Helicoverpa zea (corn earworm): 124632623
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Entry
124632623 CDS
T08400
Name
(RefSeq) DNA repair protein complementing XP-C cells homolog
KO
K10838
xeroderma pigmentosum group C-complementing protein
Organism
hze
Helicoverpa zea (corn earworm)
Pathway
hze03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
hze00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
124632623
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hze03400
]
124632623
DNA repair and recombination proteins [BR:
hze03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
XPC-HR23B-CETN2 complex
124632623
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BHD_3
Rad4
BHD_1
BHD_2
Transglut_core
Motif
Other DBs
NCBI-GeneID:
124632623
NCBI-ProteinID:
XP_047023473
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Position
8:6938573..6946188
Genome browser
AA seq
1265 aa
AA seq
DB search
MPTTRKKVIKTVYKDEESEAEGGDFSDSGSDAKISADGESSSDEDAEDDEFDKKNKKSKS
KKTKIIVVKPKFTKSLLRQIKKQERRTTNAGKEEDADIPSSHFCVKDLKDAEKLLPILNL
SESDSSDNESPNASNRTTSTSEPSAEVSQDSSNDNDGMQCQYVWSNNIQENSEEIAQKAF
LELEKHKAKIEETKASLQKYTLKLNSEKESDVKDLLAMGEEVLPEEPEEKIVTKKPKVRK
RKDDSESEIEDWEEVKESKEIPQQGIQLFVEFPDAASRKARKKMDVEMMMKRKINRVKKE
YQVYMHKVHVLCWLGHGNYVSGVLNDQELMAAVLTLVPSKDCYPGERVDMKYVEQITTWY
KDKLTLKQDKHEDKFKPKAPPLKTLLLEQIKSRVVSAKKYLVFIFVIMLRALGLQCRVMF
NFVVLPLKPPSSELCSLATKPKKEKADKPNNAEQPKSPSVKNENKKDEKDKLEAGPSKPK
AKKQKIAQVDGNDDSFLYSDDENIMQVDGSDDTVNARKARDNKRAKASNSNTEKSDNEDV
SPAKVAKTRAGRVAPSKQDTKKVEEKVTSKKLSLKGKNTKEAIVEKVNAVDKPPIESKPQ
KGKNKTALVENKDETKVKTPVKKQAIKNTGEAIVEKDNTKVKTPVKSLTRGQKIKAENID
SSLENKEKSPEKKSTNTRSRVQRNNKTTNANTDNDIIVPKISVTNENAEDVASKYFEETK
PAAKTSRLSRKRSQTTNPDASKTVSKVDDKSKGKVAAKGRTKSAPSAAMEKSKYFEGQMS
KECTPKRTSRQIKKEIKEEDSQRVSHRDLAKPAKGKDDVTKDLVNIIKGRVKDAKLESKK
GLVKGKIKKESDEDSDYLPIEDPKRRNSESDDDFKPTKISPKPSTSRRIDRRVLSSVSSE
DTKKNRTDVWCEIFVEELEQWISVDVIKGKVHSSGDLYSHATHPVCYIVGWDNNNYLKDL
TRRYVPHWNTVTRKVRAETPWWNKAITPWLGPKTARDKEEDEYLDRMQLEAPLPKSIAEY
KNHPLYVLKRHLLKFEALYPPDAAVLGFVRNEPVYARECVYTLHSRDIWLKEAKVVKLGE
KPYKIVKARPKWDRLSNKLITDKPLEIFGPWQVQDYEPPTAENGIVPRNAYGNVELFKEC
MLPKKTVHIKLPGLNRVAKKLNIDCAPAMTGFDFNGGWSHPVYDGFVVCEEFEEIITEAW
VKDQEEQERKELEKIETRVYGNWKRLIKGLLIRERLKNKYGFEDPSTSETTKKSKGPRLV
VKKKS
NT seq
3798 nt
NT seq
+upstream
nt +downstream
nt
atgccgactacaagaaagaaagtgattaaaacagtatacaaagatgaagaaagcgaagct
gagggtggtgatttcagtgattcgggatcagacgcgaagatttctgcagacggtgaatct
agctccgacgaagatgctgaagacgacgagttcgataaaaagaacaaaaaatctaaatct
aaaaaaactaagatcattgttgtgaaacccaagtttacgaaaagcttattgagacaaata
aaaaaacaagaacgtcgaacgacgaacgccggcaaggaagaagacgccgacattccctct
tcacatttttgtgtaaaagatctgaaagatgcagagaaattgctaccaattcttaatttg
tcagaaagtgattccagtgacaatgaatctcctaatgcttctaatagaaccactagtacc
tccgaaccatccgctgaagttagccaagattcaagcaatgacaatgatggtatgcagtgt
caatatgtatggtcaaataacatccaagaaaacagtgaagaaattgcacagaaagctttt
ttggagcttgaaaagcacaaggcaaaaattgaagagactaaagcttcacttcagaagtat
accttaaagctaaactcggaaaaggaatcagacgtgaaggaccttcttgcaatgggagaa
gaagttttacctgaagaacctgaagaaaaaattgtaacaaagaaacccaaggttagaaaa
cgtaaagatgacagcgaatctgaaatagaggattgggaagaagtgaaagaatcaaaagaa
atacctcaacaaggcatacaactttttgtcgagttccctgatgctgcgagcaggaaagca
