Hymenobacter sp. APR13: N008_10005
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Entry
N008_10005 CDS
T03213
Name
(GenBank) hypothetical protein
KO
K00164
2-oxoglutarate dehydrogenase E1 component [EC:
1.2.4.2
]
Organism
hym
Hymenobacter sp. APR13
Pathway
hym00020
Citrate cycle (TCA cycle)
hym00785
Lipoic acid metabolism
hym01100
Metabolic pathways
hym01110
Biosynthesis of secondary metabolites
hym01120
Microbial metabolism in diverse environments
hym01200
Carbon metabolism
hym01210
2-Oxocarboxylic acid metabolism
Module
hym_M00009
Citrate cycle (TCA cycle, Krebs cycle)
hym_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
Brite
KEGG Orthology (KO) [BR:
hym00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
N008_10005
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
N008_10005
Enzymes [BR:
hym01000
]
1. Oxidoreductases
1.2 Acting on the aldehyde or oxo group of donors
1.2.4 With a disulfide as acceptor
1.2.4.2 oxoglutarate dehydrogenase (succinyl-transferring)
N008_10005
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
E1_dh
OxoGdeHyase_C
Transket_pyr
2-oxogl_dehyd_N
Motif
Other DBs
NCBI-ProteinID:
AII52308
UniProt:
A0A076HT63
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All DBs
Position
2350891..2353740
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AA seq
949 aa
AA seq
DB search
MDANSYIANAHGDYLDNLYQSYKADPQSVDASWQKFFEGFDFAQQYPEDGMPQADGEGVL
TTSASTNQAGAVRAVDTVAADKETQVRNLIHAYRSRGHLVAKTNPVRERKDRKARLSIAD
FGLSDADLDTKFKNGEVLGLGSEATLREIVAALQKVYTRTIGFEYMYIRDPQVLDWFREK
VEKDSLSFNPGVEYKKRILKKLNEAVVFENFLHTKFLGQKRFSLEGGESTIPALDAIINK
ASELGVQEVMIGMAHRGRLNVLANIMGKTYEQIFSEFEGTAVPDLTMGDGDVKYHMGYSS
EVEAEGGQKVNLKLAPNPSHLEAVNPVVEGFVRAKIEHQYGGDYHQILPILIHGDAALAG
QGIGYELTQMSLLEGYRTGGTLHFVINNQVGFTTDFEDARSSIYSTDLAKIIDAPVLHVN
GDDPEAVVFAVRLATEYRQQFHADIFIDMVCYRRHGHNESDEPKFTQPTLYNLISKHQNP
REVYNAMLVQRGDVDAQLAQQMDKEFRDTLQARLDMVKQKPLPYNYQPLENEWRTLRRSK
PEDFEKSPETGISEEVVAKVGKALTTLPEGFRPLKQIEKLMEERKKMFFETRMLNWAAGE
LLAYGSLLDEKHIVRVSGQDVQRGTFSHRHAVLHDAETSAPYNSLNYIGEGQEKLSIYNS
LLSEYAVLGFEFGYAMANPTALVIWEAQFGDFANGAQTMIDQFIVSSESKWQRMNGVVLQ
LPHGYEGQGPEHSNARPERFLQLAAENNIIVANMTTPANFFHALRRQLTWEFRKPLVVMS
PKSMLRHPLCVSPVEEFTSGHFREVLGDVYADAKKVKRVLLCSGKVYFDLLDEQQQSGRT
DVAIVRLEQLHPFPKKQLDAELAKYPKAKLYWVQEEPENMGYWNYLLRFMRRELEDVISR
KPSASPATGYNKVHVKEQKDLVARAFDKPKEAVADDNIKATAEVAKKQD
NT seq
2850 nt
NT seq
+upstream
nt +downstream
nt
atggacgccaactcttatatcgccaacgcccacggcgactacctcgacaacctgtaccag
tcttacaaggccgacccgcagtcggtggatgcgagctggcagaaattctttgaaggcttc
gacttcgcccagcagtaccccgaggacgggatgccgcaggccgatggcgaaggcgtgctg
accacctcggccagcaccaaccaggccggcgccgttcgggccgtggacacggtggccgcc
gacaaggaaacgcaggtacgcaacctgattcacgcctaccgcagccgcggccacttggtg
