Hydrogenophaga sp. RAC07: BSY239_3926
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Entry
BSY239_3926 CDS
T04455
Symbol
xth
Name
(GenBank) exodeoxyribonuclease III
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
hyr
Hydrogenophaga sp. RAC07
Pathway
hyr03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
hyr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
BSY239_3926 (xth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hyr03400
]
BSY239_3926 (xth)
Enzymes [BR:
hyr01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
BSY239_3926 (xth)
DNA repair and recombination proteins [BR:
hyr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
BSY239_3926 (xth)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exo_endo_phos
Exo_endo_phos_2
DUF4376
Glyco_hydro_47
Motif
Other DBs
NCBI-ProteinID:
AOF88166
UniProt:
A0A1B3M4X4
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All DBs
Position
complement(4159272..4160063)
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AA seq
263 aa
AA seq
DB search
MFKLTSLNLNGIRSATTKGLETWLTAHQPDCICVQEVKAQELDVAGRFEHLAGLRGHFHF
AQKKGYSGVGVYTRHEPSDVVTGFRCEEFDAEGRYTELRFDTPSRKLSLISAYFPSGSSG
PERQEAKYRFLAAFHPHLMALKGEREFILCGDVNIAHQQADLKNWRSNQKNSGFLPEERA
WMTSLLTDGGLVDVYRRLQPDTTDACYTWWSNRGQAYANNVGWRLDYHLATPALAALART
EHIYKDVKFSDHAPITIGYDLSL
NT seq
792 nt
NT seq
+upstream
nt +downstream
nt
ttgttcaaactgaccagcctcaacctcaacggcatccgctccgccaccaccaaaggcctg
gagacttggctcaccgcgcaccagccggattgtatttgtgtgcaggaggtcaaggcgcag
gagctggacgtggccggccgtttcgagcacctcgccggtctgcgcggccacttccacttt
gcgcagaaaaagggctactcgggcgtgggcgtgtacacccggcacgagcccagcgacgtg
gtcaccggcttccgttgcgaggagttcgacgccgaaggtcgttacaccgaactgcgcttc
gacacaccgagccgcaagctctcgctgatcagcgcctactttcccagcggttcatccggc
cccgaacgccaggaggccaaataccgctttctggcggccttccacccgcacctgatggcg
ctcaagggcgagcgcgaattcatcctgtgcggcgacgtgaacatcgcccaccagcaggcc
gacctgaagaactggcgcagcaaccagaagaacagcggcttcctgcccgaagagcgcgcc
tggatgacctcgctgctcaccgacggcggcctggtcgacgtgtaccgccgtctgcagccc
gacaccaccgatgcctgctacacgtggtggagcaaccgcggccaggcctatgcaaacaac
gtgggctggcggctggattaccacctggccacgccggcgctggcggcgctggcgcgcacg
gaacacatctacaaggacgtgaagttcagcgaccacgcgccgatcacgatcgggtacgac
ctgagcctgtga
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