Hydrogenophaga sp. BPS33: F9K07_27190
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Entry
F9K07_27190 CDS
T06379
Symbol
dacB
Name
(GenBank) D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase
KO
K07259
serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:
3.4.16.4
3.4.21.-]
Organism
hyn
Hydrogenophaga sp. BPS33
Pathway
hyn00550
Peptidoglycan biosynthesis
hyn01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
hyn00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
F9K07_27190 (dacB)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
hyn01002
]
F9K07_27190 (dacB)
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
hyn01011
]
F9K07_27190 (dacB)
Enzymes [BR:
hyn01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
F9K07_27190 (dacB)
Peptidases and inhibitors [BR:
hyn01002
]
Serine peptidases
Family S13: D-Ala-D-Ala peptidase C family
F9K07_27190 (dacB)
Peptidoglycan biosynthesis and degradation proteins [BR:
hyn01011
]
Peptidoglycan biosynthesis and degradation
DD-Carboxypeptidase/DD-Endopeptidase (Low molecular weight PBP)
F9K07_27190 (dacB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_S13
Beta-lactamase2
Motif
Other DBs
NCBI-ProteinID:
QHE88306
UniProt:
A0A6P1J4J8
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All DBs
Position
complement(5870557..5872092)
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AA seq
511 aa
AA seq
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MSTRFLPLRFPFLARLFALWLLACALPACAQMPGRGAGLPPAVAEALKQAQVPASALSAL
VVSVAPDAHERLRHLASAPVNPASVMKLVTTYAALDMLGPDFTWNTRFYTDGVVDNGILR
GNLYVRGGGDPKLVLERIQEAYLALQAKGVRVILGDMVLDHSAFELPFTDPGAFDGEALR
PYNATPDALLVNFKSVILTFVPDVASGVATVISEPPLAGLAIDATVPLSRGACGDWRSTV
RARFDDPDAIRFEGRYPQNCGELKWPVAYQQPASYAARAMEGLWRASGGAITGSVRDGTM
PAEVVLLHETRSLPLSDVIVDVNRWSNNVMAQQVFLTLGQLAVPQTTMARSVVVAAGSAA
DRLVPSRPARFEYSREVVTDWWQRTFGRRVPGPVLENGSGLSRDERVTPEALAALLRHAA
RHPQGMAFVDSLSVVGVNGTAQRLGRGGNSAARGNAYVKTGTLRDVTGIAGYVNALNGSQ
YVVVAFVNHPSAPAARPALDALLAWTAALPD
NT seq
1536 nt
NT seq
+upstream
nt +downstream
nt
atgtcgacacgtttcctgccattgcgattccccttcctcgcgcgcctgttcgcgctgtgg
ctgctcgcctgcgccttgcccgcctgcgcgcagatgccgggacggggtgccggtctgccg
ccggccgtggccgaggcattgaagcaggcccaggtgcccgccagcgcgctttcggcgctg
gtggtgtcggtggcccccgatgcgcacgagcgtttgcgccacctggccagcgcacccgtg
aacccggcgtcggtcatgaaattggtgaccacctatgccgcgctggacatgctcggcccc
gacttcacctggaacacgcgcttctacaccgatggcgtggtcgacaacggcatcctgcgc
ggcaatctgtacgtgcgcggtggaggcgatcccaagctggtgctcgagcgcatccaggag
gcctatcttgcgctgcaggccaaaggcgtgcgtgtgatcctgggcgacatggtgctggac
cacagcgccttcgaactgccgttcaccgaccccggtgccttcgatggcgaggccctgcgc
ccctacaacgccacgcccgatgccctgctggtcaacttcaagtcggtcatcctcaccttc
gtgcccgacgtggccagcggcgtggccaccgtgatcagcgagccaccgctggccgggctg
gcgatcgacgccaccgtaccgctctcgcgaggggcctgcggcgactggcgcagcaccgtg
cgggcgcggttcgacgaccccgatgccatccgcttcgaggggcgctatccgcagaactgc
ggtgagctcaagtggcccgtggcctaccagcagccggccagctacgccgcgcgcgccatg
gagggtttgtggcgcgccagcggcggcgccattaccggctccgtgcgcgacggcaccatg
ccggccgaggtcgtgctgctgcacgaaacgcgctccctgccgctttccgacgtgatcgtc
gacgtgaaccgttggagcaacaacgtgatggcgcagcaggtgtttctcaccctggggcaa
ttggcggtgccgcagacgaccatggcccgatccgtggtggtggccgccgggtccgcggcg
gaccgcctggtgccctcacgccccgcgcgtttcgagtactcgcgagaggtggtcaccgat
tggtggcagcgcaccttcggccggcgcgtgcccggcccagtgctggaaaacggatcgggt
ctctcgcgcgacgagcgcgtcacccccgaagccttggcggccttgttgcggcacgccgcg
cgccatccgcaaggcatggcctttgtcgattcgctgtcggtcgtcggcgtcaatggcacg
gcgcagcggctggggcggggtggcaacagcgcggcgcgcggaaacgcctacgtcaagacc
ggcacgctgcgcgatgtgaccggcattgccggctacgtcaacgcgctcaatgggtcgcag
tacgtggtggtggccttcgtcaaccaccccagtgcgcccgccgcgcggcccgcgctggat
gcgctgttggcatggacagcggcgctgcccgactga
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