgcatggacatgtgcatggcc
gacgtcacgcacatcagcggcgcccaggccggcgacgcggccgaaatcttcggccccagc
ctgccgctgcccgagctggcggctcgcattggcaccattccgtatgagctgctgaccaac
gtaagcgagcgggtgaagcgcgtatttgtggccgaataa
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