agaaaaaaaatggacgttgaaatgatgatgaaaaggaaaataaatcgcgttaaaaaagaa
tatcaagtttacatgcataaggtacatgttttatgttggttaggccacggaaattatgtg
agcggtgttttgaatgaccaggagctcatggcagcagtattaactctagtcccatcgaaa
gattgctatcctggagagagagtagacatgaaatatgttgaacaaatcacaacttggtac
aaagacaaactaacactaaaacaagacaaacatgaagataaattcaaaccaaaagcccca
cctcttaaaactttattattagaacaaataaaaagtagagttgtatctgcaaaaaaatat
ttagttttcatatttgttatcatgttacgagcattgggactacaatgtcgtgttatgttt
aactttgttgtactgcccctaaaaccaccgagttctgaactttgttctcttgctacaaag
ccaaaaaaagaaaaggctgataagcccaataacgctgagcagcccaagtccccatccgta
aaaaacgagaataagaaagatgaaaaagataagctagaagctggtccatcaaagcccaaa
gccaaaaaacaaaaaattgctcaagtagatggaaatgacgacagctttctttatagtgat
gatgaaaatataatgcaagttgacggtagtgatgataccgtgaatgctagaaaagctaga
gataataaacgagcaaaagcatctaactcgaatacagaaaagtctgacaatgaagatgta
tcaccagcaaaagtagctaaaactcgagcaggtcgcgttgcaccttcaaaacaggataca
aaaaaagttgaagaaaaagttacttcaaaaaaattatcactgaaaggaaaaaatactaaa
gaagctattgtagagaaagttaatgctgttgataaaccacctattgaaagcaagcctcag
aaaggaaaaaataaaacagctttagtggaaaataaagacgaaacaaaagttaaaacacct
gttaaaaaacaggcaataaagaatactggagaagcaatcgttgagaaagataatacaaaa
gttaaaacacctgtcaaaagcttaacacgtggacaaaaaataaaagctgaaaatattgac
agttcattggaaaacaaagaaaaaagtcctgaaaagaaatcaactaacaccagaagtagg
gtgcaaagaaataataaaactacgaatgctaacactgataatgacattattgttcctaaa
atatcagtaactaatgagaatgcagaagatgtggcaagtaaatactttgaagagacaaaa
ccggcagctaaaactagtcgtttatcaagaaaacgttcacaaaccactaatcctgatgct
tccaaaactgttagtaaagttgatgataaaagtaagggtaaagttgcagctaaaggccga
acaaagagcgctcctagtgcagcaatggaaaaaagcaaatattttgaaggacaaatgtca
aaagaatgtactcctaaaagaacttcaagacaaataaaaaaagaaattaaagaagaagat
agccaaagggtcagccatagggatcttgcaaaacctgcgaaaggaaaagatgatgttact
aaggatttggtaaatatcatcaaaggccgggtcaaagatgcaaaattggaatcaaagaaa
ggattggttaaaggaaaaatcaagaaagaatctgatgaagacagtgattatttaccaatt
gaggatcctaaacgacgtaactctgagagtgatgatgatttcaagcccaccaaaattagc
cccaagccgagcacaagtcgccgcatagaccgacgagtcctatcatcagtttccagcgaa
gataccaagaagaaccgaactgacgtgtggtgcgaaatatttgttgaagaacttgaacag
tggatctctgttgatgttatcaaagggaaagttcactcttctggtgacctttatagtcat
gccacacatcctgtgtgctacatagttggctgggacaacaacaactacttaaaggatttg
acacgtagatacgtacctcattggaacacagttactcgtaaggttcgcgctgaaactcct
tggtggaacaaggccatcacgccctggcttggaccaaagactgcgagggataaggaagag
gatgaatacctggatagaatgcagttagaagcgccgttgcccaagagtattgctgaatat
aaaaaccatccgttgtacgtgttaaagcggcatttgcttaagttcgaagctctgtacccg
cctgacgctgctgtgctcgggtttgttcgcaacgaaccagtgtatgcgcgagagtgcgta
tacacacttcactccagagacatatggcttaaggaagctaaagttgtgaaactgggagaa
aaaccttataaaatcgttaaagcacgccctaaatgggataggctttcaaataaactgata
actgataaacctctggaaatatttggaccttggcaagtacaagattacgaaccaccaact
gcagaaaacggcatagtacctcgcaatgcttacggcaatgttgaactgttcaaagaatgc
atgctgcctaagaagactgttcatataaagttgccgggcttgaacagagtagccaagaaa
ctgaacatagattgtgcgcccgcgatgaccgggttcgatttcaacggtggatggtcccac
cctgtatacgacggattcgtggtttgcgaagaatttgaggaaatcattactgaggcgtgg
gtaaaggatcaagaagaacaagaacgtaaagaattagaaaaaatcgaaacaagggtttat
ggtaactggaagaggttgattaagggcttgttgattcgtgaacgtctaaagaataaatac
gggtttgaggaccctagcacgtcagaaactacaaaaaaatctaaaggaccaagattggtt
gtgaagaaaaaatcatga
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