gccaaaaccaacccggtgcgcgagcggaaggaccgtaaggcccgcctcagcattgccgac
ttcggcctgagcgacgccgacctcgataccaaattcaagaacggtgaagtgctgggcctg
ggctcggaagccacgctgcgcgagattgtggctgccttgcagaaggtgtacacccgcacc
atcggcttcgagtacatgtacatccgcgacccgcaggtgctcgactggttccgtgagaaa
gtggagaaggactcgctgagcttcaaccccggcgtggagtacaagaagcgcatcctcaaa
aagctgaatgaggctgtagtgttcgagaacttcctgcatacgaagttcctgggccagaag
cgcttctcgctggaaggtggcgaatcgaccattccggccctcgacgctattattaataag
gcttcggagctgggcgtacaggaagtgatgattggcatggcccaccgcggccgtctgaac
gtgctggccaacataatgggcaaaacctacgagcagattttctcggaattcgagggaact
gccgtacctgacctgaccatgggcgacggcgacgtgaagtaccacatgggctactcgtcg
gaggtggaagctgagggcggccagaaggtgaacctgaagctggcccccaacccctcgcac
ctggaggcggtgaaccccgtggtggaaggcttcgtgcgcgccaagattgagcaccagtat
ggcggcgactaccaccagattctgcccatcctcatccacggcgacgcggctttggccggc
cagggcatcggttacgagctgacccagatgtcgttgctggaaggctaccgcaccggtggc
acgctgcacttcgtgattaacaaccaggtgggcttcaccaccgatttcgaggacgcccgc
tcttcaatttacagcaccgacctcgccaaaattatcgatgcgccggtgctgcacgtgaac
ggcgacgaccccgaagccgtggtgtttgccgtgcgcctcgccaccgagtaccgccagcag
ttccacgccgatatcttcattgatatggtgtgctaccgccgccacggccataacgagtcg
gacgagcccaagttcacccagcccaccctctataacctcatcagcaagcaccagaacccc
cgcgaggtgtacaacgccatgctggtgcagcgcggcgacgtggacgcgcagctggcccag
cagatggacaaggagttccgcgacaccctgcaggcccgcctggacatggtgaagcagaag
ccgctgccctacaactaccagcccctcgaaaacgagtggcgcaccctgcgccgcagcaag
cccgaggacttcgagaagtcgccggaaacgggcatcagcgaggaagtggtggccaaagtt
ggcaaggccctgactacgctgcccgaaggcttccgccccctgaagcagattgaaaagctg
atggaggagcgcaagaagatgttcttcgagacgcgcatgctgaactgggccgccggcgag
ctgctggcctacggctccttgctcgacgagaagcacattgtgcgcgtgagcggccaggac
gtgcagcgcggcacgttctcgcaccgccacgccgtactgcacgacgccgaaacctcggcc
ccgtacaactcgctcaactacattggcgaaggccaggagaagctgagcatctacaactcg
ctgctgagcgagtacgcggtgctgggcttcgaattcggctacgccatggccaaccccacg
gccctggtaatctgggaagcccagttcggcgacttcgccaacggtgcccagaccatgatt
gaccagttcatcgtgtcgtcggaaagcaagtggcagcgcatgaacggcgtggtgctgcag
ctgccccacggctacgaaggccagggccccgagcactccaacgcccgccccgagcggttc
ctgcagctggccgcagagaacaacatcatcgtggccaacatgaccacgccggccaacttc
ttccacgcgctgcgccggcagctgacctgggagttccgcaagccgctggtggtgatgtcg
ccgaagtcgatgctgcgccacccgctgtgcgtgtcgccggtggaggagttcacctccggc
cacttccgcgaggtgctcggcgacgtgtacgctgacgccaagaaggtgaagcgcgtgctg
ctgtgctcgggcaaagtgtacttcgatttgctggacgagcagcagcagtcgggccgcacc
gacgtggctattgtgcgcctcgagcagttgcaccccttccccaagaagcagctcgacgcc
gagctggccaagtaccccaaagccaagctgtactgggtgcaggaagagcccgagaacatg
ggctactggaactacctgctgcgctttatgcgccgcgagctggaagatgtgatttcgcgc
aagccctcggcctcgccggctaccggctacaacaaggtgcacgtgaaggagcagaaggac
ctcgtggcccgcgccttcgacaagcccaaggaagccgtggccgacgacaacatcaaagcc
accgccgaagtagccaagaagcaggactag
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