Hymenobacter sp. APR13: N008_12025
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Entry
N008_12025 CDS
T03213
Symbol
ruvB
Name
(GenBank) Holliday junction DNA helicase RuvB
KO
K03551
holliday junction DNA helicase RuvB [EC:
5.6.2.4
]
Organism
hym
Hymenobacter sp. APR13
Pathway
hym03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
hym00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
N008_12025 (ruvB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hym03400
]
N008_12025 (ruvB)
Enzymes [BR:
hym01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
N008_12025 (ruvB)
DNA repair and recombination proteins [BR:
hym03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
N008_12025 (ruvB)
RecFOR pathway proteins
N008_12025 (ruvB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuvB_N
AAA_lid_4
RuvB_C
AAA
AAA_5
AAA_16
AAA_3
AAA_22
Mg_chelatase
nSTAND3
NB-ARC
Bac_DnaA
AAA_14
TIP49
RNA_helicase
bpMoxR
NTPase_1
AAA_PrkA
DUF815
AAA_33
TsaE
NACHT
AAA_18
ABC_tran
Rad17
AAA_19
AAA_24
Torsin
AAA_28
Motif
Other DBs
NCBI-ProteinID:
AII52698
UniProt:
A0A076HUA9
LinkDB
All DBs
Position
2804863..2805912
Genome browser
AA seq
349 aa
AA seq
DB search
MREPFLTGGADHMDATEKDIDKALRPLSFDDFAGQDKVVDNLKVFVAAARRRGDALDHVL
LHGPPGLGKTTLSHIIANELQAGIKMTSGPVLDKPSDLAGLLTNLEPHDVLFIDEIHRLN
PVVEEYLYSAMEDYRIDIMLDSGPNARSVQISLSPFTLIGATTRSGMLTSPLRARFGISS
RLEYYDSKLLTSIVQRSAEILGTPIYEDAAYEIARRSRGTPRIANNLLRRTRDFAQVKGD
GSITMDIAQFALNALDVDARGLDDMDKRILTTIIDKFKGGPVGISTIATACGEEGETIEE
VYEPFLIQEGYIKRTSRGREATEAAYLHLGRAMPQHLRGNTGTTGELFS
NT seq
1050 nt
NT seq
+upstream
nt +downstream
nt
atgcgcgaaccatttctcaccggcggcgccgaccacatggacgccaccgaaaaagacatt
gacaaggcgctgcggccgctttccttcgacgacttcgcgggccaggataaggtggtcgac
aacctgaaggtgtttgtggccgccgcccgccgccgcggcgacgccctcgaccacgtgctg
ctgcacggccctcccggcctcggcaaaactacgctctcgcacatcatcgccaacgagctg
caggctggcatcaaaatgaccagcggcccggtgctcgacaagccctccgacctggccggc
ctgctcaccaacctggagccgcacgacgtgctgttcatcgacgagattcaccgcctcaac
cccgtggtggaagagtacctgtactcggccatggaagactaccgcatcgacatcatgctc
gattcgggcccgaatgcgcggtcggtgcagatttcgttgtcgccgtttacgctgattggc
gcgaccacccgctcgggcatgctcacctcgccgctgcgggcccgcttcggcatcagctcc
cgcctcgaatactacgattccaagctgctgaccagcattgtgcagcgctcggccgaaatt
ctgggcaccccgatttacgaggacgcggcctacgaaattgcgcgccgctcgcgcggtacg
ccgcgtatcgccaacaatctgctgcgtcgcacccgcgactttgctcaggtgaaaggcgac
ggcagcatcacgatggacattgcccagtttgccctcaacgctctcgacgtagacgcccgc
ggcctcgacgacatggacaagcgcatcctgaccaccatcatcgacaagttcaaaggtggg
ccggtgggcatcagcaccattgccacggcttgcggcgaggaaggcgaaactattgaggaa
gtgtacgagccgttcctgattcaggaaggctacatcaagcgcaccagccgcggccgcgag
gccacggaagcggcctacctgcacctgggccgtgccatgccgcagcacctgcgcggcaat
accggcaccaccggcgagctgttctcgtag
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